RNA–Protein interactions for RNA: YDR498C

SEC20, Transcript of Membrane glycoprotein v-SNARE, yeastyeast

Gene SEC20, Length 1,152 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC20YDR498C YNL146C-AQ3E7Z1 64 aa4.36□□□□□ -1.71
SEC20YDR498C CCW14O13547 238 aa4.35□□□□□ -1.71
SEC20YDR498C VAR1P02381 398 aa4.35□□□□□ -1.71
SEC20YDR498C SEC11P15367 167 aa4.35□□□□□ -1.71
SEC20YDR498C VMA16P23968 213 aa4.35□□□□□ -1.71
SEC20YDR498C AGA1P32323 725 aa4.35□□□□□ -1.71
SEC20YDR498C YER135CP40082 130 aa4.35□□□□□ -1.71
SEC20YDR498C YER188WP40103 239 aa4.35□□□□□ -1.71
SEC20YDR498C YGL118CP53132 145 aa4.35□□□□□ -1.71
SEC20YDR498C YMR244WQ04018 355 aa4.35□□□□□ -1.71
SEC20YDR498C IZH3Q07959 543 aa4.35□□□□□ -1.71
SEC20YDR498C MSA1Q08471 629 aa4.35□□□□□ -1.71
SEC20YDR498C NAT5Q08689 176 aa4.35□□□□□ -1.71
SEC20YDR498C SCS22Q6Q595 175 aa4.35□□□□□ -1.71
SEC20YDR498C RPL27AP0C2H6 136 aaKnown RBP4.34□□□□□ -1.71
SEC20YDR498C YHR140WP38842 239 aa4.34□□□□□ -1.71
SEC20YDR498C MIG3P39943 394 aa4.34□□□□□ -1.71
SEC20YDR498C MRPL49P40858 161 aaPredicted RBP4.34□□□□□ -1.71
SEC20YDR498C MIC26P50087 233 aa4.34□□□□□ -1.71
SEC20YDR498C POP3P53833 195 aaPredicted RBP4.34□□□□□ -1.71
SEC20YDR498C MGR2Q02889 113 aa4.34□□□□□ -1.71
SEC20YDR498C POM33Q12164 279 aa4.34□□□□□ -1.71
SEC20YDR498C WIP1Q2V2P8 89 aa4.34□□□□□ -1.71
SEC20YDR498C YBR200W-AQ3E755 54 aa4.34□□□□□ -1.71
SEC20YDR498C LSO2Q3E772 92 aaKnown RBP4.34□□□□□ -1.71
SEC20YDR498C YCL042WP25572 119 aa4.33□□□□□ -1.72
SEC20YDR498C UPS3Q04006 179 aa4.33□□□□□ -1.72
SEC20YDR498C DPP1Q05521 289 aa4.33□□□□□ -1.72
SEC20YDR498C AQY1P0CD91 305 aa4.32□□□□□ -1.72
SEC20YDR498C YHR212W-AP0CX91 67 aa4.32□□□□□ -1.72
SEC20YDR498C YCR023CP25351 611 aa4.32□□□□□ -1.72
SEC20YDR498C SEC72P39742 193 aaKnown RBP4.32□□□□□ -1.72
SEC20YDR498C YER076CP40049 302 aa4.32□□□□□ -1.72
SEC20YDR498C AGE2P40529 298 aa4.32□□□□□ -1.72
SEC20YDR498C YGL230CP53074 147 aa4.32□□□□□ -1.72
SEC20YDR498C YDR042CQ03205 200 aa4.32□□□□□ -1.72
SEC20YDR498C MRPS8Q03799 155 aa4.32□□□□□ -1.72
SEC20YDR498C MSC3Q05812 728 aa4.32□□□□□ -1.72
SEC20YDR498C MHR1Q06630 226 aa4.32□□□□□ -1.72
SEC20YDR498C YLR112WQ12130 139 aa4.32□□□□□ -1.72
SEC20YDR498C FYV7Q12247 151 aa4.32□□□□□ -1.72
SEC20YDR498C DFM1Q12743 341 aaKnown RBP4.32□□□□□ -1.72
SEC20YDR498C YPR014CQ6B0W2 109 aa4.32□□□□□ -1.72
SEC20YDR498C YFL068WP0CX99 160 aa4.31□□□□□ -1.72
SEC20YDR498C YLL066W-AP0CY00 160 aa4.31□□□□□ -1.72
SEC20YDR498C YLL067W-AP0CY01 160 aa4.31□□□□□ -1.72
SEC20YDR498C FYV4P38783 130 aaPredicted RBP4.31□□□□□ -1.72
SEC20YDR498C HAC1P41546 238 aa4.31□□□□□ -1.72
SEC20YDR498C FCF1Q05498 189 aaPredicted RBP4.31□□□□□ -1.72
SEC20YDR498C PRM3Q08931 133 aa4.31□□□□□ -1.72
SEC20YDR498C YPL162CQ12042 273 aa4.31□□□□□ -1.72
SEC20YDR498C SAL1D6W196 494 aa4.3□□□□□ -1.72
SEC20YDR498C PFY1P07274 126 aa4.3□□□□□ -1.72
SEC20YDR498C ATP5P09457 212 aa4.3□□□□□ -1.72
SEC20YDR498C YDL022C-AP0C5L6 82 aa4.3□□□□□ -1.72
SEC20YDR498C RPL16BP26785 198 aaKnown RBP4.3□□□□□ -1.72
SEC20YDR498C DIA1P54005 336 aa4.3□□□□□ -1.72
SEC20YDR498C VPS71Q03433 280 aa4.3□□□□□ -1.72
SEC20YDR498C RRT13P40042 185 aa4.29□□□□□ -1.72
SEC20YDR498C COX16P47081 118 aa4.29□□□□□ -1.72
SEC20YDR498C CNL1Q06333 122 aa4.29□□□□□ -1.72
SEC20YDR498C TMA7Q3E764 64 aaKnown RBP4.29□□□□□ -1.72
SEC20YDR498C RPP2AP05319 106 aaKnown RBP4.28□□□□□ -1.72
SEC20YDR498C UTR5P32630 166 aa4.28□□□□□ -1.72
SEC20YDR498C KTI12P34253 313 aaKnown RBP4.28□□□□□ -1.72
SEC20YDR498C YEL067CP39978 195 aa4.28□□□□□ -1.72
SEC20YDR498C GRH1Q04410 372 aaKnown RBP4.28□□□□□ -1.72
SEC20YDR498C DGA1Q08650 418 aa4.28□□□□□ -1.72
SEC20YDR498C COA3Q3E7B2 85 aa4.28□□□□□ -1.72
SEC20YDR498C YDL085C-AQ3E7B7 68 aaKnown RBP4.28□□□□□ -1.72
SEC20YDR498C PCL2P25693 308 aa4.27□□□□□ -1.73
SEC20YDR498C MSL1P40567 111 aaPredicted RBP4.27□□□□□ -1.73
SEC20YDR498C ATP23P53722 227 aa4.27□□□□□ -1.73
SEC20YDR498C SAE3P89114 91 aa4.27□□□□□ -1.73
SEC20YDR498C BET5Q03630 159 aa4.27□□□□□ -1.73
SEC20YDR498C Q0255P03881 472 aa4.26□□□□□ -1.73
SEC20YDR498C RPL27BP0C2H7 136 aaKnown RBP4.26□□□□□ -1.73
SEC20YDR498C PRY2P36110 329 aa4.26□□□□□ -1.73
SEC20YDR498C ECM33P38248 429 aaKnown RBP4.26□□□□□ -1.73
SEC20YDR498C MPC2P38857 129 aa4.26□□□□□ -1.73
SEC20YDR498C VHS2P40463 436 aa4.26□□□□□ -1.73
SEC20YDR498C TOS6P48560 102 aa4.26□□□□□ -1.73
SEC20YDR498C YMR103CQ04436 120 aa4.26□□□□□ -1.73
SEC20YDR498C RRG8Q06109 277 aa4.26□□□□□ -1.73
SEC20YDR498C PAU23Q07987 124 aa4.26□□□□□ -1.73
SEC20YDR498C YLR042CQ07990 161 aa4.26□□□□□ -1.73
SEC20YDR498C YOR097CQ12274 175 aaPredicted RBP4.26□□□□□ -1.73
SEC20YDR498C PAU17Q12370 124 aa4.26□□□□□ -1.73
SEC20YDR498C HMRA2P0CY13 119 aa4.25□□□□□ -1.73
SEC20YDR498C YDL186WP48568 277 aa4.25□□□□□ -1.73
SEC20YDR498C GLO1P50107 326 aa4.25□□□□□ -1.73
SEC20YDR498C TVP18Q04767 167 aa4.25□□□□□ -1.73
SEC20YDR498C YLR050CQ12155 161 aaKnown RBP4.25□□□□□ -1.73
SEC20YDR498C RPL42AP0CX27 106 aaKnown RBP4.24□□□□□ -1.73
SEC20YDR498C RPL42BP0CX28 106 aaKnown RBP4.24□□□□□ -1.73
SEC20YDR498C DCV1P43595 202 aa4.24□□□□□ -1.73
SEC20YDR498C YJR146WP47174 117 aa4.24□□□□□ -1.73
SEC20YDR498C ALG13P53178 202 aa4.24□□□□□ -1.73
SEC20YDR498C YDR366CP87287 132 aa4.24□□□□□ -1.73
SEC20YDR498C AIM34Q03673 198 aa4.24□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms