RNA–Protein interactions for RNA: YDR395W

SXM1, Transcript of Nuclear transport factor (karyopherin), yeastyeast

Gene SXM1, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SXM1YDR395W YPR170W-BP0C5R9 85 aa1.17□□□□□ -2.22
SXM1YDR395W RPL42AP0CX27 106 aaKnown RBP1.17□□□□□ -2.22
SXM1YDR395W RPL42BP0CX28 106 aaKnown RBP1.17□□□□□ -2.22
SXM1YDR395W PAM17P36147 197 aa1.17□□□□□ -2.22
SXM1YDR395W RRT1P38192 103 aa1.17□□□□□ -2.22
SXM1YDR395W GPI18P38211 433 aa1.17□□□□□ -2.22
SXM1YDR395W UMP1P38293 148 aa1.17□□□□□ -2.22
SXM1YDR395W YIL012WP40551 113 aa1.17□□□□□ -2.22
SXM1YDR395W ERV14P53173 138 aa1.17□□□□□ -2.22
SXM1YDR395W CRH1P53301 507 aa1.17□□□□□ -2.22
SXM1YDR395W YNR064CP53750 290 aa1.17□□□□□ -2.22
SXM1YDR395W YMR244WQ04018 355 aa1.17□□□□□ -2.22
SXM1YDR395W FEX1Q08913 375 aa1.17□□□□□ -2.22
SXM1YDR395W YOR015WQ12169 119 aa1.17□□□□□ -2.22
SXM1YDR395W YER078W-AQ3E7A2 54 aa1.17□□□□□ -2.22
SXM1YDR395W YBR298C-AQ8TGK4 73 aa1.17□□□□□ -2.22
SXM1YDR395W BPH1P25356 2167 aa1.17□□□□□ -2.22
SXM1YDR395W ECM12O13529 151 aa1.17□□□□□ -2.22
SXM1YDR395W MIG1P27705 504 aa1.17□□□□□ -2.22
SXM1YDR395W IPT1P38954 527 aa1.17□□□□□ -2.22
SXM1YDR395W ASP1P38986 381 aaPredicted RBP1.17□□□□□ -2.22
SXM1YDR395W DSK2P48510 373 aa1.17□□□□□ -2.22
SXM1YDR395W KNH1P50112 268 aa1.17□□□□□ -2.22
SXM1YDR395W YGL193CP53097 103 aa1.17□□□□□ -2.22
SXM1YDR395W THG1P53215 237 aaKnown RBP1.17□□□□□ -2.22
SXM1YDR395W UPS3Q04006 179 aa1.17□□□□□ -2.22
SXM1YDR395W YDR415CQ04033 374 aaPredicted RBP1.17□□□□□ -2.22
SXM1YDR395W API2Q04413 109 aa1.17□□□□□ -2.22
SXM1YDR395W YGR035W-AQ45U48 73 aa1.17□□□□□ -2.22
SXM1YDR395W MIC10Q96VH5 97 aa1.17□□□□□ -2.22
SXM1YDR395W TIM9O74700 87 aa1.16□□□□□ -2.22
SXM1YDR395W ADH3P07246 375 aaKnown RBP1.16□□□□□ -2.22
SXM1YDR395W YJL197C-AP0C5P0 93 aa1.16□□□□□ -2.22
SXM1YDR395W FUN14P18411 198 aa1.16□□□□□ -2.22
SXM1YDR395W CDC43P18898 376 aa1.16□□□□□ -2.22
SXM1YDR395W FLX1P40464 311 aa1.16□□□□□ -2.22
SXM1YDR395W YFL065CP43539 102 aa1.16□□□□□ -2.22
SXM1YDR395W CAX4P53223 239 aa1.16□□□□□ -2.22
SXM1YDR395W RSM19P53733 91 aaPredicted RBP1.16□□□□□ -2.22
SXM1YDR395W SRL1Q08673 210 aa1.16□□□□□ -2.22
SXM1YDR395W YOR385WQ08909 290 aa1.16□□□□□ -2.22
SXM1YDR395W FEX2Q08991 375 aa1.16□□□□□ -2.22
SXM1YDR395W YPR203WQ08994 102 aa1.16□□□□□ -2.22
SXM1YDR395W COA6Q3E846 104 aa1.16□□□□□ -2.22
SXM1YDR395W YLR365WQ7LIF2 110 aa1.16□□□□□ -2.22
SXM1YDR395W KSH1Q8TGJ3 72 aa1.16□□□□□ -2.22
SXM1YDR395W FLO9P39712 1322 aa1.16□□□□□ -2.22
SXM1YDR395W POR1P04840 283 aaKnown RBP1.16□□□□□ -2.22
SXM1YDR395W HAP3P13434 144 aa1.16□□□□□ -2.22
SXM1YDR395W YCR099CP25657 155 aa1.16□□□□□ -2.22
SXM1YDR395W SDH3P33421 198 aa1.16□□□□□ -2.22
SXM1YDR395W SSS1P35179 80 aa1.16□□□□□ -2.22
SXM1YDR395W YNL217WP40152 326 aa1.16□□□□□ -2.22
SXM1YDR395W ARC15P40518 154 aaRIP-Chip data1.16□□□□□ -2.22not detected
SXM1YDR395W DAN1P47178 298 aa1.16□□□□□ -2.22
SXM1YDR395W YDR274CP87283 123 aa1.16□□□□□ -2.22
SXM1YDR395W MRPS8Q03799 155 aa1.16□□□□□ -2.22
SXM1YDR395W YPL264CQ08980 353 aa1.16□□□□□ -2.22
SXM1YDR395W CRC1Q12289 327 aa1.16□□□□□ -2.22
SXM1YDR395W RRT15Q3E811 62 aa1.16□□□□□ -2.22
SXM1YDR395W ASK1P35734 292 aa1.16□□□□□ -2.22
SXM1YDR395W OM14P38325 134 aa1.16□□□□□ -2.22
SXM1YDR395W YNL208WP40159 199 aaKnown RBP1.16□□□□□ -2.22
SXM1YDR395W CYB5P40312 120 aa1.16□□□□□ -2.22
SXM1YDR395W YGL149WP53116 101 aa1.16□□□□□ -2.22
SXM1YDR395W FIT1Q04433 528 aa1.16□□□□□ -2.22
SXM1YDR395W PIN3Q06449 215 aa1.16□□□□□ -2.22
SXM1YDR395W YOR268CQ08734 132 aa1.16□□□□□ -2.22
SXM1YDR395W DAD1Q12248 94 aa1.16□□□□□ -2.22
SXM1YDR395W RPL21BQ12672 160 aaKnown RBP1.16□□□□□ -2.22
SXM1YDR395W YCL021W-AQ96VH3 125 aa1.16□□□□□ -2.22
SXM1YDR395W ATG40Q99325 256 aa1.16□□□□□ -2.22
SXM1YDR395W YFR010W-AP0C5N0 62 aa1.15□□□□□ -2.23
SXM1YDR395W MID2P36027 376 aa1.15□□□□□ -2.23
SXM1YDR395W YHR125WP38831 101 aa1.15□□□□□ -2.23
SXM1YDR395W YAR068WP39564 161 aa1.15□□□□□ -2.23
SXM1YDR395W NCA3P46955 337 aa1.15□□□□□ -2.23
SXM1YDR395W CIS3P47001 227 aa1.15□□□□□ -2.23
SXM1YDR395W SPG1P50088 95 aa1.15□□□□□ -2.23
SXM1YDR395W SCW4P53334 386 aaKnown RBP1.15□□□□□ -2.23
SXM1YDR395W PAU12P53343 120 aa1.15□□□□□ -2.23
SXM1YDR395W LIP1Q03579 150 aa1.15□□□□□ -2.23
SXM1YDR395W RIM9Q04734 239 aa1.15□□□□□ -2.23
SXM1YDR395W YHR213W-AQ8TGT4 77 aa1.15□□□□□ -2.23
SXM1YDR395W FYV5P25585 152 aa1.15□□□□□ -2.23
SXM1YDR395W ECO1P43605 281 aa1.15□□□□□ -2.23
SXM1YDR395W YFR035CP43608 114 aa1.15□□□□□ -2.23
SXM1YDR395W RPL21AQ02753 160 aaKnown RBP1.15□□□□□ -2.23
SXM1YDR395W MZM1Q03429 123 aaPredicted RBP1.15□□□□□ -2.23
SXM1YDR395W PAI3P01094 68 aa1.14□□□□□ -2.23
SXM1YDR395W PAU2P32612 120 aa1.14□□□□□ -2.23
SXM1YDR395W MRPL27P36526 146 aaPredicted RBP1.14□□□□□ -2.23
SXM1YDR395W PIR5P46999 287 aa1.14□□□□□ -2.23
SXM1YDR395W YLR296WQ05898 108 aa1.14□□□□□ -2.23
SXM1YDR395W YDL241WQ07738 123 aa1.14□□□□□ -2.23
SXM1YDR395W IRC19Q07843 230 aa1.14□□□□□ -2.23
SXM1YDR395W IRC25Q07951 179 aa1.14□□□□□ -2.23
SXM1YDR395W SUS1Q6WNK7 96 aa1.14□□□□□ -2.23
SXM1YDR395W YAL067W-AQ8TGK6 75 aa1.14□□□□□ -2.23
SXM1YDR395W PAU19P0CE85 124 aa1.14□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 25.6 ms