RNA–Protein interactions for RNA: YKL139W

CTK1, Transcript of Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK1, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK1YKL139W IRC21Q04772 201 aa1.77□□□□□ -2.13
CTK1YKL139W YLR042CQ07990 161 aa1.77□□□□□ -2.13
CTK1YKL139W YOR097CQ12274 175 aaPredicted RBP1.77□□□□□ -2.13
CTK1YKL139W HIR3P47171 1648 aa1.77□□□□□ -2.13
CTK1YKL139W RPL36BO14455 100 aaKnown RBP1.76□□□□□ -2.13
CTK1YKL139W RPL36AP05745 100 aaPredicted RBP1.76□□□□□ -2.13
CTK1YKL139W HAP2P06774 265 aa1.76□□□□□ -2.13
CTK1YKL139W ARL3Q02804 198 aa1.76□□□□□ -2.13
CTK1YKL139W LCL2Q08045 131 aa1.76□□□□□ -2.13
CTK1YKL139W KTI11Q3E840 82 aa1.76□□□□□ -2.13
CTK1YKL139W GSP1P32835 219 aaKnown RBP1.76□□□□□ -2.13
CTK1YKL139W SNT2P53127 1403 aa1.75□□□□□ -2.13
CTK1YKL139W YCR099CP25657 155 aa1.75□□□□□ -2.13
CTK1YKL139W YAR029WP39549 74 aa1.75□□□□□ -2.13
CTK1YKL139W RPA190P10964 1664 aaKnown RBP1.74□□□□□ -2.13
CTK1YKL139W FCF2Q12035 217 aaPredicted RBP1.74□□□□□ -2.13
CTK1YKL139W YJL009WP47078 108 aa1.73□□□□□ -2.13
CTK1YKL139W RPL37AP49166 88 aaKnown RBP1.73□□□□□ -2.13
CTK1YKL139W YLR194CQ05777 254 aa1.73□□□□□ -2.13
CTK1YKL139W RPO31P04051 1460 aa1.73□□□□□ -2.13
CTK1YKL139W ROM2P51862 1356 aaKnown RBP1.73□□□□□ -2.13
CTK1YKL139W PDR15Q04182 1529 aaKnown RBP1.73□□□□□ -2.13
CTK1YKL139W TDA2P40045 126 aa1.72□□□□□ -2.13
CTK1YKL139W PAM16P42949 149 aa1.72□□□□□ -2.13
CTK1YKL139W RUB1Q03919 77 aa1.72□□□□□ -2.13
CTK1YKL139W YOR072WQ08486 104 aa1.72□□□□□ -2.13
CTK1YKL139W IRA2P19158 3079 aa1.72□□□□□ -2.13
CTK1YKL139W NTE1Q04958 1679 aa1.72□□□□□ -2.13
CTK1YKL139W CDC25P04821 1589 aa1.72□□□□□ -2.13
CTK1YKL139W YSF3P0C074 85 aaPredicted RBP1.72□□□□□ -2.13
CTK1YKL139W YJL197C-AP0C5P0 93 aa1.72□□□□□ -2.13
CTK1YKL139W MGR2Q02889 113 aa1.72□□□□□ -2.13
CTK1YKL139W SLH1P53327 1967 aaKnown RBP1.71□□□□□ -2.14
CTK1YKL139W RPS22AP0C0W1 130 aaKnown RBP1.71□□□□□ -2.14
CTK1YKL139W EMP24P32803 203 aaKnown RBP1.71□□□□□ -2.14
CTK1YKL139W PAU12P53343 120 aa1.71□□□□□ -2.14
CTK1YKL139W YIL014C-AQ02598 104 aa1.71□□□□□ -2.14
CTK1YKL139W HPA2Q06592 156 aa1.71□□□□□ -2.14
CTK1YKL139W RPS22BQ3E7Y3 130 aaKnown RBP1.71□□□□□ -2.14
CTK1YKL139W SPP41P38904 1435 aa1.7□□□□□ -2.14
CTK1YKL139W YER039C-AP0CD97 72 aa1.7□□□□□ -2.14
CTK1YKL139W YHR130CP38834 111 aa1.7□□□□□ -2.14
CTK1YKL139W RTR2Q12378 196 aa1.7□□□□□ -2.14
CTK1YKL139W DNF2Q12675 1612 aa1.7□□□□□ -2.14
CTK1YKL139W YPL261CQ08976 102 aa1.69□□□□□ -2.14
CTK1YKL139W GSC2P40989 1895 aa1.68□□□□□ -2.14
CTK1YKL139W OST5Q92316 86 aa1.68□□□□□ -2.14
CTK1YKL139W IRA1P18963 3092 aa1.68□□□□□ -2.14
CTK1YKL139W TOR2P32600 2474 aaKnown RBP1.68□□□□□ -2.14
CTK1YKL139W LHP1P33399 275 aaKnown RBP1.68□□□□□ -2.14
CTK1YKL139W YIL163CP40448 117 aa1.68□□□□□ -2.14
CTK1YKL139W YBR013CP38215 129 aa1.67□□□□□ -2.14
CTK1YKL139W YER187WP40102 141 aa1.67□□□□□ -2.14
CTK1YKL139W MIC27P50945 234 aa1.67□□□□□ -2.14
CTK1YKL139W MDN1Q12019 4910 aaKnown RBP1.67□□□□□ -2.14
CTK1YKL139W FIT3Q08907 204 aa1.66□□□□□ -2.14
CTK1YKL139W GEA2P39993 1459 aaKnown RBP1.66□□□□□ -2.14
CTK1YKL139W HFA1P32874 2273 aa1.65□□□□□ -2.15
CTK1YKL139W HHY1P39982 102 aa1.65□□□□□ -2.15
CTK1YKL139W YLR365WQ7LIF2 110 aa1.65□□□□□ -2.15
CTK1YKL139W MED11Q99278 115 aa1.65□□□□□ -2.15
CTK1YKL139W PCC1Q3E833 88 aa1.64□□□□□ -2.15
CTK1YKL139W BPT1P14772 1559 aa1.64□□□□□ -2.15
CTK1YKL139W COX23P38824 151 aa1.64□□□□□ -2.15
CTK1YKL139W YER137CP40083 148 aaKnown RBP1.64□□□□□ -2.15
CTK1YKL139W COA6Q3E846 104 aa1.64□□□□□ -2.15
CTK1YKL139W RPL22AP05749 121 aaKnown RBP1.63□□□□□ -2.15
CTK1YKL139W PAU2P32612 120 aa1.63□□□□□ -2.15
CTK1YKL139W POR2P40478 281 aa1.63□□□□□ -2.15
CTK1YKL139W YIR020CP40575 100 aa1.63□□□□□ -2.15
CTK1YKL139W RPL22BP56628 122 aaKnown RBP1.63□□□□□ -2.15
CTK1YKL139W DAD1Q12248 94 aa1.63□□□□□ -2.15
CTK1YKL139W THO2P53552 1597 aaKnown RBP1.63□□□□□ -2.15
CTK1YKL139W ESC1Q03661 1658 aaKnown RBP1.62□□□□□ -2.15
CTK1YKL139W SRX1P36077 127 aa1.62□□□□□ -2.15
CTK1YKL139W YHR213W-BQ8TGK1 99 aa1.62□□□□□ -2.15
CTK1YKL139W PAU24P38155 120 aa1.61□□□□□ -2.15
CTK1YKL139W SNN1P48232 102 aa1.61□□□□□ -2.15
CTK1YKL139W MVB12P42939 101 aa1.6□□□□□ -2.15
CTK1YKL139W YGR164WP53291 111 aa1.6□□□□□ -2.15
CTK1YKL139W YLR285C-AQ3E771 56 aa1.6□□□□□ -2.15
CTK1YKL139W HUG1Q6Q5K6 68 aa1.6□□□□□ -2.15
CTK1YKL139W GTT1P40582 234 aa1.59□□□□□ -2.15
CTK1YKL139W ENV10Q99382 181 aa1.59□□□□□ -2.15
CTK1YKL139W CYB5P40312 120 aa1.59□□□□□ -2.16
CTK1YKL139W RPS12P48589 143 aaKnown RBP1.59□□□□□ -2.16
CTK1YKL139W RPL37BP51402 88 aaKnown RBP1.59□□□□□ -2.16
CTK1YKL139W YCF1P39109 1515 aaKnown RBP1.58□□□□□ -2.16
CTK1YKL139W RGI1P40043 161 aaPredicted RBP1.58□□□□□ -2.16
CTK1YKL139W GNA1P43577 159 aaPredicted RBP1.58□□□□□ -2.16
CTK1YKL139W OCA6Q12454 224 aa1.58□□□□□ -2.16
CTK1YKL139W MRPL31P14063 131 aaPredicted RBP1.57□□□□□ -2.16
CTK1YKL139W ICS3P47034 131 aa1.57□□□□□ -2.16
CTK1YKL139W PEP1P32319 1579 aa1.57□□□□□ -2.16
CTK1YKL139W TSC11P40061 1430 aa1.56□□□□□ -2.16
CTK1YKL139W YEA6P39953 335 aa1.56□□□□□ -2.16
CTK1YKL139W YMR141CP40211 102 aa1.56□□□□□ -2.16
CTK1YKL139W HUR1P45820 110 aa1.56□□□□□ -2.16
CTK1YKL139W YLR363W-AQ3E747 85 aa1.56□□□□□ -2.16
CTK1YKL139W TY4B-JP47024 1803 aa1.56□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 41.4 ms