RNA–Protein interactions for RNA: YIR034C

LYS1, Transcript of Saccharopine dehydrogenase (NAD+, L-lysine-forming), yeast

Gene LYS1, Length 1,122 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LYS1	YIR034C	TIM22	Q12328	207 aa		4.93	□□□□□ -1.62
LYS1	YIR034C	POR1	P04840	283 aa	Known RBP	4.92	□□□□□ -1.62
LYS1	YIR034C	RPL27A	P0C2H6	136 aa	Known RBP	4.92	□□□□□ -1.62
LYS1	YIR034C	MDM10	P18409	493 aa		4.92	□□□□□ -1.62
LYS1	YIR034C	MIC26	P50087	233 aa		4.92	□□□□□ -1.62
LYS1	YIR034C	THG1	P53215	237 aa	Known RBP	4.92	□□□□□ -1.62
LYS1	YIR034C	MRPS8	Q03799	155 aa		4.92	□□□□□ -1.62
LYS1	YIR034C	GTO3	Q04806	366 aa		4.92	□□□□□ -1.62
LYS1	YIR034C	UTP20	P35194	2493 aa	Known RBP	4.91	□□□□□ -1.62
LYS1	YIR034C	SDS23	P53172	527 aa		4.91	□□□□□ -1.62
LYS1	YIR034C	YDR274C	P87283	123 aa		4.91	□□□□□ -1.62
LYS1	YIR034C	ZRT1	P32804	376 aa		4.9	□□□□□ -1.63
LYS1	YIR034C	ELF1	P36053	145 aa		4.9	□□□□□ -1.63
LYS1	YIR034C	YHR140W	P38842	239 aa		4.9	□□□□□ -1.63
LYS1	YIR034C	MIG3	P39943	394 aa		4.9	□□□□□ -1.63
LYS1	YIR034C	YGR017W	P53210	297 aa		4.9	□□□□□ -1.63
LYS1	YIR034C	GPI19	Q04082	140 aa		4.9	□□□□□ -1.63
LYS1	YIR034C	GRH1	Q04410	372 aa	Known RBP	4.9	□□□□□ -1.63
LYS1	YIR034C	TVP18	Q04767	167 aa		4.9	□□□□□ -1.63
LYS1	YIR034C	WIP1	Q2V2P8	89 aa		4.9	□□□□□ -1.63
LYS1	YIR034C	DYN1	P36022	4092 aa		4.89	□□□□□ -1.63
LYS1	YIR034C	VAR1	P02381	398 aa		4.89	□□□□□ -1.63
LYS1	YIR034C	RPL23A	P0CX41	137 aa	Known RBP	4.89	□□□□□ -1.63
LYS1	YIR034C	RPL23B	P0CX42	137 aa	Known RBP	4.89	□□□□□ -1.63
LYS1	YIR034C	MLF3	P32047	452 aa		4.89	□□□□□ -1.63
LYS1	YIR034C	ARC18	Q05933	178 aa	Known RBP	4.89	□□□□□ -1.63
LYS1	YIR034C	CNL1	Q06333	122 aa		4.89	□□□□□ -1.63
LYS1	YIR034C	NAT5	Q08689	176 aa		4.89	□□□□□ -1.63
LYS1	YIR034C	SEC4	P07560	215 aa	Known RBP	4.88	□□□□□ -1.63
LYS1	YIR034C	YCR007C	P25354	239 aa		4.88	□□□□□ -1.63
LYS1	YIR034C	AGA1	P32323	725 aa		4.88	□□□□□ -1.63
LYS1	YIR034C	YDR366C	P87287	132 aa		4.88	□□□□□ -1.63
LYS1	YIR034C	FSF1	Q12029	327 aa	Known RBP	4.88	□□□□□ -1.63
LYS1	YIR034C	YCR024C-B	Q3E7Z8	88 aa		4.88	□□□□□ -1.63
LYS1	YIR034C	YOL085C	Q99345	113 aa		4.88	□□□□□ -1.63
LYS1	YIR034C	Q0255	P03881	472 aa		4.87	□□□□□ -1.63
LYS1	YIR034C	RPL2A	P0CX45	254 aa	Known RBP	4.87	□□□□□ -1.63
LYS1	YIR034C	RPL2B	P0CX46	254 aa	Known RBP	4.87	□□□□□ -1.63
LYS1	YIR034C	RPS11A	P0CX47	156 aa	Known RBP	4.87	□□□□□ -1.63
LYS1	YIR034C	RPS11B	P0CX48	156 aa	Known RBP	4.87	□□□□□ -1.63
LYS1	YIR034C	PAU16	P35994	123 aa		4.87	□□□□□ -1.63
LYS1	YIR034C	SEC72	P39742	193 aa	Known RBP	4.87	□□□□□ -1.63
LYS1	YIR034C	YGL118C	P53132	145 aa		4.87	□□□□□ -1.63
LYS1	YIR034C	PKR1	Q03880	122 aa	Known RBP	4.87	□□□□□ -1.63
LYS1	YIR034C	PAU23	Q07987	124 aa		4.87	□□□□□ -1.63
LYS1	YIR034C	PAU17	Q12370	124 aa		4.87	□□□□□ -1.63
LYS1	YIR034C	TMA7	Q3E764	64 aa	Known RBP	4.87	□□□□□ -1.63
LYS1	YIR034C	AIM29	P36154	155 aa		4.86	□□□□□ -1.63
LYS1	YIR034C	MSC3	Q05812	728 aa		4.86	□□□□□ -1.63
LYS1	YIR034C	CYC7	P00045	113 aa		4.85	□□□□□ -1.63
LYS1	YIR034C	CDC40	P40968	455 aa	Predicted RBP	4.85	□□□□□ -1.63
LYS1	YIR034C	YCH1	P42937	148 aa		4.85	□□□□□ -1.63
LYS1	YIR034C	COX12	Q01519	83 aa		4.85	□□□□□ -1.63
LYS1	YIR034C	YLR281C	Q05863	155 aa		4.85	□□□□□ -1.63
LYS1	YIR034C	YLR122C	Q12312	125 aa		4.85	□□□□□ -1.63
LYS1	YIR034C	YBR200W-A	Q3E755	54 aa		4.85	□□□□□ -1.63
LYS1	YIR034C	PRE1	P22141	198 aa	Known RBP	4.84	□□□□□ -1.63
LYS1	YIR034C	RPL16B	P26785	198 aa	Known RBP	4.84	□□□□□ -1.63
LYS1	YIR034C	BRP1	P53194	125 aa		4.84	□□□□□ -1.63
LYS1	YIR034C	VPS71	Q03433	280 aa		4.84	□□□□□ -1.63
LYS1	YIR034C	AIM34	Q03673	198 aa		4.84	□□□□□ -1.63
LYS1	YIR034C	RUB1	Q03919	77 aa		4.84	□□□□□ -1.63
LYS1	YIR034C	TPT1	Q12272	230 aa	Known RBP	4.84	□□□□□ -1.63
LYS1	YIR034C	YCR075W-A	Q3E830	75 aa		4.84	□□□□□ -1.63
LYS1	YIR034C	YBR126W-A	Q8TGU7	68 aa		4.84	□□□□□ -1.63
LYS1	YIR034C	POP7	P38291	140 aa		4.83	□□□□□ -1.64
LYS1	YIR034C	RPF1	P38805	295 aa	Known RBP	4.83	□□□□□ -1.64
LYS1	YIR034C	TEM1	P38987	245 aa		4.83	□□□□□ -1.64
LYS1	YIR034C	YER134C	P40081	178 aa		4.83	□□□□□ -1.64
LYS1	YIR034C	DUO1	P53168	247 aa	Known RBP	4.83	□□□□□ -1.64
LYS1	YIR034C	HTL1	Q9URQ5	78 aa		4.83	□□□□□ -1.64
LYS1	YIR034C	RPL42A	P0CX27	106 aa	Known RBP	4.82	□□□□□ -1.64
LYS1	YIR034C	RPL42B	P0CX28	106 aa	Known RBP	4.82	□□□□□ -1.64
LYS1	YIR034C	KTI12	P34253	313 aa	Known RBP	4.82	□□□□□ -1.64
LYS1	YIR034C	VHS2	P40463	436 aa		4.82	□□□□□ -1.64
LYS1	YIR034C	ANB1	P19211	157 aa		4.81	□□□□□ -1.64
LYS1	YIR034C	GSP1	P32835	219 aa	Known RBP	4.81	□□□□□ -1.64
LYS1	YIR034C	GSP2	P32836	220 aa	Known RBP	4.81	□□□□□ -1.64
LYS1	YIR034C	YKR032W	P36127	104 aa		4.81	□□□□□ -1.64
LYS1	YIR034C	RRT13	P40042	185 aa		4.81	□□□□□ -1.64
LYS1	YIR034C	MSL1	P40567	111 aa	Predicted RBP	4.81	□□□□□ -1.64
LYS1	YIR034C	CIN5	P40917	295 aa		4.81	□□□□□ -1.64
LYS1	YIR034C	HAC1	P41546	238 aa		4.81	□□□□□ -1.64
LYS1	YIR034C	YFR035C	P43608	114 aa		4.81	□□□□□ -1.64
LYS1	YIR034C	YML079W	Q03629	201 aa		4.81	□□□□□ -1.64
LYS1	YIR034C	YDL157C	Q12082	118 aa		4.81	□□□□□ -1.64
LYS1	YIR034C	MRP49	P32388	137 aa		4.8	□□□□□ -1.64
LYS1	YIR034C	YNL200C	P40165	246 aa	Known RBP	4.8	□□□□□ -1.64
LYS1	YIR034C	SAL1	D6W196	494 aa		4.79	□□□□□ -1.64
LYS1	YIR034C	PFY1	P07274	126 aa		4.79	□□□□□ -1.64
LYS1	YIR034C	YCR023C	P25351	611 aa		4.79	□□□□□ -1.64
LYS1	YIR034C	PET8	P38921	284 aa		4.79	□□□□□ -1.64
LYS1	YIR034C	YER076C	P40049	302 aa		4.79	□□□□□ -1.64
LYS1	YIR034C	YPS5	P53057	165 aa		4.79	□□□□□ -1.64
LYS1	YIR034C	YGL230C	P53074	147 aa		4.79	□□□□□ -1.64
LYS1	YIR034C	ATP23	P53722	227 aa		4.79	□□□□□ -1.64
LYS1	YIR034C	YIL014C-A	Q02598	104 aa		4.79	□□□□□ -1.64
LYS1	YIR034C	MGR2	Q02889	113 aa		4.79	□□□□□ -1.64
LYS1	YIR034C	YLR042C	Q07990	161 aa		4.79	□□□□□ -1.64
LYS1	YIR034C	YPL257W	Q08974	193 aa		4.79	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 63.2 ms