RNA–Protein interactions for RNA: YGL211W

NCS6, Transcript of Protein required for uridine thiolation of Gln, Lys, and Glu tRNAs, yeast

Gene NCS6, Length 1,080 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NCS6	YGL211W	YKR032W	P36127	104 aa		4.27	□□□□□ -1.73
NCS6	YGL211W	CCS1	P40202	249 aa	Known RBP	4.27	□□□□□ -1.73
NCS6	YGL211W	YFR035C	P43608	114 aa		4.27	□□□□□ -1.73
NCS6	YGL211W	CIS3	P47001	227 aa		4.27	□□□□□ -1.73
NCS6	YGL211W	ATP19	P81451	68 aa		4.27	□□□□□ -1.73
NCS6	YGL211W	FIT1	Q04433	528 aa		4.27	□□□□□ -1.73
NCS6	YGL211W	YBR298C-A	Q8TGK4	73 aa		4.27	□□□□□ -1.73
NCS6	YGL211W	CLB6	P32943	380 aa		4.26	□□□□□ -1.73
NCS6	YGL211W	YHR130C	P38834	111 aa		4.26	□□□□□ -1.73
NCS6	YGL211W	YHP1	Q04116	353 aa		4.26	□□□□□ -1.73
NCS6	YGL211W	YMR090W	Q04304	227 aa	Known RBP	4.26	□□□□□ -1.73
NCS6	YGL211W	PIN3	Q06449	215 aa		4.26	□□□□□ -1.73
NCS6	YGL211W	IRC23	Q08416	157 aa		4.26	□□□□□ -1.73
NCS6	YGL211W	SCS22	Q6Q595	175 aa		4.26	□□□□□ -1.73
NCS6	YGL211W	YOL162W	P0CF19	215 aa		4.25	□□□□□ -1.73
NCS6	YGL211W	STF2	P16965	84 aa		4.25	□□□□□ -1.73
NCS6	YGL211W	SMD3	P43321	101 aa	Known RBP	4.25	□□□□□ -1.73
NCS6	YGL211W	YFR045W	P43617	309 aa		4.25	□□□□□ -1.73
NCS6	YGL211W	YOR385W	Q08909	290 aa		4.25	□□□□□ -1.73
NCS6	YGL211W	YKL018C-A	Q3E7A7	99 aa		4.25	□□□□□ -1.73
NCS6	YGL211W	MID2	P36027	376 aa		4.24	□□□□□ -1.73
NCS6	YGL211W	YHL042W	P38729	150 aa		4.24	□□□□□ -1.73
NCS6	YGL211W	YIL059C	P40520	121 aa		4.24	□□□□□ -1.73
NCS6	YGL211W	THG1	P53215	237 aa	Known RBP	4.24	□□□□□ -1.73
NCS6	YGL211W	YPR174C	Q06616	221 aa	Predicted RBP	4.24	□□□□□ -1.73
NCS6	YGL211W	YOR381W-A	Q3E804	55 aa		4.24	□□□□□ -1.73
NCS6	YGL211W	COA4	Q05809	96 aa		4.23	□□□□□ -1.73
NCS6	YGL211W	ECM31	P38122	312 aa		4.22	□□□□□ -1.73
NCS6	YGL211W	KRE9	P39005	276 aa		4.22	□□□□□ -1.73
NCS6	YGL211W	ERG25	P53045	309 aa		4.22	□□□□□ -1.73
NCS6	YGL211W	RAF1	Q06891	181 aa		4.22	□□□□□ -1.73
NCS6	YGL211W	UTH1	P36135	365 aa		4.21	□□□□□ -1.74
NCS6	YGL211W	KNH1	P50112	268 aa		4.21	□□□□□ -1.74
NCS6	YGL211W	DOC1	P53068	250 aa		4.21	□□□□□ -1.74
NCS6	YGL211W	UPS3	Q04006	179 aa		4.21	□□□□□ -1.74
NCS6	YGL211W	YOR268C	Q08734	132 aa		4.21	□□□□□ -1.74
NCS6	YGL211W	YMR230W-A	Q3E7B5	62 aa		4.21	□□□□□ -1.74
NCS6	YGL211W	YPR096C	O13587	100 aa		4.2	□□□□□ -1.74
NCS6	YGL211W	UBC4	P15731	148 aa		4.2	□□□□□ -1.74
NCS6	YGL211W	YNR077C	P53758	84 aa		4.2	□□□□□ -1.74
NCS6	YGL211W	SOM1	Q05676	74 aa		4.2	□□□□□ -1.74
NCS6	YGL211W	YOL131W	Q08270	108 aa		4.2	□□□□□ -1.74
NCS6	YGL211W	RAD28	Q12021	506 aa		4.2	□□□□□ -1.74
NCS6	YGL211W	KSH1	Q8TGJ3	72 aa		4.2	□□□□□ -1.74
NCS6	YGL211W	QCR10	P37299	77 aa		4.19	□□□□□ -1.74
NCS6	YGL211W	YHR180W	P38868	163 aa		4.19	□□□□□ -1.74
NCS6	YGL211W	YGL260W	P53056	76 aa		4.19	□□□□□ -1.74
NCS6	YGL211W	GPI11	Q06636	219 aa		4.19	□□□□□ -1.74
NCS6	YGL211W	UBR1	P19812	1950 aa		4.19	□□□□□ -1.74
NCS6	YGL211W	EMP24	P32803	203 aa	Known RBP	4.18	□□□□□ -1.74
NCS6	YGL211W	YKL044W	P36092	106 aa		4.18	□□□□□ -1.74
NCS6	YGL211W	IPT1	P38954	527 aa		4.18	□□□□□ -1.74
NCS6	YGL211W	PIR5	P46999	287 aa		4.18	□□□□□ -1.74
NCS6	YGL211W	SNF11	P38956	169 aa		4.17	□□□□□ -1.74
NCS6	YGL211W	YEL067C	P39978	195 aa		4.17	□□□□□ -1.74
NCS6	YGL211W	RPL13B	P40212	199 aa	Known RBP	4.17	□□□□□ -1.74
NCS6	YGL211W	YDL241W	Q07738	123 aa		4.17	□□□□□ -1.74
NCS6	YGL211W	FIT3	Q08907	204 aa		4.17	□□□□□ -1.74
NCS6	YGL211W	YOR015W	Q12169	119 aa		4.17	□□□□□ -1.74
NCS6	YGL211W	MHF2	Q3E829	80 aa		4.17	□□□□□ -1.74
NCS6	YGL211W	YLR365W	Q7LIF2	110 aa		4.17	□□□□□ -1.74
NCS6	YGL211W	ATG40	Q99325	256 aa		4.17	□□□□□ -1.74
NCS6	YGL211W	INO4	P13902	151 aa		4.16	□□□□□ -1.74
NCS6	YGL211W	YGL010W	P25338	174 aa		4.16	□□□□□ -1.74
NCS6	YGL211W	TDA2	P40045	126 aa		4.16	□□□□□ -1.74
NCS6	YGL211W	RPL33B	P41056	107 aa	Known RBP	4.16	□□□□□ -1.74
NCS6	YGL211W	YML079W	Q03629	201 aa		4.16	□□□□□ -1.74
NCS6	YGL211W	IRC19	Q07843	230 aa		4.16	□□□□□ -1.74
NCS6	YGL211W	ATG41	Q12048	136 aa		4.16	□□□□□ -1.74
NCS6	YGL211W	YPR013C	Q12145	317 aa		4.16	□□□□□ -1.74
NCS6	YGL211W	YOS1	Q3E834	85 aa		4.16	□□□□□ -1.74
NCS6	YGL211W	MRPL44	P19956	98 aa		4.15	□□□□□ -1.75
NCS6	YGL211W	MIG1	P27705	504 aa		4.15	□□□□□ -1.75
NCS6	YGL211W	MRPL11	P36521	249 aa	Predicted RBP	4.15	□□□□□ -1.75
NCS6	YGL211W	SPO73	P40031	143 aa		4.15	□□□□□ -1.75
NCS6	YGL211W	YIL086C	P40503	102 aa		4.15	□□□□□ -1.75
NCS6	YGL211W	ERV14	P53173	138 aa		4.15	□□□□□ -1.75
NCS6	YGL211W	IGO1	P53897	168 aa		4.15	□□□□□ -1.75
NCS6	YGL211W	YCL001W-A	P87012	153 aa		4.15	□□□□□ -1.75
NCS6	YGL211W	GPI19	Q04082	140 aa		4.15	□□□□□ -1.75
NCS6	YGL211W	FAB1	P34756	2278 aa		4.15	□□□□□ -1.75
NCS6	YGL211W	RPS23A	P0CX29	145 aa	Known RBP	4.14	□□□□□ -1.75
NCS6	YGL211W	RPS23B	P0CX30	145 aa		4.14	□□□□□ -1.75
NCS6	YGL211W	FYV5	P25585	152 aa		4.14	□□□□□ -1.75
NCS6	YGL211W	GTT1	P40582	234 aa		4.14	□□□□□ -1.75
NCS6	YGL211W	YMR082C	Q04276	118 aa		4.14	□□□□□ -1.75
NCS6	YGL211W	TMC1	Q08422	150 aa	Predicted RBP	4.14	□□□□□ -1.75
NCS6	YGL211W	MHF1	Q3E835	90 aa		4.14	□□□□□ -1.75
NCS6	YGL211W	YHR213W-A	Q8TGT4	77 aa		4.14	□□□□□ -1.75
NCS6	YGL211W	MIC10	Q96VH5	97 aa		4.14	□□□□□ -1.75
NCS6	YGL211W	YLR236C	A0A023PZG4	107 aa		4.13	□□□□□ -1.75
NCS6	YGL211W	RPS27A	P35997	82 aa	Known RBP	4.13	□□□□□ -1.75
NCS6	YGL211W	RPS27B	P38711	82 aa		4.13	□□□□□ -1.75
NCS6	YGL211W	COA6	Q3E846	104 aa		4.13	□□□□□ -1.75
NCS6	YGL211W	YEL045C	P32616	141 aa		4.12	□□□□□ -1.75
NCS6	YGL211W	TIR3	P40552	269 aa		4.12	□□□□□ -1.75
NCS6	YGL211W	YJL027C	P47063	138 aa	Predicted RBP	4.12	□□□□□ -1.75
NCS6	YGL211W	YDR029W	Q12111	104 aa		4.12	□□□□□ -1.75
NCS6	YGL211W	TOR2	P32600	2474 aa	Known RBP	4.11	□□□□□ -1.75
NCS6	YGL211W	RPL40A	P0CH08	128 aa	Known RBP	4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms