RNA–Protein interactions for RNA: YIL104C

SHQ1, Transcript of Chaperone protein, yeastyeast

Gene SHQ1, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHQ1YIL104C HHO1P53551 258 aa2.39□□□□□ -2.03
SHQ1YIL104C HAL1Q01766 294 aa2.39□□□□□ -2.03
SHQ1YIL104C SMT3Q12306 101 aaKnown RBP2.39□□□□□ -2.03
SHQ1YIL104C UTP23Q12339 254 aaKnown RBP2.39□□□□□ -2.03
SHQ1YIL104C DAD2P36162 133 aa2.38□□□□□ -2.03
SHQ1YIL104C HSP10P38910 106 aa2.38□□□□□ -2.03
SHQ1YIL104C PAU5P43575 122 aa2.38□□□□□ -2.03
SHQ1YIL104C YPS5P53057 165 aa2.38□□□□□ -2.03
SHQ1YIL104C YGR017WP53210 297 aa2.38□□□□□ -2.03
SHQ1YIL104C YGR026WP53217 278 aa2.38□□□□□ -2.03
SHQ1YIL104C FSF1Q12029 327 aaKnown RBP2.38□□□□□ -2.03
SHQ1YIL104C YLL066W-BQ8TGJ7 56 aa2.38□□□□□ -2.03
SHQ1YIL104C POR1P04840 283 aaKnown RBP2.37□□□□□ -2.03
SHQ1YIL104C RPS8AP0CX39 200 aaKnown RBP2.37□□□□□ -2.03
SHQ1YIL104C RPS8BP0CX40 200 aaKnown RBP2.37□□□□□ -2.03
SHQ1YIL104C HMRA1P0CY11 126 aa2.37□□□□□ -2.03
SHQ1YIL104C FRS1P15624 595 aaKnown RBP2.37□□□□□ -2.03
SHQ1YIL104C ELF1P36053 145 aa2.37□□□□□ -2.03
SHQ1YIL104C YHR140WP38842 239 aa2.37□□□□□ -2.03
SHQ1YIL104C RPR2P40571 144 aa2.37□□□□□ -2.03
SHQ1YIL104C DIA1P54005 336 aa2.37□□□□□ -2.03
SHQ1YIL104C YDR366CP87287 132 aa2.37□□□□□ -2.03
SHQ1YIL104C SGF11Q03067 99 aa2.37□□□□□ -2.03
SHQ1YIL104C AIM34Q03673 198 aa2.37□□□□□ -2.03
SHQ1YIL104C UPS3Q04006 179 aa2.37□□□□□ -2.03
SHQ1YIL104C GPI19Q04082 140 aa2.37□□□□□ -2.03
SHQ1YIL104C YLR042CQ07990 161 aa2.37□□□□□ -2.03
SHQ1YIL104C SEC4P07560 215 aaKnown RBP2.37□□□□□ -2.03
SHQ1YIL104C RPL23AP0CX41 137 aaKnown RBP2.37□□□□□ -2.03
SHQ1YIL104C RPL23BP0CX42 137 aaKnown RBP2.37□□□□□ -2.03
SHQ1YIL104C ZRT1P32804 376 aa2.37□□□□□ -2.03
SHQ1YIL104C YNL217WP40152 326 aa2.37□□□□□ -2.03
SHQ1YIL104C CDC40P40968 455 aaPredicted RBP2.37□□□□□ -2.03
SHQ1YIL104C SDS23P53172 527 aa2.37□□□□□ -2.03
SHQ1YIL104C THG1P53215 237 aaKnown RBP2.37□□□□□ -2.03
SHQ1YIL104C RPL27AP0C2H6 136 aaKnown RBP2.36□□□□□ -2.03
SHQ1YIL104C PAU19P0CE85 124 aa2.36□□□□□ -2.03
SHQ1YIL104C PAU21P0CE86 164 aa2.36□□□□□ -2.03
SHQ1YIL104C PAU22P0CE87 164 aa2.36□□□□□ -2.03
SHQ1YIL104C PRE1P22141 198 aaKnown RBP2.36□□□□□ -2.03
SHQ1YIL104C PAU3P25610 124 aa2.36□□□□□ -2.03
SHQ1YIL104C MRPL28P36527 147 aa2.36□□□□□ -2.03
SHQ1YIL104C YNL200CP40165 246 aaKnown RBP2.36□□□□□ -2.03
SHQ1YIL104C YCH1P42937 148 aa2.36□□□□□ -2.03
SHQ1YIL104C KEG1P43614 200 aa2.36□□□□□ -2.03
SHQ1YIL104C YGR149WP48236 432 aa2.36□□□□□ -2.03
SHQ1YIL104C TIM11P81449 96 aaPredicted RBP2.36□□□□□ -2.03
SHQ1YIL104C YIL014C-AQ02598 104 aa2.36□□□□□ -2.03
SHQ1YIL104C DXO1Q06349 442 aa2.36□□□□□ -2.03
SHQ1YIL104C YPR195CQ06594 109 aa2.36□□□□□ -2.03
SHQ1YIL104C CSM4Q08955 156 aa2.36□□□□□ -2.03
SHQ1YIL104C YGR240C-AQ3E786 66 aa2.36□□□□□ -2.03
SHQ1YIL104C UBC5P15732 148 aa2.35□□□□□ -2.03
SHQ1YIL104C COX16P47081 118 aa2.35□□□□□ -2.03
SHQ1YIL104C APS2Q00381 147 aa2.35□□□□□ -2.03
SHQ1YIL104C KTI12P34253 313 aaKnown RBP2.34□□□□□ -2.03
SHQ1YIL104C HOT13P36078 116 aa2.34□□□□□ -2.03
SHQ1YIL104C SUR2P38992 349 aa2.34□□□□□ -2.03
SHQ1YIL104C GTT1P40582 234 aa2.34□□□□□ -2.03
SHQ1YIL104C GIS2P53849 153 aaKnown RBP RIP-Chip data2.34□□□□□ -2.03not detected
SHQ1YIL104C CYT2Q00873 224 aa2.34□□□□□ -2.03
SHQ1YIL104C DGA1Q08650 418 aa2.34□□□□□ -2.03
SHQ1YIL104C SAL1D6W196 494 aa2.33□□□□□ -2.04
SHQ1YIL104C PAU7P39545 55 aa2.33□□□□□ -2.04
SHQ1YIL104C IRC22P40006 225 aa2.33□□□□□ -2.04
SHQ1YIL104C DCV1P43595 202 aa2.33□□□□□ -2.04
SHQ1YIL104C YJL028WP47062 111 aa2.33□□□□□ -2.04
SHQ1YIL104C ARL3Q02804 198 aa2.33□□□□□ -2.04
SHQ1YIL104C GTO3Q04806 366 aa2.33□□□□□ -2.04
SHQ1YIL104C DPP1Q05521 289 aa2.33□□□□□ -2.04
SHQ1YIL104C CRC1Q12289 327 aa2.33□□□□□ -2.04
SHQ1YIL104C RRT15Q3E811 62 aa2.33□□□□□ -2.04
SHQ1YIL104C RPL33AP05744 107 aaKnown RBP2.32□□□□□ -2.04
SHQ1YIL104C PFY1P07274 126 aa2.32□□□□□ -2.04
SHQ1YIL104C AQY1P0CD91 305 aa2.32□□□□□ -2.04
SHQ1YIL104C RPL42AP0CX27 106 aaKnown RBP2.32□□□□□ -2.04
SHQ1YIL104C RPL42BP0CX28 106 aaKnown RBP2.32□□□□□ -2.04
SHQ1YIL104C GSP1P32835 219 aaKnown RBP2.32□□□□□ -2.04
SHQ1YIL104C GSP2P32836 220 aaKnown RBP2.32□□□□□ -2.04
SHQ1YIL104C YER134CP40081 178 aa2.32□□□□□ -2.04
SHQ1YIL104C RPL33BP41056 107 aaKnown RBP2.32□□□□□ -2.04
SHQ1YIL104C YJR146WP47174 117 aa2.32□□□□□ -2.04
SHQ1YIL104C MGR2Q02889 113 aa2.32□□□□□ -2.04
SHQ1YIL104C YDR115WQ04598 105 aa2.32□□□□□ -2.04
SHQ1YIL104C RPS22BQ3E7Y3 130 aaKnown RBP2.32□□□□□ -2.04
SHQ1YIL104C YBR126W-AQ8TGU7 68 aa2.32□□□□□ -2.04
SHQ1YIL104C RPL16AP26784 199 aaKnown RBP2.32□□□□□ -2.04
SHQ1YIL104C YER076CP40049 302 aa2.32□□□□□ -2.04
SHQ1YIL104C YGL088WP53151 121 aa2.32□□□□□ -2.04
SHQ1YIL104C YML108WQ03759 105 aa2.32□□□□□ -2.04
SHQ1YIL104C TVP18Q04767 167 aa2.32□□□□□ -2.04
SHQ1YIL104C FCF1Q05498 189 aaPredicted RBP2.32□□□□□ -2.04
SHQ1YIL104C POM33Q12164 279 aa2.32□□□□□ -2.04
SHQ1YIL104C TMA17Q12513 150 aa2.32□□□□□ -2.04
SHQ1YIL104C YCR075W-AQ3E830 75 aa2.32□□□□□ -2.04
SHQ1YIL104C YPR014CQ6B0W2 109 aa2.32□□□□□ -2.04
SHQ1YIL104C YKR070WP36151 352 aaKnown RBP2.31□□□□□ -2.04
SHQ1YIL104C YBR219CP38317 127 aa2.31□□□□□ -2.04
SHQ1YIL104C PBA1Q05778 276 aa2.31□□□□□ -2.04
SHQ1YIL104C YLR112WQ12130 139 aa2.31□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms