RNA–Protein interactions for RNA: YIR006C

PAN1, Transcript of Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p, yeastyeast

Gene PAN1, Length 4,443 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAN1YIR006C SRL1Q08673 210 aa3.86□□□□□ -1.79
PAN1YIR006C FCY1Q12178 158 aa3.86□□□□□ -1.79
PAN1YIR006C SEC11P15367 167 aa3.86□□□□□ -1.79
PAN1YIR006C GAR1P28007 205 aaKnown RBP3.86□□□□□ -1.79
PAN1YIR006C ICS2P38284 255 aa3.86□□□□□ -1.79
PAN1YIR006C BET5Q03630 159 aa3.86□□□□□ -1.79
PAN1YIR006C YLR194CQ05777 254 aa3.86□□□□□ -1.79
PAN1YIR006C PRM3Q08931 133 aa3.86□□□□□ -1.79
PAN1YIR006C BOL1Q3E793 110 aa3.86□□□□□ -1.79
PAN1YIR006C CPR1P14832 162 aaKnown RBP3.85□□□□□ -1.79
PAN1YIR006C SED1Q01589 338 aa3.85□□□□□ -1.79
PAN1YIR006C IZH3Q07959 543 aa3.85□□□□□ -1.79
PAN1YIR006C YLR342W-AQ3E810 57 aa3.85□□□□□ -1.79
PAN1YIR006C OXA1P39952 402 aa3.85□□□□□ -1.79
PAN1YIR006C YNL046WP53956 172 aa3.85□□□□□ -1.79
PAN1YIR006C FZF1P32805 299 aa3.84□□□□□ -1.79
PAN1YIR006C EMC6Q12431 108 aa3.84□□□□□ -1.79
PAN1YIR006C RPL28P02406 149 aaKnown RBP3.84□□□□□ -1.79
PAN1YIR006C DDI2P0CH63 225 aa3.84□□□□□ -1.79
PAN1YIR006C DDI3P0CH64 225 aa3.84□□□□□ -1.79
PAN1YIR006C YOX1P34161 385 aa3.84□□□□□ -1.79
PAN1YIR006C YMR141CP40211 102 aa3.84□□□□□ -1.79
PAN1YIR006C TIR1P10863 254 aa3.84□□□□□ -1.8
PAN1YIR006C MSN1P22148 382 aa3.84□□□□□ -1.8
PAN1YIR006C SRP21P32342 167 aa3.84□□□□□ -1.8
PAN1YIR006C YKL102CP34249 101 aa3.84□□□□□ -1.8
PAN1YIR006C MID2P36027 376 aa3.84□□□□□ -1.8
PAN1YIR006C YJL028WP47062 111 aa3.84□□□□□ -1.8
PAN1YIR006C ERF2Q06551 359 aa3.84□□□□□ -1.8
PAN1YIR006C FLO9P39712 1322 aa3.84□□□□□ -1.8
PAN1YIR006C YPR170W-BP0C5R9 85 aa3.84□□□□□ -1.8
PAN1YIR006C INO2P26798 304 aa3.84□□□□□ -1.8
PAN1YIR006C MRPL49P40858 161 aaPredicted RBP3.84□□□□□ -1.8
PAN1YIR006C YNL217WP40152 326 aa3.83□□□□□ -1.8
PAN1YIR006C BNA1P47096 177 aa3.83□□□□□ -1.8
PAN1YIR006C AIM34Q03673 198 aa3.83□□□□□ -1.8
PAN1YIR006C ISD11Q6Q560 94 aa3.83□□□□□ -1.8
PAN1YIR006C YIP3P53633 176 aa3.83□□□□□ -1.8
PAN1YIR006C YIL012WP40551 113 aa3.83□□□□□ -1.8
PAN1YIR006C YFL015CP43578 164 aa3.83□□□□□ -1.8
PAN1YIR006C IRC23Q08416 157 aa3.83□□□□□ -1.8
PAN1YIR006C SHU1P38751 150 aa3.82□□□□□ -1.8
PAN1YIR006C PEX17P40155 199 aa3.82□□□□□ -1.8
PAN1YIR006C LSM6Q06406 86 aaKnown RBP3.82□□□□□ -1.8
PAN1YIR006C SMD1Q02260 146 aaPredicted RBP3.82□□□□□ -1.8
PAN1YIR006C PBI2P0CT04 75 aaKnown RBP3.82□□□□□ -1.8
PAN1YIR006C YCR085WP25650 117 aa3.82□□□□□ -1.8
PAN1YIR006C YFL065CP43539 102 aa3.82□□□□□ -1.8
PAN1YIR006C DCV1P43595 202 aa3.82□□□□□ -1.8
PAN1YIR006C HUR1P45820 110 aa3.82□□□□□ -1.8
PAN1YIR006C OST2P46964 130 aa3.82□□□□□ -1.8
PAN1YIR006C YGR219WP53307 113 aa3.82□□□□□ -1.8
PAN1YIR006C YPR203WQ08994 102 aa3.82□□□□□ -1.8
PAN1YIR006C RPL15AP05748 204 aaKnown RBP3.81□□□□□ -1.8
PAN1YIR006C YMR105W-AQ8TGS8 64 aa3.81□□□□□ -1.8
PAN1YIR006C ATP15P21306 62 aa3.81□□□□□ -1.8
PAN1YIR006C UGX2P32772 223 aa3.81□□□□□ -1.8
PAN1YIR006C ADH5P38113 351 aaKnown RBP3.81□□□□□ -1.8
PAN1YIR006C ALG13P53178 202 aa3.81□□□□□ -1.8
PAN1YIR006C DGA1Q08650 418 aa3.81□□□□□ -1.8
PAN1YIR006C TRP1P00912 224 aa3.81□□□□□ -1.8
PAN1YIR006C RPL16AP26784 199 aaKnown RBP3.8□□□□□ -1.8
PAN1YIR006C RTG1P32607 177 aa3.8□□□□□ -1.8
PAN1YIR006C SRP14P38985 146 aa3.8□□□□□ -1.8
PAN1YIR006C SIM1P40472 476 aa3.8□□□□□ -1.8
PAN1YIR006C CAX4P53223 239 aa3.8□□□□□ -1.8
PAN1YIR006C YIL014C-AQ02598 104 aa3.8□□□□□ -1.8
PAN1YIR006C MRPL23Q12487 163 aaPredicted RBP3.8□□□□□ -1.8
PAN1YIR006C MTC6P38849 526 aa3.8□□□□□ -1.8
PAN1YIR006C YKR041WP36134 250 aa3.8□□□□□ -1.8
PAN1YIR006C GZF3P42944 551 aaKnown RBP3.8□□□□□ -1.8
PAN1YIR006C AIM11P87275 137 aa3.8□□□□□ -1.8
PAN1YIR006C YPR053CQ6Q5F3 151 aa3.8□□□□□ -1.8
PAN1YIR006C MIG1P27705 504 aa3.79□□□□□ -1.8
PAN1YIR006C SVP26P38869 228 aa3.79□□□□□ -1.8
PAN1YIR006C RPL38P49167 78 aaKnown RBP3.79□□□□□ -1.8
PAN1YIR006C YTH1Q06102 208 aaPredicted RBP3.79□□□□□ -1.8
PAN1YIR006C TMC1Q08422 150 aaPredicted RBP3.79□□□□□ -1.8
PAN1YIR006C MSL5Q12186 476 aaKnown RBP RIP-Chip data3.79□□□□□ -1.8not detected
PAN1YIR006C RPL11AP0C0W9 174 aaKnown RBP3.79□□□□□ -1.8
PAN1YIR006C CWP2P43497 92 aa3.79□□□□□ -1.8
PAN1YIR006C YFL051CP43552 160 aa3.79□□□□□ -1.8
PAN1YIR006C PBP4Q07362 185 aaKnown RBP3.79□□□□□ -1.8
PAN1YIR006C RPL11BQ3E757 174 aaPredicted RBP3.79□□□□□ -1.8
PAN1YIR006C SPS100P13130 326 aa3.79□□□□□ -1.8
PAN1YIR006C YKL069WP36088 180 aa3.79□□□□□ -1.8
PAN1YIR006C YDR029WQ12111 104 aa3.79□□□□□ -1.8
PAN1YIR006C YCR022CP25620 114 aa3.79□□□□□ -1.8
PAN1YIR006C MTR2P34232 184 aaKnown RBP3.79□□□□□ -1.8
PAN1YIR006C YIA6P40556 373 aa3.79□□□□□ -1.8
PAN1YIR006C FIP1P45976 327 aa3.79□□□□□ -1.8
PAN1YIR006C YGR018CP53211 109 aa3.79□□□□□ -1.8
PAN1YIR006C PRM7Q12459 698 aa3.79□□□□□ -1.8
PAN1YIR006C ERS1P17261 260 aa3.78□□□□□ -1.8
PAN1YIR006C YFR057WP43625 151 aa3.78□□□□□ -1.8
PAN1YIR006C YDR042CQ03205 200 aa3.78□□□□□ -1.8
PAN1YIR006C RPL26AP05743 127 aaKnown RBP3.78□□□□□ -1.8
PAN1YIR006C RPA12P32529 125 aaKnown RBP3.78□□□□□ -1.8
PAN1YIR006C RPL26BP53221 127 aaKnown RBP3.78□□□□□ -1.8
PAN1YIR006C YBR126W-AQ8TGU7 68 aa3.78□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 75.8 ms