RNA–Protein interactions for RNA: YEL003W

GIM4, Transcript of Subunit of the heterohexameric cochaperone prefoldin complex, yeastyeast

Gene GIM4, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GIM4YEL003W RPS29AP41057 56 aaKnown RBP-2.61□□□□□ -2.83
GIM4YEL003W ECM5Q03214 1411 aa-2.61□□□□□ -2.83
GIM4YEL003W YLR255CO13574 117 aa-2.62□□□□□ -2.83
GIM4YEL003W COX23P38824 151 aa-2.62□□□□□ -2.83
GIM4YEL003W RPL35AP0CX84 120 aaKnown RBP-2.63□□□□□ -2.83
GIM4YEL003W RPL35BP0CX85 120 aaKnown RBP-2.63□□□□□ -2.83
GIM4YEL003W SPG1P50088 95 aa-2.64□□□□□ -2.83
GIM4YEL003W SHU1P38751 150 aa-2.65□□□□□ -2.83
GIM4YEL003W YDR381C-AQ3E6R5 114 aa-2.65□□□□□ -2.83
GIM4YEL003W TY1B-LR3P0C2I6 1755 aaKnown RBP-2.66□□□□□ -2.84
GIM4YEL003W TY1B-PR3P0C2J1 1755 aaKnown RBP-2.66□□□□□ -2.84
GIM4YEL003W RPS11AP0CX47 156 aaKnown RBP-2.67□□□□□ -2.84
GIM4YEL003W RPS11BP0CX48 156 aaKnown RBP-2.67□□□□□ -2.84
GIM4YEL003W FMP27Q06179 2628 aa-2.67□□□□□ -2.84
GIM4YEL003W RPC10P40422 70 aa-2.68□□□□□ -2.84
GIM4YEL003W PKR1Q03880 122 aaKnown RBP-2.68□□□□□ -2.84
GIM4YEL003W NSL1Q12143 216 aa-2.68□□□□□ -2.84
GIM4YEL003W SUI1P32911 108 aaKnown RBP-2.69□□□□□ -2.84
GIM4YEL003W YIL086CP40503 102 aa-2.69□□□□□ -2.84
GIM4YEL003W YAL064WP39711 94 aa-2.71□□□□□ -2.84
GIM4YEL003W YLR285C-AQ3E771 56 aa-2.71□□□□□ -2.84
GIM4YEL003W YJR107C-AP0CT86 78 aa-2.72□□□□□ -2.84
GIM4YEL003W TY1B-BLQ12490 1755 aa-2.73□□□□□ -2.85
GIM4YEL003W QCR2P07257 368 aa-2.73□□□□□ -2.85
GIM4YEL003W RPS28BP0C0X0 67 aaKnown RBP-2.73□□□□□ -2.85
GIM4YEL003W RPS28AQ3E7X9 67 aaPredicted RBP-2.73□□□□□ -2.85
GIM4YEL003W YPK9Q12697 1472 aa-2.73□□□□□ -2.85
GIM4YEL003W HKR1P41809 1802 aa-2.73□□□□□ -2.85
GIM4YEL003W CYB5P40312 120 aa-2.74□□□□□ -2.85
GIM4YEL003W TOR2P32600 2474 aaKnown RBP-2.75□□□□□ -2.85
GIM4YEL003W YRF1-2P40105 1681 aa-2.75□□□□□ -2.85
GIM4YEL003W YCR050CP25630 102 aa-2.75□□□□□ -2.85
GIM4YEL003W GIM3P53900 129 aa-2.75□□□□□ -2.85
GIM4YEL003W YKL044WP36092 106 aa-2.76□□□□□ -2.85
GIM4YEL003W MPC2P38857 129 aa-2.76□□□□□ -2.85
GIM4YEL003W YPL261CQ08976 102 aa-2.76□□□□□ -2.85
GIM4YEL003W YIL014C-AQ02598 104 aa-2.77□□□□□ -2.85
GIM4YEL003W YJL197C-AP0C5P0 93 aa-2.78□□□□□ -2.85
GIM4YEL003W YOR097CQ12274 175 aaPredicted RBP-2.78□□□□□ -2.85
GIM4YEL003W TOP2P06786 1428 aaKnown RBP-2.78□□□□□ -2.85
GIM4YEL003W MDN1Q12019 4910 aaKnown RBP-2.79□□□□□ -2.86
GIM4YEL003W RPC19P28000 142 aaKnown RBP-2.79□□□□□ -2.86
GIM4YEL003W COX19Q3E731 98 aa-2.8□□□□□ -2.86
GIM4YEL003W GCN1P33892 2672 aaKnown RBP-2.8□□□□□ -2.86
GIM4YEL003W MRPL38P35996 138 aaPredicted RBP-2.81□□□□□ -2.86
GIM4YEL003W GIM5Q04493 163 aa-2.81□□□□□ -2.86
GIM4YEL003W YHR050W-AQ05451 56 aa-2.81□□□□□ -2.86
GIM4YEL003W YCL048W-AQ2V2Q2 79 aa-2.81□□□□□ -2.86
GIM4YEL003W CAT8P39113 1433 aa-2.82□□□□□ -2.86
GIM4YEL003W TRM732Q03496 1420 aa-2.83□□□□□ -2.86
GIM4YEL003W PAM16P42949 149 aa-2.83□□□□□ -2.86
GIM4YEL003W DER1P38307 211 aa-2.84□□□□□ -2.86
GIM4YEL003W SEC59P20048 519 aa-2.85□□□□□ -2.87
GIM4YEL003W VPS51P36116 164 aa-2.85□□□□□ -2.87
GIM4YEL003W YGR025WP53216 100 aa-2.85□□□□□ -2.87
GIM4YEL003W RAD50P12753 1312 aa-2.86□□□□□ -2.87
GIM4YEL003W PET54P10834 293 aa-2.86□□□□□ -2.87
GIM4YEL003W YMR001C-AQ8TGS9 76 aa-2.86□□□□□ -2.87
GIM4YEL003W YDR366CP87287 132 aa-2.87□□□□□ -2.87
GIM4YEL003W YMR320WQ04897 101 aa-2.88□□□□□ -2.87
GIM4YEL003W YLR118CQ12354 227 aa-2.88□□□□□ -2.87
GIM4YEL003W SPC3Q12133 184 aa-2.89□□□□□ -2.87
GIM4YEL003W DYN1P36022 4092 aa-2.89□□□□□ -2.87
GIM4YEL003W AME1P38313 324 aa-2.9□□□□□ -2.87
GIM4YEL003W ERV14P53173 138 aa-2.9□□□□□ -2.87
GIM4YEL003W RPL38P49167 78 aaKnown RBP-2.91□□□□□ -2.88
GIM4YEL003W SLO1Q3E784 85 aa-2.91□□□□□ -2.88
GIM4YEL003W DNA2P38859 1522 aa-2.92□□□□□ -2.88
GIM4YEL003W ECM12O13529 151 aa-2.92□□□□□ -2.88
GIM4YEL003W HMRA2P0CY13 119 aa-2.92□□□□□ -2.88
GIM4YEL003W GRX3Q03835 250 aa-2.92□□□□□ -2.88
GIM4YEL003W YLR363W-AQ3E747 85 aa-2.92□□□□□ -2.88
GIM4YEL003W YCR101CP25607 182 aa-2.94□□□□□ -2.88
GIM4YEL003W RPL14AP36105 138 aaKnown RBP-2.94□□□□□ -2.88
GIM4YEL003W IMP2P46972 177 aa-2.94□□□□□ -2.88
GIM4YEL003W RPL14BP38754 138 aaKnown RBP-2.95□□□□□ -2.88
GIM4YEL003W AIM11P87275 137 aa-2.95□□□□□ -2.88
GIM4YEL003W ELC1Q03071 99 aa-2.95□□□□□ -2.88
GIM4YEL003W ARC19P33204 171 aaKnown RBP-2.96□□□□□ -2.88
GIM4YEL003W MIC10Q96VH5 97 aa-2.96□□□□□ -2.88
GIM4YEL003W PDX3P38075 228 aaKnown RBP-2.97□□□□□ -2.88
GIM4YEL003W YGR042WP53227 271 aa-2.97□□□□□ -2.88
GIM4YEL003W PAU12P53343 120 aa-2.97□□□□□ -2.88
GIM4YEL003W YBL044WP38194 122 aa-2.98□□□□□ -2.89
GIM4YEL003W TRS20P38334 175 aa-2.98□□□□□ -2.89
GIM4YEL003W TVP18Q04767 167 aa-2.98□□□□□ -2.89
GIM4YEL003W CNL1Q06333 122 aa-2.98□□□□□ -2.89
GIM4YEL003W RSM18P40033 138 aa-2.99□□□□□ -2.89
GIM4YEL003W RGI1P40043 161 aaPredicted RBP-2.99□□□□□ -2.89
GIM4YEL003W YGR039WP53225 103 aa-2.99□□□□□ -2.89
GIM4YEL003W MPC1P53157 130 aaKnown RBP-3□□□□□ -2.89
GIM4YEL003W YPL038W-AQ3E7B4 63 aa-3□□□□□ -2.89
GIM4YEL003W YRF1-1P0CX20 1796 aa-3.01□□□□□ -2.89
GIM4YEL003W YRF1-5P0CX21 1796 aa-3.01□□□□□ -2.89
GIM4YEL003W YRF1-8P0CX22 1796 aa-3.01□□□□□ -2.89
GIM4YEL003W GPI19Q04082 140 aa-3.01□□□□□ -2.89
GIM4YEL003W TY1B-DR5P0C2I2 1755 aa-3.02□□□□□ -2.89
GIM4YEL003W TY1B-DR6P0C2I3 1755 aa-3.02□□□□□ -2.89
GIM4YEL003W TY1B-LR2P0C2I5 1755 aa-3.02□□□□□ -2.89
GIM4YEL003W TY1B-PR1P0C2I9 1755 aaKnown RBP-3.02□□□□□ -2.89
Retrieved 100 of 5,963 RNA–protein pairs in 38.5 ms