RNA–Protein interactions for RNA: YER096W

SHC1, Transcript of Sporulation-specific activator of Chs3p (chitin synthase III), yeastyeast

Gene SHC1, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHC1YER096W BRP1P53194 125 aa5.89□□□□□ -1.47
SHC1YER096W UPS3Q04006 179 aa5.89□□□□□ -1.47
SHC1YER096W GPI19Q04082 140 aa5.89□□□□□ -1.47
SHC1YER096W YPL162CQ12042 273 aa5.89□□□□□ -1.47
SHC1YER096W MIG1P27705 504 aa5.89□□□□□ -1.47
SHC1YER096W GSP1P32835 219 aaKnown RBP5.89□□□□□ -1.47
SHC1YER096W GSP2P32836 220 aaKnown RBP5.89□□□□□ -1.47
SHC1YER096W YDR274CP87283 123 aa5.89□□□□□ -1.47
SHC1YER096W VPS71Q03433 280 aa5.89□□□□□ -1.47
SHC1YER096W GRH1Q04410 372 aaKnown RBP5.89□□□□□ -1.47
SHC1YER096W ERG27Q12452 347 aaKnown RBP5.89□□□□□ -1.47
SHC1YER096W YBR200W-AQ3E755 54 aa5.88□□□□□ -1.47
SHC1YER096W YIL134C-AQ45U18 67 aa5.88□□□□□ -1.47
SHC1YER096W RPL27AP0C2H6 136 aaKnown RBP5.87□□□□□ -1.47
SHC1YER096W YHR140WP38842 239 aa5.87□□□□□ -1.47
SHC1YER096W YJL028WP47062 111 aa5.87□□□□□ -1.47
SHC1YER096W YPR063CQ12160 140 aa5.87□□□□□ -1.47
SHC1YER096W POM33Q12164 279 aa5.87□□□□□ -1.47
SHC1YER096W CMC2Q3E7A4 109 aa5.87□□□□□ -1.47
SHC1YER096W CDC40P40968 455 aaPredicted RBP5.86□□□□□ -1.47
SHC1YER096W DIA1P54005 336 aa5.86□□□□□ -1.47
SHC1YER096W WIP1Q2V2P8 89 aa5.86□□□□□ -1.47
SHC1YER096W RPL16BP26785 198 aaKnown RBP5.85□□□□□ -1.47
SHC1YER096W COX16P47081 118 aa5.84□□□□□ -1.47
SHC1YER096W YIL014C-AQ02598 104 aa5.84□□□□□ -1.47
SHC1YER096W Q0255P03881 472 aa5.84□□□□□ -1.48
SHC1YER096W YIL002W-AQ3E7Z5 69 aa5.84□□□□□ -1.48
SHC1YER096W YPR053CQ6Q5F3 151 aa5.84□□□□□ -1.48
SHC1YER096W RPL11AP0C0W9 174 aaKnown RBP5.83□□□□□ -1.48
SHC1YER096W TEM1P38987 245 aa5.83□□□□□ -1.48
SHC1YER096W RRT13P40042 185 aa5.83□□□□□ -1.48
SHC1YER096W RPL11BQ3E757 174 aaPredicted RBP5.83□□□□□ -1.48
SHC1YER096W RPS11AP0CX47 156 aaKnown RBP5.82□□□□□ -1.48
SHC1YER096W RPS11BP0CX48 156 aaKnown RBP5.82□□□□□ -1.48
SHC1YER096W PRE1P22141 198 aaKnown RBP5.82□□□□□ -1.48
SHC1YER096W MRPL11P36521 249 aaPredicted RBP5.82□□□□□ -1.48
SHC1YER096W NRG2P38082 220 aa5.82□□□□□ -1.48
SHC1YER096W KEG1P43614 200 aa5.82□□□□□ -1.48
SHC1YER096W RPL2AP0CX45 254 aaKnown RBP5.81□□□□□ -1.48
SHC1YER096W RPL2BP0CX46 254 aaKnown RBP5.81□□□□□ -1.48
SHC1YER096W SEC72P39742 193 aaKnown RBP5.81□□□□□ -1.48
SHC1YER096W VHS2P40463 436 aa5.81□□□□□ -1.48
SHC1YER096W YGL118CP53132 145 aa5.81□□□□□ -1.48
SHC1YER096W MSC3Q05812 728 aa5.81□□□□□ -1.48
SHC1YER096W YER076CP40049 302 aa5.8□□□□□ -1.48
SHC1YER096W MGR2Q02889 113 aa5.8□□□□□ -1.48
SHC1YER096W YPR014CQ6B0W2 109 aa5.8□□□□□ -1.48
SHC1YER096W YDR366CP87287 132 aa5.79□□□□□ -1.48
SHC1YER096W YLR042CQ07990 161 aa5.79□□□□□ -1.48
SHC1YER096W SAL1D6W196 494 aa5.79□□□□□ -1.48
SHC1YER096W AQY1P0CD91 305 aa5.79□□□□□ -1.48
SHC1YER096W YCR023CP25351 611 aa5.79□□□□□ -1.48
SHC1YER096W KTI12P34253 313 aaKnown RBP5.79□□□□□ -1.48
SHC1YER096W COX12Q01519 83 aa5.79□□□□□ -1.48
SHC1YER096W AIM34Q03673 198 aa5.79□□□□□ -1.48
SHC1YER096W COA6Q3E846 104 aa5.79□□□□□ -1.48
SHC1YER096W POP3P53833 195 aaPredicted RBP5.78□□□□□ -1.48
SHC1YER096W TVP18Q04767 167 aa5.78□□□□□ -1.48
SHC1YER096W PAU16P35994 123 aa5.77□□□□□ -1.49
SHC1YER096W ATP23P53722 227 aa5.77□□□□□ -1.49
SHC1YER096W TPT1Q12272 230 aaKnown RBP5.77□□□□□ -1.49
SHC1YER096W PFY1P07274 126 aa5.76□□□□□ -1.49
SHC1YER096W YCR001WP25347 104 aa5.76□□□□□ -1.49
SHC1YER096W AUA1P32450 94 aa5.76□□□□□ -1.49
SHC1YER096W LSM8P47093 109 aaKnown RBP5.76□□□□□ -1.49
SHC1YER096W ERV14P53173 138 aa5.76□□□□□ -1.49
SHC1YER096W FCF1Q05498 189 aaPredicted RBP5.76□□□□□ -1.49
SHC1YER096W YLR281CQ05863 155 aa5.76□□□□□ -1.49
SHC1YER096W RPL42AP0CX27 106 aaKnown RBP5.75□□□□□ -1.49
SHC1YER096W RPL42BP0CX28 106 aaKnown RBP5.75□□□□□ -1.49
SHC1YER096W YPS5P53057 165 aa5.75□□□□□ -1.49
SHC1YER096W DPP1Q05521 289 aa5.75□□□□□ -1.49
SHC1YER096W YLR122CQ12312 125 aa5.75□□□□□ -1.49
SHC1YER096W CYC7P00045 113 aa5.74□□□□□ -1.49
SHC1YER096W SCM4P32564 187 aa5.74□□□□□ -1.49
SHC1YER096W FYV4P38783 130 aaPredicted RBP5.74□□□□□ -1.49
SHC1YER096W YNL217WP40152 326 aa5.74□□□□□ -1.49
SHC1YER096W YDR042CQ03205 200 aa5.74□□□□□ -1.49
SHC1YER096W PKR1Q03880 122 aaKnown RBP5.74□□□□□ -1.49
SHC1YER096W RDS3Q06835 107 aaPredicted RBP5.74□□□□□ -1.49
SHC1YER096W SCS22Q6Q595 175 aa5.74□□□□□ -1.49
SHC1YER096W PCL2P25693 308 aa5.74□□□□□ -1.49
SHC1YER096W ELF1P36053 145 aa5.74□□□□□ -1.49
SHC1YER096W KRE9P39005 276 aa5.74□□□□□ -1.49
SHC1YER096W DCV1P43595 202 aa5.74□□□□□ -1.49
SHC1YER096W GLO1P50107 326 aa5.74□□□□□ -1.49
SHC1YER096W YLR112WQ12130 139 aa5.74□□□□□ -1.49
SHC1YER096W FUN14P18411 198 aa5.73□□□□□ -1.49
SHC1YER096W CGR1P53188 120 aa5.73□□□□□ -1.49
SHC1YER096W SEC11P15367 167 aa5.72□□□□□ -1.49
SHC1YER096W YCH1P42937 148 aa5.72□□□□□ -1.49
SHC1YER096W TOS6P48560 102 aa5.72□□□□□ -1.49
SHC1YER096W DGA1Q08650 418 aa5.72□□□□□ -1.49
SHC1YER096W YPT53P36019 220 aa5.71□□□□□ -1.5
SHC1YER096W COA3Q3E7B2 85 aa5.71□□□□□ -1.5
SHC1YER096W HMRA2P0CY13 119 aa5.7□□□□□ -1.5
SHC1YER096W RPL16AP26784 199 aaKnown RBP5.7□□□□□ -1.5
SHC1YER096W YKR070WP36151 352 aaKnown RBP5.7□□□□□ -1.5
SHC1YER096W YJR146WP47174 117 aa5.7□□□□□ -1.5
SHC1YER096W CNL1Q06333 122 aa5.7□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms