RNA–Protein interactions for RNA: YHR154W

RTT107, Transcript of Protein implicated in Mms22-dependent DNA repair during S phase, yeastyeast

Gene RTT107, Length 3,213 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT107YHR154W HUT1Q12520 339 aa1.46□□□□□ -2.18
RTT107YHR154W YLR099W-AQ3E798 87 aa1.46□□□□□ -2.18
RTT107YHR154W CTR2P38865 189 aa1.45□□□□□ -2.18
RTT107YHR154W KEI1Q06346 221 aa1.45□□□□□ -2.18
RTT107YHR154W ZEO1Q08245 113 aa1.45□□□□□ -2.18
RTT107YHR154W ATO3Q12359 275 aa1.45□□□□□ -2.18
RTT107YHR154W RPL13AQ12690 199 aaPredicted RBP1.45□□□□□ -2.18
RTT107YHR154W COA6Q3E846 104 aa1.45□□□□□ -2.18
RTT107YHR154W NSA2P40078 261 aaKnown RBP1.45□□□□□ -2.18
RTT107YHR154W GEP7P53171 287 aa1.45□□□□□ -2.18
RTT107YHR154W ELC1Q03071 99 aa1.45□□□□□ -2.18
RTT107YHR154W YHP1Q04116 353 aa1.45□□□□□ -2.18
RTT107YHR154W YMR090WQ04304 227 aaKnown RBP1.45□□□□□ -2.18
RTT107YHR154W UGX2P32772 223 aa1.45□□□□□ -2.18
RTT107YHR154W UMP1P38293 148 aa1.45□□□□□ -2.18
RTT107YHR154W LIP1Q03579 150 aa1.45□□□□□ -2.18
RTT107YHR154W YMR082CQ04276 118 aa1.45□□□□□ -2.18
RTT107YHR154W NAT3Q06504 195 aa1.45□□□□□ -2.18
RTT107YHR154W SYM1Q06563 197 aa1.45□□□□□ -2.18
RTT107YHR154W GPA2P10823 449 aa1.44□□□□□ -2.18
RTT107YHR154W MRPL44P19956 98 aa1.44□□□□□ -2.18
RTT107YHR154W HSP150P32478 413 aa1.44□□□□□ -2.18
RTT107YHR154W YKR070WP36151 352 aaKnown RBP1.44□□□□□ -2.18
RTT107YHR154W SVP26P38869 228 aa1.44□□□□□ -2.18
RTT107YHR154W SNF11P38956 169 aa1.44□□□□□ -2.18
RTT107YHR154W SPC25P40014 221 aa1.44□□□□□ -2.18
RTT107YHR154W NAT5Q08689 176 aa1.44□□□□□ -2.18
RTT107YHR154W YKL068W-AQ3E826 78 aa1.44□□□□□ -2.18
RTT107YHR154W YER039C-AP0CD97 72 aa1.44□□□□□ -2.18
RTT107YHR154W HSP26P15992 214 aaKnown RBP RIP-Chip data1.44□□□□□ -2.18 RIP-Chip
RTT107YHR154W HYP2P23301 157 aaKnown RBP1.44□□□□□ -2.18
RTT107YHR154W TOM40P23644 387 aaKnown RBP1.44□□□□□ -2.18
RTT107YHR154W RPL13BP40212 199 aaKnown RBP1.44□□□□□ -2.18
RTT107YHR154W YIL059CP40520 121 aa1.44□□□□□ -2.18
RTT107YHR154W YMR230W-AQ3E7B5 62 aa1.44□□□□□ -2.18
RTT107YHR154W MHF1Q3E835 90 aa1.44□□□□□ -2.18
RTT107YHR154W YEL045CP32616 141 aa1.44□□□□□ -2.18
RTT107YHR154W FZF1P32805 299 aa1.44□□□□□ -2.18
RTT107YHR154W FYV4P38783 130 aaPredicted RBP1.44□□□□□ -2.18
RTT107YHR154W NCE101Q02820 53 aa1.44□□□□□ -2.18
RTT107YHR154W RUB1Q03919 77 aa1.44□□□□□ -2.18
RTT107YHR154W SHH3Q04487 196 aa1.44□□□□□ -2.18
RTT107YHR154W CSI2Q08054 341 aa1.44□□□□□ -2.18
RTT107YHR154W ODC2Q99297 307 aa1.44□□□□□ -2.18
RTT107YHR154W YNR064CP53750 290 aa1.43□□□□□ -2.18
RTT107YHR154W COX12Q01519 83 aa1.43□□□□□ -2.18
RTT107YHR154W SED1Q01589 338 aa1.43□□□□□ -2.18
RTT107YHR154W RDS3Q06835 107 aaPredicted RBP1.43□□□□□ -2.18
RTT107YHR154W IRC23Q08416 157 aa1.43□□□□□ -2.18
RTT107YHR154W MDH2P22133 377 aa1.43□□□□□ -2.18
RTT107YHR154W MIG1P27705 504 aa1.43□□□□□ -2.18
RTT107YHR154W YPI1P43587 155 aa1.43□□□□□ -2.18
RTT107YHR154W PIR5P46999 287 aa1.43□□□□□ -2.18
RTT107YHR154W SIP18P50263 79 aa1.43□□□□□ -2.18
RTT107YHR154W YOR385WQ08909 290 aa1.43□□□□□ -2.18
RTT107YHR154W RPS23AP0CX29 145 aaKnown RBP1.42□□□□□ -2.18
RTT107YHR154W RPS23BP0CX30 145 aa1.42□□□□□ -2.18
RTT107YHR154W HSP12P22943 109 aaKnown RBP1.42□□□□□ -2.18
RTT107YHR154W HSP10P38910 106 aa1.42□□□□□ -2.18
RTT107YHR154W YPL067CQ02754 198 aa1.42□□□□□ -2.18
RTT107YHR154W FCF1Q05498 189 aaPredicted RBP1.42□□□□□ -2.18
RTT107YHR154W MRS4P23500 304 aa1.42□□□□□ -2.18
RTT107YHR154W SDH4P37298 181 aa1.42□□□□□ -2.18
RTT107YHR154W SPO73P40031 143 aa1.42□□□□□ -2.18
RTT107YHR154W YIR035CP40579 254 aa1.42□□□□□ -2.18
RTT107YHR154W PHS1P40857 217 aa1.42□□□□□ -2.18
RTT107YHR154W RPL22BP56628 122 aaKnown RBP1.42□□□□□ -2.18
RTT107YHR154W FEX1Q08913 375 aa1.42□□□□□ -2.18
RTT107YHR154W FEX2Q08991 375 aa1.42□□□□□ -2.18
RTT107YHR154W MRPS9P38120 278 aa1.42□□□□□ -2.18
RTT107YHR154W RRT1P38192 103 aa1.42□□□□□ -2.18
RTT107YHR154W RPL33BP41056 107 aaKnown RBP1.42□□□□□ -2.18
RTT107YHR154W YNR077CP53758 84 aa1.42□□□□□ -2.18
RTT107YHR154W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.42□□□□□ -2.18not detected
RTT107YHR154W SCP1Q08873 200 aa1.42□□□□□ -2.18
RTT107YHR154W SHB17P36136 271 aaKnown RBP1.41□□□□□ -2.18
RTT107YHR154W RPL14BP38754 138 aaKnown RBP1.41□□□□□ -2.18
RTT107YHR154W DIE2P50076 525 aa1.41□□□□□ -2.18
RTT107YHR154W UPS3Q04006 179 aa1.41□□□□□ -2.18
RTT107YHR154W YPR195CQ06594 109 aa1.41□□□□□ -2.18
RTT107YHR154W YOL085CQ99345 113 aa1.41□□□□□ -2.18
RTT107YHR154W SOD1P00445 154 aaKnown RBP1.41□□□□□ -2.18
RTT107YHR154W VAR1P02381 398 aa1.41□□□□□ -2.18
RTT107YHR154W TRS20P38334 175 aa1.41□□□□□ -2.18
RTT107YHR154W YEL067CP39978 195 aa1.41□□□□□ -2.18
RTT107YHR154W ANT1Q06497 328 aa1.41□□□□□ -2.18
RTT107YHR154W ATP20Q12233 115 aa1.41□□□□□ -2.18
RTT107YHR154W COA3Q3E7B2 85 aa1.41□□□□□ -2.18
RTT107YHR154W YOS1Q3E834 85 aa1.41□□□□□ -2.18
RTT107YHR154W RAS2P01120 322 aaKnown RBP1.4□□□□□ -2.18
RTT107YHR154W SRB6P32570 121 aa1.4□□□□□ -2.18
RTT107YHR154W YFR045WP43617 309 aa1.4□□□□□ -2.18
RTT107YHR154W YJL027CP47063 138 aaPredicted RBP1.4□□□□□ -2.18
RTT107YHR154W PAU23Q07987 124 aa1.4□□□□□ -2.18
RTT107YHR154W PAU17Q12370 124 aa1.4□□□□□ -2.18
RTT107YHR154W YJL197C-AP0C5P0 93 aa1.4□□□□□ -2.19
RTT107YHR154W UBC4P15731 148 aa1.4□□□□□ -2.19
RTT107YHR154W MID2P36027 376 aa1.4□□□□□ -2.19
RTT107YHR154W YER084WP40057 128 aa1.4□□□□□ -2.19
RTT107YHR154W GIS2P53849 153 aaKnown RBP RIP-Chip data1.4□□□□□ -2.19not detected
Retrieved 100 of 5,963 RNA–protein pairs in 43.5 ms