RNA–Protein interactions for RNA: YER018C

SPC25, Transcript of Component of the kinetochore-associated Ndc80 complex, yeastyeast

Gene SPC25, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC25YER018C COX12Q01519 83 aa8.14□□□□□ -1.11
SPC25YER018C FRS1P15624 595 aaKnown RBP8.13□□□□□ -1.11
SPC25YER018C DXO1Q06349 442 aa8.13□□□□□ -1.11
SPC25YER018C YBR200W-AQ3E755 54 aa8.13□□□□□ -1.11
SPC25YER018C MLF3P32047 452 aa8.12□□□□□ -1.11
SPC25YER018C SSS1P35179 80 aa8.12□□□□□ -1.11
SPC25YER018C YPR053CQ6Q5F3 151 aa8.12□□□□□ -1.11
SPC25YER018C RPL16BP26785 198 aaKnown RBP8.11□□□□□ -1.11
SPC25YER018C SDH8P38345 138 aa8.11□□□□□ -1.11
SPC25YER018C YDR366CP87287 132 aa8.11□□□□□ -1.11
SPC25YER018C NRG2P38082 220 aa8.09□□□□□ -1.11
SPC25YER018C VHS2P40463 436 aa8.09□□□□□ -1.11
SPC25YER018C TVP18Q04767 167 aa8.09□□□□□ -1.11
SPC25YER018C MED7Q08278 222 aa8.09□□□□□ -1.11
SPC25YER018C ELF1P36053 145 aa8.08□□□□□ -1.12
SPC25YER018C YKR032WP36127 104 aa8.08□□□□□ -1.12
SPC25YER018C SEC72P39742 193 aaKnown RBP8.08□□□□□ -1.12
SPC25YER018C RRT13P40042 185 aa8.08□□□□□ -1.12
SPC25YER018C BRP1P53194 125 aa8.08□□□□□ -1.12
SPC25YER018C CMC2Q3E7A4 109 aa8.08□□□□□ -1.12
SPC25YER018C AIM34Q03673 198 aa8.07□□□□□ -1.12
SPC25YER018C YCR001WP25347 104 aa8.06□□□□□ -1.12
SPC25YER018C CUE4Q04201 117 aaPredicted RBP8.06□□□□□ -1.12
SPC25YER018C CYC7P00045 113 aa8.05□□□□□ -1.12
SPC25YER018C PET8P38921 284 aa8.05□□□□□ -1.12
SPC25YER018C YER134CP40081 178 aa8.05□□□□□ -1.12
SPC25YER018C YGL118CP53132 145 aa8.05□□□□□ -1.12
SPC25YER018C YCR075W-AQ3E830 75 aa8.05□□□□□ -1.12
SPC25YER018C KTI12P34253 313 aaKnown RBP8.04□□□□□ -1.12
SPC25YER018C YNL200CP40165 246 aaKnown RBP8.04□□□□□ -1.12
SPC25YER018C YCH1P42937 148 aa8.04□□□□□ -1.12
SPC25YER018C SEN15Q04675 128 aa8.04□□□□□ -1.12
SPC25YER018C YLR042CQ07990 161 aa8.04□□□□□ -1.12
SPC25YER018C YPR014CQ6B0W2 109 aa8.04□□□□□ -1.12
SPC25YER018C RPL42AP0CX27 106 aaKnown RBP8.03□□□□□ -1.12
SPC25YER018C RPL42BP0CX28 106 aaKnown RBP8.03□□□□□ -1.12
SPC25YER018C GSP1P32835 219 aaKnown RBP8.02□□□□□ -1.13
SPC25YER018C GSP2P32836 220 aaKnown RBP8.02□□□□□ -1.13
SPC25YER018C OST3P48439 350 aa8.02□□□□□ -1.13
SPC25YER018C YBR126W-AQ8TGU7 68 aa8.02□□□□□ -1.13
SPC25YER018C SAL1D6W196 494 aa8.01□□□□□ -1.13
SPC25YER018C TEM1P38987 245 aa8.01□□□□□ -1.13
SPC25YER018C YPS5P53057 165 aa8.01□□□□□ -1.13
SPC25YER018C ATP23P53722 227 aa8.01□□□□□ -1.13
SPC25YER018C RDS3Q06835 107 aaPredicted RBP8.01□□□□□ -1.13
SPC25YER018C MRPL11P36521 249 aaPredicted RBP8□□□□□ -1.13
SPC25YER018C YIL014C-AQ02598 104 aa8□□□□□ -1.13
SPC25YER018C YIL134C-AQ45U18 67 aa8□□□□□ -1.13
SPC25YER018C AUA1P32450 94 aa7.99□□□□□ -1.13
SPC25YER018C YRA2P36036 203 aaKnown RBP RIP-Chip data7.99□□□□□ -1.13not detected
SPC25YER018C YER076CP40049 302 aa7.99□□□□□ -1.13
SPC25YER018C YNL217WP40152 326 aa7.99□□□□□ -1.13
SPC25YER018C SGF11Q03067 99 aa7.99□□□□□ -1.13
SPC25YER018C SCW10Q04951 389 aa7.99□□□□□ -1.13
SPC25YER018C ERG27Q12452 347 aaKnown RBP7.99□□□□□ -1.13
SPC25YER018C YCR023CP25351 611 aa7.98□□□□□ -1.13
SPC25YER018C DCV1P43595 202 aa7.98□□□□□ -1.13
SPC25YER018C VAM10Q08474 114 aa7.98□□□□□ -1.13
SPC25YER018C PFY1P07274 126 aa7.97□□□□□ -1.13
SPC25YER018C GLO1P50107 326 aa7.97□□□□□ -1.13
SPC25YER018C DGA1Q08650 418 aa7.97□□□□□ -1.13
SPC25YER018C COA6Q3E846 104 aa7.97□□□□□ -1.13
SPC25YER018C HTL1Q9URQ5 78 aa7.97□□□□□ -1.13
SPC25YER018C PRE1P22141 198 aaKnown RBP7.96□□□□□ -1.14
SPC25YER018C CDC40P40968 455 aaPredicted RBP7.96□□□□□ -1.14
SPC25YER018C YPT53P36019 220 aa7.95□□□□□ -1.14
SPC25YER018C YKR070WP36151 352 aaKnown RBP7.95□□□□□ -1.14
SPC25YER018C YJL028WP47062 111 aa7.95□□□□□ -1.14
SPC25YER018C HAL1Q01766 294 aa7.95□□□□□ -1.14
SPC25YER018C MGR2Q02889 113 aa7.95□□□□□ -1.14
SPC25YER018C AQY1P0CD91 305 aa7.94□□□□□ -1.14
SPC25YER018C KRE9P39005 276 aa7.94□□□□□ -1.14
SPC25YER018C ERV14P53173 138 aa7.94□□□□□ -1.14
SPC25YER018C POP3P53833 195 aaPredicted RBP7.94□□□□□ -1.14
SPC25YER018C YGR240C-AQ3E786 66 aa7.94□□□□□ -1.14
SPC25YER018C PMP3P87284 55 aa7.93□□□□□ -1.14
SPC25YER018C PCL2P25693 308 aa7.92□□□□□ -1.14
SPC25YER018C FCF1Q05498 189 aaPredicted RBP7.92□□□□□ -1.14
SPC25YER018C DPP1Q05521 289 aa7.92□□□□□ -1.14
SPC25YER018C PAU16P35994 123 aa7.91□□□□□ -1.14
SPC25YER018C CGR1P53188 120 aa7.91□□□□□ -1.14
SPC25YER018C CRC1Q12289 327 aa7.9□□□□□ -1.14
SPC25YER018C YOR008C-AQ3E7B9 74 aa7.9□□□□□ -1.14
SPC25YER018C HMRA2P0CY13 119 aa7.89□□□□□ -1.15
SPC25YER018C YBR209WP38311 105 aa7.89□□□□□ -1.15
SPC25YER018C TOS6P48560 102 aa7.89□□□□□ -1.15
SPC25YER018C YDR042CQ03205 200 aa7.89□□□□□ -1.15
SPC25YER018C RPL27BP0C2H7 136 aaKnown RBP7.88□□□□□ -1.15
SPC25YER018C CNL1Q06333 122 aa7.88□□□□□ -1.15
SPC25YER018C RPS8AP0CX39 200 aaKnown RBP7.87□□□□□ -1.15
SPC25YER018C RPS8BP0CX40 200 aaKnown RBP7.87□□□□□ -1.15
SPC25YER018C UBC5P15732 148 aa7.87□□□□□ -1.15
SPC25YER018C LSM8P47093 109 aaKnown RBP7.87□□□□□ -1.15
SPC25YER018C YGL088WP53151 121 aa7.87□□□□□ -1.15
SPC25YER018C PKR1Q03880 122 aaKnown RBP7.87□□□□□ -1.15
SPC25YER018C RPL16AP26784 199 aaKnown RBP7.86□□□□□ -1.15
SPC25YER018C FYV4P38783 130 aaPredicted RBP7.86□□□□□ -1.15
SPC25YER018C YIL059CP40520 121 aa7.86□□□□□ -1.15
SPC25YER018C URM1P40554 99 aaPredicted RBP7.86□□□□□ -1.15
SPC25YER018C TPT1Q12272 230 aaKnown RBP7.86□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 34.3 ms