RNA–Protein interactions for RNA: YIL143C

SSL2, Transcript of Component of RNA polymerase transcription factor TFIIH holoenzyme, yeastyeast

Gene SSL2, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSL2YIL143C DGA1Q08650 418 aa7□□□□□ -1.29
SSL2YIL143C SNU13P39990 126 aaKnown RBP6.99□□□□□ -1.29
SSL2YIL143C YNL234WP53857 426 aa6.99□□□□□ -1.29
SSL2YIL143C SED1Q01589 338 aa6.99□□□□□ -1.29
SSL2YIL143C YMR103CQ04436 120 aa6.99□□□□□ -1.29
SSL2YIL143C IRC23Q08416 157 aa6.99□□□□□ -1.29
SSL2YIL143C YKL044WP36092 106 aa6.99□□□□□ -1.29
SSL2YIL143C MRPL49P40858 161 aaPredicted RBP6.98□□□□□ -1.29
SSL2YIL143C VTS1Q08831 523 aaKnown RBP RIP-Chip data6.98□□□□□ -1.29not detected
SSL2YIL143C JID1Q12350 301 aa6.98□□□□□ -1.29
SSL2YIL143C SBH2P52871 88 aa6.98□□□□□ -1.29
SSL2YIL143C YDL009CQ12210 107 aa6.98□□□□□ -1.29
SSL2YIL143C ECM14P38836 430 aa6.97□□□□□ -1.29
SSL2YIL143C MST28P39552 234 aa6.97□□□□□ -1.29
SSL2YIL143C GLE2P40066 365 aa6.97□□□□□ -1.29
SSL2YIL143C YPL073CP40323 161 aa6.97□□□□□ -1.29
SSL2YIL143C VHS2P40463 436 aa6.97□□□□□ -1.29
SSL2YIL143C MIX17Q03667 156 aa6.97□□□□□ -1.29
SSL2YIL143C GPI19Q04082 140 aa6.97□□□□□ -1.29
SSL2YIL143C LDB16P25587 256 aa6.96□□□□□ -1.29
SSL2YIL143C MOH1P38191 138 aa6.96□□□□□ -1.29
SSL2YIL143C SCW10Q04951 389 aa6.96□□□□□ -1.29
SSL2YIL143C MRPL20P22354 195 aaPredicted RBP6.96□□□□□ -1.3
SSL2YIL143C ELC1Q03071 99 aa6.96□□□□□ -1.3
SSL2YIL143C FCY1Q12178 158 aa6.96□□□□□ -1.3
SSL2YIL143C YOR304C-AO14468 76 aa6.95□□□□□ -1.3
SSL2YIL143C RPL11AP0C0W9 174 aaKnown RBP6.95□□□□□ -1.3
SSL2YIL143C SNF11P38956 169 aa6.95□□□□□ -1.3
SSL2YIL143C OXA1P39952 402 aa6.95□□□□□ -1.3
SSL2YIL143C RPL11BQ3E757 174 aaPredicted RBP6.95□□□□□ -1.3
SSL2YIL143C YLR342W-AQ3E810 57 aa6.95□□□□□ -1.3
SSL2YIL143C YJL027CP47063 138 aaPredicted RBP6.95□□□□□ -1.3
SSL2YIL143C GPI18P38211 433 aa6.94□□□□□ -1.3
SSL2YIL143C YIP1P53039 248 aa6.94□□□□□ -1.3
SSL2YIL143C ATP23P53722 227 aa6.94□□□□□ -1.3
SSL2YIL143C AQY1P0CD91 305 aa6.94□□□□□ -1.3
SSL2YIL143C YHR140WP38842 239 aa6.94□□□□□ -1.3
SSL2YIL143C CYC7P00045 113 aa6.93□□□□□ -1.3
SSL2YIL143C SUR7P54003 302 aa6.93□□□□□ -1.3
SSL2YIL143C YLR296WQ05898 108 aa6.93□□□□□ -1.3
SSL2YIL143C RPL18AP0CX49 186 aaKnown RBP6.93□□□□□ -1.3
SSL2YIL143C RPL18BP0CX50 186 aaKnown RBP6.93□□□□□ -1.3
SSL2YIL143C YER076CP40049 302 aa6.93□□□□□ -1.3
SSL2YIL143C UBC7Q02159 165 aa6.93□□□□□ -1.3
SSL2YIL143C YLR112WQ12130 139 aa6.93□□□□□ -1.3
SSL2YIL143C YBR121C-AP0C5L4 52 aa6.92□□□□□ -1.3
SSL2YIL143C YKR041WP36134 250 aa6.92□□□□□ -1.3
SSL2YIL143C YCL048W-AQ2V2Q2 79 aa6.92□□□□□ -1.3
SSL2YIL143C SPO24Q3E752 67 aa6.92□□□□□ -1.3
SSL2YIL143C MRPL38P35996 138 aaPredicted RBP6.92□□□□□ -1.3
SSL2YIL143C YPT53P36019 220 aa6.92□□□□□ -1.3
SSL2YIL143C YHL037CP38733 133 aa6.92□□□□□ -1.3
SSL2YIL143C MGR2Q02889 113 aa6.92□□□□□ -1.3
SSL2YIL143C HMRA2P0CY13 119 aa6.91□□□□□ -1.3
SSL2YIL143C YCH1P42937 148 aa6.91□□□□□ -1.3
SSL2YIL143C YGR045CP53229 120 aa6.91□□□□□ -1.3
SSL2YIL143C YNL184CP53876 108 aa6.91□□□□□ -1.3
SSL2YIL143C YNL046WP53956 172 aa6.91□□□□□ -1.3
SSL2YIL143C MSA1Q08471 629 aa6.91□□□□□ -1.3
SSL2YIL143C TIM22Q12328 207 aa6.91□□□□□ -1.3
SSL2YIL143C YKL023C-AQ2V2P3 75 aa6.91□□□□□ -1.3
SSL2YIL143C YEL067CP39978 195 aa6.9□□□□□ -1.3
SSL2YIL143C PBP4Q07362 185 aaKnown RBP6.9□□□□□ -1.3
SSL2YIL143C FCF1Q05498 189 aaPredicted RBP6.9□□□□□ -1.31
SSL2YIL143C YPL261CQ08976 102 aa6.9□□□□□ -1.31
SSL2YIL143C WWM1P43582 211 aaKnown RBP6.89□□□□□ -1.31
SSL2YIL143C PFY1P07274 126 aa6.89□□□□□ -1.31
SSL2YIL143C YOL160WQ08321 113 aa6.89□□□□□ -1.31
SSL2YIL143C TRA1P38811 3744 aa6.89□□□□□ -1.31
SSL2YIL143C YER181CP40097 107 aa6.88□□□□□ -1.31
SSL2YIL143C YDL022C-AP0C5L6 82 aa6.88□□□□□ -1.31
SSL2YIL143C IES6P32617 166 aa6.87□□□□□ -1.31
SSL2YIL143C RPL32P38061 130 aaKnown RBP6.87□□□□□ -1.31
SSL2YIL143C YDL186WP48568 277 aa6.87□□□□□ -1.31
SSL2YIL143C YGR025WP53216 100 aa6.87□□□□□ -1.31
SSL2YIL143C LCB3P47013 409 aa6.87□□□□□ -1.31
SSL2YIL143C COA3Q3E7B2 85 aa6.87□□□□□ -1.31
SSL2YIL143C RPS28BP0C0X0 67 aaKnown RBP6.86□□□□□ -1.31
SSL2YIL143C KTI12P34253 313 aaKnown RBP6.86□□□□□ -1.31
SSL2YIL143C YNR077CP53758 84 aa6.86□□□□□ -1.31
SSL2YIL143C RPS28AQ3E7X9 67 aaPredicted RBP6.86□□□□□ -1.31
SSL2YIL143C VAR1P02381 398 aa6.86□□□□□ -1.31
SSL2YIL143C YMR181CQ03231 154 aa6.86□□□□□ -1.31
SSL2YIL143C PRM3Q08931 133 aa6.85□□□□□ -1.31
SSL2YIL143C NHP2P32495 156 aaPredicted RBP6.85□□□□□ -1.31
SSL2YIL143C AGA1P32323 725 aa6.84□□□□□ -1.31
SSL2YIL143C ATX1P38636 73 aa6.84□□□□□ -1.31
SSL2YIL143C TOS6P48560 102 aa6.84□□□□□ -1.31
SSL2YIL143C OST2P46964 130 aa6.83□□□□□ -1.32
SSL2YIL143C YOR097CQ12274 175 aaPredicted RBP6.83□□□□□ -1.32
SSL2YIL143C VTC1P40046 129 aaRIP-Chip data6.83□□□□□ -1.32not detected
SSL2YIL143C INO4P13902 151 aa6.82□□□□□ -1.32
SSL2YIL143C POR2P40478 281 aa6.82□□□□□ -1.32
SSL2YIL143C AIM34Q03673 198 aa6.82□□□□□ -1.32
SSL2YIL143C MET32Q12041 191 aa6.82□□□□□ -1.32
SSL2YIL143C DIF1O13577 133 aa6.82□□□□□ -1.32
SSL2YIL143C YGL260WP53056 76 aa6.82□□□□□ -1.32
SSL2YIL143C ISD11Q6Q560 94 aa6.81□□□□□ -1.32
SSL2YIL143C YOL085CQ99345 113 aa6.81□□□□□ -1.32
SSL2YIL143C SPI1P40092 148 aa6.8□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 154.2 ms