RNA–Protein interactions for RNA: YHR009C

TDA3, Transcript of Putative oxidoreductase involved in late endosome to Golgi transport, yeast

Gene TDA3, Length 1,572 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TDA3	YHR009C	RPL33B	P41056	107 aa	Known RBP	2.67	□□□□□ -1.98
TDA3	YHR009C	HSK3	P69852	69 aa		2.67	□□□□□ -1.98
TDA3	YHR009C	MRPS8	Q03799	155 aa		2.67	□□□□□ -1.98
TDA3	YHR009C	KEI1	Q06346	221 aa		2.67	□□□□□ -1.98
TDA3	YHR009C	EMC6	Q12431	108 aa		2.67	□□□□□ -1.98
TDA3	YHR009C	YNL277W-A	Q3E7Z0	62 aa		2.67	□□□□□ -1.98
TDA3	YHR009C	YML100W-A	Q8TGT0	57 aa		2.67	□□□□□ -1.98
TDA3	YHR009C	ODC2	Q99297	307 aa		2.67	□□□□□ -1.98
TDA3	YHR009C	TOM1	Q03280	3268 aa		2.67	□□□□□ -1.98
TDA3	YHR009C	YPR117W	Q06116	2489 aa		2.66	□□□□□ -1.98
TDA3	YHR009C	TY4B-H	P0C2J7	1802 aa		2.66	□□□□□ -1.98
TDA3	YHR009C	CPA1	P07258	411 aa	Known RBP	2.66	□□□□□ -1.98
TDA3	YHR009C	RPL40A	P0CH08	128 aa	Known RBP	2.66	□□□□□ -1.98
TDA3	YHR009C	RPL40B	P0CH09	128 aa	Known RBP	2.66	□□□□□ -1.98
TDA3	YHR009C	YPL073C	P40323	161 aa		2.66	□□□□□ -1.98
TDA3	YHR009C	YJL218W	P40892	196 aa	Known RBP	2.66	□□□□□ -1.98
TDA3	YHR009C	EAF6	P47128	113 aa		2.66	□□□□□ -1.98
TDA3	YHR009C	FIT3	Q08907	204 aa		2.66	□□□□□ -1.98
TDA3	YHR009C	YLR363W-A	Q3E747	85 aa		2.66	□□□□□ -1.98
TDA3	YHR009C	YGL010W	P25338	174 aa		2.66	□□□□□ -1.98
TDA3	YHR009C	YER134C	P40081	178 aa		2.66	□□□□□ -1.98
TDA3	YHR009C	CYB5	P40312	120 aa		2.66	□□□□□ -1.98
TDA3	YHR009C	CWP2	P43497	92 aa		2.66	□□□□□ -1.98
TDA3	YHR009C	PAU5	P43575	122 aa		2.66	□□□□□ -1.98
TDA3	YHR009C	BAT2	P47176	376 aa	Known RBP	2.66	□□□□□ -1.98
TDA3	YHR009C	RAF1	Q06891	181 aa		2.66	□□□□□ -1.98
TDA3	YHR009C	BUD3	P25558	1636 aa		2.65	□□□□□ -1.98
TDA3	YHR009C	POR1	P04840	283 aa	Known RBP	2.65	□□□□□ -1.99
TDA3	YHR009C	YCR099C	P25657	155 aa		2.65	□□□□□ -1.99
TDA3	YHR009C	PAU16	P35994	123 aa		2.65	□□□□□ -1.99
TDA3	YHR009C	PHO88	P38264	188 aa	Predicted RBP	2.65	□□□□□ -1.99
TDA3	YHR009C	YNL198C	P40166	100 aa		2.65	□□□□□ -1.99
TDA3	YHR009C	PEP8	P40335	379 aa		2.65	□□□□□ -1.99
TDA3	YHR009C	SFT1	P43682	97 aa		2.65	□□□□□ -1.99
TDA3	YHR009C	YNR077C	P53758	84 aa		2.65	□□□□□ -1.99
TDA3	YHR009C	LSM3	P57743	89 aa	Known RBP	2.65	□□□□□ -1.99
TDA3	YHR009C	VPS71	Q03433	280 aa		2.65	□□□□□ -1.99
TDA3	YHR009C	YMR103C	Q04436	120 aa		2.65	□□□□□ -1.99
TDA3	YHR009C	YDL157C	Q12082	118 aa		2.65	□□□□□ -1.99
TDA3	YHR009C	YOR097C	Q12274	175 aa	Predicted RBP	2.65	□□□□□ -1.99
TDA3	YHR009C	YIL102C-A	Q2V2P5	75 aa		2.65	□□□□□ -1.99
TDA3	YHR009C	TY4B-J	P47024	1803 aa		2.65	□□□□□ -1.99
TDA3	YHR009C	YAR023C	D6VPM8	179 aa		2.64	□□□□□ -1.99
TDA3	YHR009C	RPL2A	P0CX45	254 aa	Known RBP	2.64	□□□□□ -1.99
TDA3	YHR009C	RPL2B	P0CX46	254 aa	Known RBP	2.64	□□□□□ -1.99
TDA3	YHR009C	VTC1	P40046	129 aa	RIP-Chip data	2.64	□□□□□ -1.99	not detected
TDA3	YHR009C	YFL019C	P43576	117 aa		2.64	□□□□□ -1.99
TDA3	YHR009C	EMC4	P53073	190 aa		2.64	□□□□□ -1.99
TDA3	YHR009C	BOL2	P53082	120 aa		2.64	□□□□□ -1.99
TDA3	YHR009C	YGR164W	P53291	111 aa		2.64	□□□□□ -1.99
TDA3	YHR009C	YMR082C	Q04276	118 aa		2.64	□□□□□ -1.99
TDA3	YHR009C	YLR422W	Q06409	1932 aa		2.63	□□□□□ -1.99
TDA3	YHR009C	YCR085W	P25650	117 aa		2.63	□□□□□ -1.99
TDA3	YHR009C	HSP10	P38910	106 aa		2.63	□□□□□ -1.99
TDA3	YHR009C	YJL027C	P47063	138 aa	Predicted RBP	2.63	□□□□□ -1.99
TDA3	YHR009C	NMA1	Q06178	401 aa	Known RBP	2.63	□□□□□ -1.99
TDA3	YHR009C	MHF2	Q3E829	80 aa		2.63	□□□□□ -1.99
TDA3	YHR009C	ATG40	Q99325	256 aa		2.63	□□□□□ -1.99
TDA3	YHR009C	ENV10	Q99382	181 aa		2.63	□□□□□ -1.99
TDA3	YHR009C	VPS13	Q07878	3144 aa		2.63	□□□□□ -1.99
TDA3	YHR009C	TOR1	P35169	2470 aa		2.63	□□□□□ -1.99
TDA3	YHR009C	SPO13	P23624	291 aa		2.62	□□□□□ -1.99
TDA3	YHR009C	NHP2	P32495	156 aa	Predicted RBP	2.62	□□□□□ -1.99
TDA3	YHR009C	GPI2	P46961	280 aa		2.62	□□□□□ -1.99
TDA3	YHR009C	MPC3	P53311	146 aa		2.62	□□□□□ -1.99
TDA3	YHR009C	COX19	Q3E731	98 aa		2.62	□□□□□ -1.99
TDA3	YHR009C	YBT1	P32386	1661 aa		2.62	□□□□□ -1.99
TDA3	YHR009C	RPA12	P32529	125 aa	Known RBP	2.61	□□□□□ -1.99
TDA3	YHR009C	RPL14A	P36105	138 aa	Known RBP	2.61	□□□□□ -1.99
TDA3	YHR009C	FYV4	P38783	130 aa	Predicted RBP	2.61	□□□□□ -1.99
TDA3	YHR009C	CUP9	P41817	306 aa		2.61	□□□□□ -1.99
TDA3	YHR009C	YFR054C	P43622	192 aa		2.61	□□□□□ -1.99
TDA3	YHR009C	KNH1	P50112	268 aa		2.61	□□□□□ -1.99
TDA3	YHR009C	RPL30	P14120	105 aa	Known RBP	2.61	□□□□□ -1.99
TDA3	YHR009C	NRG2	P38082	220 aa		2.61	□□□□□ -1.99
TDA3	YHR009C	YAR029W	P39549	74 aa		2.61	□□□□□ -1.99
TDA3	YHR009C	YNL217W	P40152	326 aa		2.61	□□□□□ -1.99
TDA3	YHR009C	PHS1	P40857	217 aa		2.61	□□□□□ -1.99
TDA3	YHR009C	BUD25	P85052	153 aa		2.61	□□□□□ -1.99
TDA3	YHR009C	EST3	Q03096	181 aa		2.61	□□□□□ -1.99
TDA3	YHR009C	DAD1	Q12248	94 aa		2.61	□□□□□ -1.99
TDA3	YHR009C	YDL180W	Q12301	547 aa		2.61	□□□□□ -1.99
TDA3	YHR009C	YRF1-3	P0CX14	1859 aa		2.6	□□□□□ -1.99
TDA3	YHR009C	YRF1-7	P0CX15	1859 aa		2.6	□□□□□ -1.99
TDA3	YHR009C	YRF1-6	P53819	1859 aa		2.6	□□□□□ -1.99
TDA3	YHR009C	YOL162W	P0CF19	215 aa		2.6	□□□□□ -1.99
TDA3	YHR009C	TOM6	P33448	61 aa		2.6	□□□□□ -1.99
TDA3	YHR009C	HTD2	P38790	280 aa	Known RBP	2.6	□□□□□ -1.99
TDA3	YHR009C	SVP26	P38869	228 aa		2.6	□□□□□ -1.99
TDA3	YHR009C	ATG41	Q12048	136 aa		2.6	□□□□□ -1.99
TDA3	YHR009C	MSB2	P32334	1306 aa		2.59	□□□□□ -1.99
TDA3	YHR009C	YCR050C	P25630	102 aa		2.59	□□□□□ -1.99
TDA3	YHR009C	RPB7	P34087	171 aa		2.59	□□□□□ -1.99
TDA3	YHR009C	YHL018W	P38744	120 aa	Predicted RBP	2.59	□□□□□ -1.99
TDA3	YHR009C	YHR022C	P38763	256 aa		2.59	□□□□□ -1.99
TDA3	YHR009C	CCS1	P40202	249 aa	Known RBP	2.59	□□□□□ -1.99
TDA3	YHR009C	MIC27	P50945	234 aa		2.59	□□□□□ -1.99
TDA3	YHR009C	GPI19	Q04082	140 aa		2.59	□□□□□ -1.99
TDA3	YHR009C	RIM9	Q04734	239 aa		2.59	□□□□□ -1.99
TDA3	YHR009C	YFL041W-A	Q3E817	63 aa		2.59	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms