RNA–Protein interactions for RNA: YJR060W

CBF1, Transcript of Basic helix-loop-helix (bHLH) protein, yeastyeast

Gene CBF1, Length 1,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF1YJR060W HSP10P38910 106 aa3.92□□□□□ -1.78
CBF1YJR060W DAD4P69851 72 aa3.92□□□□□ -1.78
CBF1YJR060W NAT3Q06504 195 aa3.92□□□□□ -1.78
CBF1YJR060W YCR075W-AQ3E830 75 aa3.92□□□□□ -1.78
CBF1YJR060W VAR1P02381 398 aa3.91□□□□□ -1.78
CBF1YJR060W YMR141CP40211 102 aa3.91□□□□□ -1.78
CBF1YJR060W YFR045WP43617 309 aa3.91□□□□□ -1.78
CBF1YJR060W DAD3P69850 94 aa3.91□□□□□ -1.78
CBF1YJR060W APS2Q00381 147 aa3.91□□□□□ -1.78
CBF1YJR060W DCN1Q12395 269 aa3.91□□□□□ -1.78
CBF1YJR060W FMP49A0A023PZB3 126 aa3.9□□□□□ -1.79
CBF1YJR060W ADH3P07246 375 aaKnown RBP3.9□□□□□ -1.79
CBF1YJR060W RPL16BP26785 198 aaKnown RBP3.9□□□□□ -1.79
CBF1YJR060W KTI12P34253 313 aaKnown RBP3.9□□□□□ -1.79
CBF1YJR060W SRP14P38985 146 aa3.9□□□□□ -1.79
CBF1YJR060W HIT1P46973 164 aa3.9□□□□□ -1.79
CBF1YJR060W BNS1P50084 137 aa3.9□□□□□ -1.79
CBF1YJR060W YGR026WP53217 278 aa3.9□□□□□ -1.79
CBF1YJR060W YDR366CP87287 132 aa3.9□□□□□ -1.79
CBF1YJR060W GIM5Q04493 163 aa3.9□□□□□ -1.79
CBF1YJR060W POM33Q12164 279 aa3.9□□□□□ -1.79
CBF1YJR060W YLR118CQ12354 227 aa3.9□□□□□ -1.79
CBF1YJR060W YMR230W-AQ3E7B5 62 aa3.9□□□□□ -1.79
CBF1YJR060W SAL1D6W196 494 aa3.89□□□□□ -1.79
CBF1YJR060W RPL31AP0C2H8 113 aaKnown RBP3.89□□□□□ -1.79
CBF1YJR060W ARO2P28777 376 aaKnown RBP3.89□□□□□ -1.79
CBF1YJR060W KRE9P39005 276 aa3.89□□□□□ -1.79
CBF1YJR060W YFR035CP43608 114 aa3.89□□□□□ -1.79
CBF1YJR060W MGA1P53050 456 aa3.89□□□□□ -1.79
CBF1YJR060W SGF11Q03067 99 aa3.89□□□□□ -1.79
CBF1YJR060W SNO1Q03144 224 aa3.89□□□□□ -1.79
CBF1YJR060W HMRA1P0CY11 126 aa3.88□□□□□ -1.79
CBF1YJR060W CNB1P25296 175 aa3.88□□□□□ -1.79
CBF1YJR060W QRI5P32344 111 aa3.88□□□□□ -1.79
CBF1YJR060W NRG2P38082 220 aa3.88□□□□□ -1.79
CBF1YJR060W PAU7P39545 55 aa3.88□□□□□ -1.79
CBF1YJR060W PEX22P39718 180 aa3.88□□□□□ -1.79
CBF1YJR060W HUA1P40325 198 aa3.88□□□□□ -1.79
CBF1YJR060W YIA6P40556 373 aa3.88□□□□□ -1.79
CBF1YJR060W PAU5P43575 122 aa3.88□□□□□ -1.79
CBF1YJR060W RDS3Q06835 107 aaPredicted RBP3.88□□□□□ -1.79
CBF1YJR060W VAM10Q08474 114 aa3.88□□□□□ -1.79
CBF1YJR060W ATP16Q12165 160 aa3.88□□□□□ -1.79
CBF1YJR060W TIM22Q12328 207 aa3.88□□□□□ -1.79
CBF1YJR060W YCL001W-BQ96VH2 84 aa3.88□□□□□ -1.79
CBF1YJR060W ADH2P00331 348 aaKnown RBP3.87□□□□□ -1.79
CBF1YJR060W NHP6AP11632 93 aaKnown RBP3.87□□□□□ -1.79
CBF1YJR060W MRPL31P14063 131 aaPredicted RBP3.87□□□□□ -1.79
CBF1YJR060W YGL010WP25338 174 aa3.87□□□□□ -1.79
CBF1YJR060W FZF1P32805 299 aa3.87□□□□□ -1.79
CBF1YJR060W RPB11P38902 120 aa3.87□□□□□ -1.79
CBF1YJR060W PGD1P40356 397 aa3.87□□□□□ -1.79
CBF1YJR060W PAU15P40585 124 aa3.87□□□□□ -1.79
CBF1YJR060W YAR1P46683 200 aa3.87□□□□□ -1.79
CBF1YJR060W YPS5P53057 165 aa3.87□□□□□ -1.79
CBF1YJR060W BRP1P53194 125 aa3.87□□□□□ -1.79
CBF1YJR060W ZEO1Q08245 113 aa3.87□□□□□ -1.79
CBF1YJR060W CSM4Q08955 156 aa3.87□□□□□ -1.79
CBF1YJR060W SNU23Q12368 194 aaPredicted RBP3.87□□□□□ -1.79
CBF1YJR060W YOL085CQ99345 113 aa3.87□□□□□ -1.79
CBF1YJR060W Q0255P03881 472 aa3.86□□□□□ -1.79
CBF1YJR060W NTF2P33331 125 aaKnown RBP3.86□□□□□ -1.79
CBF1YJR060W YBR090CP38253 122 aa3.86□□□□□ -1.79
CBF1YJR060W OXA1P39952 402 aa3.86□□□□□ -1.79
CBF1YJR060W VMA21P41806 77 aa3.86□□□□□ -1.79
CBF1YJR060W DIA1P54005 336 aa3.86□□□□□ -1.79
CBF1YJR060W AIM34Q03673 198 aa3.86□□□□□ -1.79
CBF1YJR060W GTO3Q04806 366 aa3.86□□□□□ -1.79
CBF1YJR060W YBR200W-AQ3E755 54 aa3.86□□□□□ -1.79
CBF1YJR060W YCR001WP25347 104 aa3.85□□□□□ -1.79
CBF1YJR060W ATG8P38182 117 aaRIP-Chip data3.85□□□□□ -1.79not detected
CBF1YJR060W IRC22P40006 225 aa3.85□□□□□ -1.79
CBF1YJR060W HHO1P53551 258 aa3.85□□□□□ -1.79
CBF1YJR060W HAL1Q01766 294 aa3.85□□□□□ -1.79
CBF1YJR060W GPI19Q04082 140 aa3.85□□□□□ -1.79
CBF1YJR060W RPL27AP0C2H6 136 aaKnown RBP3.84□□□□□ -1.79
CBF1YJR060W CUP2P15315 225 aa3.84□□□□□ -1.79
CBF1YJR060W YER085CP40058 173 aa3.84□□□□□ -1.79
CBF1YJR060W YGR017WP53210 297 aa3.84□□□□□ -1.79
CBF1YJR060W THG1P53215 237 aaKnown RBP3.84□□□□□ -1.79
CBF1YJR060W ARC18Q05933 178 aaKnown RBP3.84□□□□□ -1.79
CBF1YJR060W YGR240C-AQ3E786 66 aa3.84□□□□□ -1.79
CBF1YJR060W MRPL28P36527 147 aa3.83□□□□□ -1.8
CBF1YJR060W YHR140WP38842 239 aa3.83□□□□□ -1.8
CBF1YJR060W SUR2P38992 349 aa3.83□□□□□ -1.8
CBF1YJR060W YNR034W-AQ3E841 98 aa3.83□□□□□ -1.8
CBF1YJR060W RRT13P40042 185 aa3.82□□□□□ -1.8
CBF1YJR060W YNL217WP40152 326 aa3.82□□□□□ -1.8
CBF1YJR060W DAN1P47178 298 aa3.82□□□□□ -1.8
CBF1YJR060W DXO1Q06349 442 aa3.82□□□□□ -1.8
CBF1YJR060W PAU19P0CE85 124 aa3.81□□□□□ -1.8
CBF1YJR060W PAU21P0CE86 164 aa3.81□□□□□ -1.8
CBF1YJR060W PAU22P0CE87 164 aa3.81□□□□□ -1.8
CBF1YJR060W PAU3P25610 124 aa3.81□□□□□ -1.8
CBF1YJR060W SPT4P32914 102 aaPredicted RBP3.81□□□□□ -1.8
CBF1YJR060W PET8P38921 284 aa3.81□□□□□ -1.8
CBF1YJR060W TEM1P38987 245 aa3.81□□□□□ -1.8
CBF1YJR060W ERI1P62651 68 aaKnown RBP3.81□□□□□ -1.8
CBF1YJR060W TVP18Q04767 167 aa3.81□□□□□ -1.8
CBF1YJR060W YLR042CQ07990 161 aa3.81□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 58.2 ms