RNA–Protein interactions for RNA: YDR425W

SNX41, Transcript of Sorting nexin, yeastyeast

Gene SNX41, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX41YDR425W FCY1Q12178 158 aa1.91□□□□□ -2.1
SNX41YDR425W USB1Q12208 290 aaKnown RBP1.91□□□□□ -2.1
SNX41YDR425W YPS3Q12303 508 aa1.91□□□□□ -2.1
SNX41YDR425W BOL1Q3E793 110 aa1.91□□□□□ -2.1
SNX41YDR425W NAG1Q8TGN9 163 aa1.91□□□□□ -2.1
SNX41YDR425W RPL27BP0C2H7 136 aaKnown RBP1.9□□□□□ -2.1
SNX41YDR425W KRE1P17260 313 aa1.9□□□□□ -2.1
SNX41YDR425W MRPL20P22354 195 aaPredicted RBP1.9□□□□□ -2.1
SNX41YDR425W HSP12P22943 109 aaKnown RBP1.9□□□□□ -2.1
SNX41YDR425W ROX3P25046 220 aa1.9□□□□□ -2.1
SNX41YDR425W RPA12P32529 125 aaKnown RBP1.9□□□□□ -2.1
SNX41YDR425W RPS27AP35997 82 aaKnown RBP1.9□□□□□ -2.1
SNX41YDR425W YKR041WP36134 250 aa1.9□□□□□ -2.1
SNX41YDR425W CSH1P38287 376 aa1.9□□□□□ -2.1
SNX41YDR425W MIC12P38341 106 aa1.9□□□□□ -2.1
SNX41YDR425W RPS27BP38711 82 aa1.9□□□□□ -2.1
SNX41YDR425W OXA1P39952 402 aa1.9□□□□□ -2.1
SNX41YDR425W YER121WP40076 114 aa1.9□□□□□ -2.1
SNX41YDR425W CWP2P43497 92 aa1.9□□□□□ -2.1
SNX41YDR425W YGR039WP53225 103 aa1.9□□□□□ -2.1
SNX41YDR425W YDR042CQ03205 200 aa1.9□□□□□ -2.1
SNX41YDR425W FIT2Q08906 153 aa1.9□□□□□ -2.1
SNX41YDR425W RPS16AP0CX51 143 aaKnown RBP1.9□□□□□ -2.11
SNX41YDR425W RPS16BP0CX52 143 aaKnown RBP1.9□□□□□ -2.11
SNX41YDR425W TOM40P23644 387 aaKnown RBP1.9□□□□□ -2.11
SNX41YDR425W MED6P38782 295 aa1.9□□□□□ -2.11
SNX41YDR425W PAU7P39545 55 aa1.9□□□□□ -2.11
SNX41YDR425W YEL067CP39978 195 aa1.9□□□□□ -2.11
SNX41YDR425W OSW5P40219 148 aa1.9□□□□□ -2.11
SNX41YDR425W VHS2P40463 436 aa1.9□□□□□ -2.11
SNX41YDR425W UBC13P52490 153 aa1.9□□□□□ -2.11
SNX41YDR425W SDH7Q04401 133 aa1.9□□□□□ -2.11
SNX41YDR425W YMR103CQ04436 120 aa1.9□□□□□ -2.11
SNX41YDR425W YGL258W-AQ3E740 77 aa1.9□□□□□ -2.11
SNX41YDR425W YAL063C-AQ3E791 96 aa1.9□□□□□ -2.11
SNX41YDR425W VPS63O13549 108 aa1.89□□□□□ -2.11
SNX41YDR425W PIS1P06197 220 aaKnown RBP1.89□□□□□ -2.11
SNX41YDR425W TIR2P33890 251 aa1.89□□□□□ -2.11
SNX41YDR425W YKR032WP36127 104 aa1.89□□□□□ -2.11
SNX41YDR425W MRPL24P36525 258 aaPredicted RBP1.89□□□□□ -2.11
SNX41YDR425W YER076CP40049 302 aa1.89□□□□□ -2.11
SNX41YDR425W LCB3P47013 409 aa1.89□□□□□ -2.11
SNX41YDR425W YIP3P53633 176 aa1.89□□□□□ -2.11
SNX41YDR425W NIP7Q08962 181 aaKnown RBP1.89□□□□□ -2.11
SNX41YDR425W RFM1Q12192 310 aa1.89□□□□□ -2.11
SNX41YDR425W YDL022C-AP0C5L6 82 aa1.88□□□□□ -2.11
SNX41YDR425W YER039C-AP0CD97 72 aa1.88□□□□□ -2.11
SNX41YDR425W YMR31P19955 123 aa1.88□□□□□ -2.11
SNX41YDR425W FPR1P20081 114 aaKnown RBP1.88□□□□□ -2.11
SNX41YDR425W MRPS5P33759 307 aa1.88□□□□□ -2.11
SNX41YDR425W YMR141CP40211 102 aa1.88□□□□□ -2.11
SNX41YDR425W TIF34P40217 347 aaKnown RBP1.88□□□□□ -2.11
SNX41YDR425W YNR077CP53758 84 aa1.88□□□□□ -2.11
SNX41YDR425W DAD4P69851 72 aa1.88□□□□□ -2.11
SNX41YDR425W HSK3P69852 69 aa1.88□□□□□ -2.11
SNX41YDR425W UBC7Q02159 165 aa1.88□□□□□ -2.11
SNX41YDR425W YPL261CQ08976 102 aa1.88□□□□□ -2.11
SNX41YDR425W YOR097CQ12274 175 aaPredicted RBP1.88□□□□□ -2.11
SNX41YDR425W VMA11P32842 164 aa1.88□□□□□ -2.11
SNX41YDR425W NRG2P38082 220 aa1.88□□□□□ -2.11
SNX41YDR425W DSE2P38844 325 aa1.88□□□□□ -2.11
SNX41YDR425W YIL059CP40520 121 aa1.88□□□□□ -2.11
SNX41YDR425W ECO1P43605 281 aa1.88□□□□□ -2.11
SNX41YDR425W PGU1P47180 361 aa1.88□□□□□ -2.11
SNX41YDR425W SBH2P52871 88 aa1.88□□□□□ -2.11
SNX41YDR425W UPS1Q05776 175 aa1.88□□□□□ -2.11
SNX41YDR425W LSM6Q06406 86 aaKnown RBP1.88□□□□□ -2.11
SNX41YDR425W YFL041W-AQ3E817 63 aa1.88□□□□□ -2.11
SNX41YDR425W ENV10Q99382 181 aa1.88□□□□□ -2.11
SNX41YDR425W FPR2P32472 135 aa1.87□□□□□ -2.11
SNX41YDR425W YKL097CP34245 136 aa1.87□□□□□ -2.11
SNX41YDR425W GPI18P38211 433 aa1.87□□□□□ -2.11
SNX41YDR425W VTC1P40046 129 aaRIP-Chip data1.87□□□□□ -2.11not detected
SNX41YDR425W VPS55P47111 140 aa1.87□□□□□ -2.11
SNX41YDR425W KNH1P50112 268 aa1.87□□□□□ -2.11
SNX41YDR425W MIX14Q04341 121 aa1.87□□□□□ -2.11
SNX41YDR425W FCF1Q05498 189 aaPredicted RBP1.87□□□□□ -2.11
SNX41YDR425W RRG8Q06109 277 aa1.87□□□□□ -2.11
SNX41YDR425W YOR376WQ08900 122 aa1.87□□□□□ -2.11
SNX41YDR425W DAD1Q12248 94 aa1.87□□□□□ -2.11
SNX41YDR425W YDR119W-AQ2V2P9 66 aa1.87□□□□□ -2.11
SNX41YDR425W YCR085WP25650 117 aa1.86□□□□□ -2.11
SNX41YDR425W YKL070WP36087 169 aa1.86□□□□□ -2.11
SNX41YDR425W MRPL49P40858 161 aaPredicted RBP1.86□□□□□ -2.11
SNX41YDR425W FIP1P45976 327 aa1.86□□□□□ -2.11
SNX41YDR425W CIS3P47001 227 aa1.86□□□□□ -2.11
SNX41YDR425W YGR018CP53211 109 aa1.86□□□□□ -2.11
SNX41YDR425W HST4P53688 370 aa1.86□□□□□ -2.11
SNX41YDR425W TIM22Q12328 207 aa1.86□□□□□ -2.11
SNX41YDR425W ECM12O13529 151 aa1.86□□□□□ -2.11
SNX41YDR425W Q0255P03881 472 aa1.86□□□□□ -2.11
SNX41YDR425W RAD6P06104 172 aa1.86□□□□□ -2.11
SNX41YDR425W RPL27AP0C2H6 136 aaKnown RBP1.86□□□□□ -2.11
SNX41YDR425W YHR214C-DP0CX93 97 aa1.86□□□□□ -2.11
SNX41YDR425W HMRA2P0CY13 119 aa1.86□□□□□ -2.11
SNX41YDR425W YHR140WP38842 239 aa1.86□□□□□ -2.11
SNX41YDR425W YER085CP40058 173 aa1.86□□□□□ -2.11
SNX41YDR425W YIA6P40556 373 aa1.86□□□□□ -2.11
SNX41YDR425W YFL051CP43552 160 aa1.86□□□□□ -2.11
SNX41YDR425W SKI6P46948 246 aaPredicted RBP1.86□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 109.6 ms