RNA–Protein interactions for RNA: YDR390C

UBA2, Transcript of Subunit of heterodimeric nuclear SUMO activating enzyme E1 with Aos1p, yeast

Gene UBA2, Length 1,911 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBA2	YDR390C	YBR182C-A	Q8TGU6	64 aa		4.13	□□□□□ -1.75
UBA2	YDR390C	Q0255	P03881	472 aa		4.12	□□□□□ -1.75
UBA2	YDR390C	COX9	P07255	59 aa		4.12	□□□□□ -1.75
UBA2	YDR390C	YKL044W	P36092	106 aa		4.12	□□□□□ -1.75
UBA2	YDR390C	YEL028W	P39989	153 aa		4.12	□□□□□ -1.75
UBA2	YDR390C	CDC1	P40986	491 aa		4.12	□□□□□ -1.75
UBA2	YDR390C	CIS3	P47001	227 aa		4.12	□□□□□ -1.75
UBA2	YDR390C	VPS55	P47111	140 aa		4.12	□□□□□ -1.75
UBA2	YDR390C	SWT21	P53873	357 aa	Predicted RBP	4.12	□□□□□ -1.75
UBA2	YDR390C	LSM6	Q06406	86 aa	Known RBP	4.12	□□□□□ -1.75
UBA2	YDR390C	SUT2	Q12286	268 aa		4.12	□□□□□ -1.75
UBA2	YDR390C	SMT3	Q12306	101 aa	Known RBP	4.12	□□□□□ -1.75
UBA2	YDR390C	YOR376W-A	Q3E805	51 aa		4.12	□□□□□ -1.75
UBA2	YDR390C	RRT15	Q3E811	62 aa		4.12	□□□□□ -1.75
UBA2	YDR390C	SOD1	P00445	154 aa	Known RBP	4.11	□□□□□ -1.75
UBA2	YDR390C	YGL034C	P53186	121 aa		4.11	□□□□□ -1.75
UBA2	YDR390C	SLG1	P54867	378 aa		4.11	□□□□□ -1.75
UBA2	YDR390C	YOL160W	Q08321	113 aa		4.11	□□□□□ -1.75
UBA2	YDR390C	YLR112W	Q12130	139 aa		4.11	□□□□□ -1.75
UBA2	YDR390C	STT4	P37297	1900 aa		4.11	□□□□□ -1.75
UBA2	YDR390C	RPS22A	P0C0W1	130 aa	Known RBP	4.11	□□□□□ -1.75
UBA2	YDR390C	HSP12	P22943	109 aa	Known RBP	4.11	□□□□□ -1.75
UBA2	YDR390C	VPS25	P47142	202 aa		4.11	□□□□□ -1.75
UBA2	YDR390C	YGL088W	P53151	121 aa		4.11	□□□□□ -1.75
UBA2	YDR390C	PIR3	Q03180	325 aa		4.11	□□□□□ -1.75
UBA2	YDR390C	MCH4	Q08268	501 aa		4.11	□□□□□ -1.75
UBA2	YDR390C	NCE102	Q12207	173 aa	RIP-Chip data	4.11	□□□□□ -1.75	not detected
UBA2	YDR390C	MRPL31	P14063	131 aa	Predicted RBP	4.1	□□□□□ -1.75
UBA2	YDR390C	YNL217W	P40152	326 aa		4.1	□□□□□ -1.75
UBA2	YDR390C	YNL195C	P40168	261 aa		4.1	□□□□□ -1.75
UBA2	YDR390C	YFL019C	P43576	117 aa		4.1	□□□□□ -1.75
UBA2	YDR390C	YGL193C	P53097	103 aa		4.1	□□□□□ -1.75
UBA2	YDR390C	MRH1	Q12117	320 aa	Predicted RBP	4.1	□□□□□ -1.75
UBA2	YDR390C	ERG4	P25340	473 aa		4.09	□□□□□ -1.75
UBA2	YDR390C	IMP1	P28627	190 aa		4.09	□□□□□ -1.75
UBA2	YDR390C	BOL2	P53082	120 aa		4.09	□□□□□ -1.75
UBA2	YDR390C	YIL014C-A	Q02598	104 aa		4.09	□□□□□ -1.75
UBA2	YDR390C	SPG4	Q04438	115 aa		4.09	□□□□□ -1.75
UBA2	YDR390C	YLR365W	Q7LIF2	110 aa		4.09	□□□□□ -1.75
UBA2	YDR390C	RPL16B	P26785	198 aa	Known RBP	4.09	□□□□□ -1.76
UBA2	YDR390C	MTC7	P32633	139 aa		4.09	□□□□□ -1.76
UBA2	YDR390C	TDA2	P40045	126 aa		4.09	□□□□□ -1.76
UBA2	YDR390C	YFR035C	P43608	114 aa		4.09	□□□□□ -1.76
UBA2	YDR390C	SWS2	P53937	143 aa		4.09	□□□□□ -1.76
UBA2	YDR390C	PIR1	Q03178	341 aa		4.09	□□□□□ -1.76
UBA2	YDR390C	YMR295C	Q03559	197 aa		4.09	□□□□□ -1.76
UBA2	YDR390C	NAG1	Q8TGN9	163 aa		4.09	□□□□□ -1.76
UBA2	YDR390C	ARF1	P11076	181 aa	Known RBP	4.08	□□□□□ -1.76
UBA2	YDR390C	FPR2	P32472	135 aa		4.08	□□□□□ -1.76
UBA2	YDR390C	YER187W	P40102	141 aa		4.08	□□□□□ -1.76
UBA2	YDR390C	YNL200C	P40165	246 aa	Known RBP	4.08	□□□□□ -1.76
UBA2	YDR390C	KEG1	P43614	200 aa		4.08	□□□□□ -1.76
UBA2	YDR390C	PGU1	P47180	361 aa		4.08	□□□□□ -1.76
UBA2	YDR390C	BRP1	P53194	125 aa		4.08	□□□□□ -1.76
UBA2	YDR390C	YOR186W	Q08560	144 aa		4.08	□□□□□ -1.76
UBA2	YDR390C	YDL211C	Q12121	372 aa		4.08	□□□□□ -1.76
UBA2	YDR390C	YHR213W	P0CI67	198 aa		4.07	□□□□□ -1.76
UBA2	YDR390C	UBC13	P52490	153 aa		4.07	□□□□□ -1.76
UBA2	YDR390C	YPS5	P53057	165 aa		4.07	□□□□□ -1.76
UBA2	YDR390C	CCH1	P50077	2039 aa		4.07	□□□□□ -1.76
UBA2	YDR390C	GLT1	Q12680	2145 aa	Known RBP	4.07	□□□□□ -1.76
UBA2	YDR390C	SPG1	P50088	95 aa		4.07	□□□□□ -1.76
UBA2	YDR390C	YHR214C-E	Q8TGK0	99 aa		4.07	□□□□□ -1.76
UBA2	YDR390C	YSY6	P38374	65 aa		4.06	□□□□□ -1.76
UBA2	YDR390C	RSM18	P40033	138 aa		4.06	□□□□□ -1.76
UBA2	YDR390C	RPL42A	P0CX27	106 aa	Known RBP	4.05	□□□□□ -1.76
UBA2	YDR390C	RPL42B	P0CX28	106 aa	Known RBP	4.05	□□□□□ -1.76
UBA2	YDR390C	YCR025C	P25352	136 aa		4.05	□□□□□ -1.76
UBA2	YDR390C	YKR045C	P36138	183 aa		4.05	□□□□□ -1.76
UBA2	YDR390C	SIM1	P40472	476 aa		4.05	□□□□□ -1.76
UBA2	YDR390C	YGR050C	P53231	118 aa		4.05	□□□□□ -1.76
UBA2	YDR390C	LEE1	Q02799	301 aa	Known RBP	4.05	□□□□□ -1.76
UBA2	YDR390C	ICY1	Q04329	127 aa		4.05	□□□□□ -1.76
UBA2	YDR390C	USV1	Q12132	391 aa		4.05	□□□□□ -1.76
UBA2	YDR390C	TDA8	Q6B2U8	126 aa		4.05	□□□□□ -1.76
UBA2	YDR390C	YML100W-A	Q8TGT0	57 aa		4.05	□□□□□ -1.76
UBA2	YDR390C	PIS1	P06197	220 aa	Known RBP	4.05	□□□□□ -1.76
UBA2	YDR390C	TIM12	P32830	109 aa		4.05	□□□□□ -1.76
UBA2	YDR390C	MRPL39	P36533	70 aa		4.05	□□□□□ -1.76
UBA2	YDR390C	DSE2	P38844	325 aa		4.05	□□□□□ -1.76
UBA2	YDR390C	ICS3	P47034	131 aa		4.05	□□□□□ -1.76
UBA2	YDR390C	YPL261C	Q08976	102 aa		4.05	□□□□□ -1.76
UBA2	YDR390C	RPL11B	Q3E757	174 aa	Predicted RBP	4.05	□□□□□ -1.76
UBA2	YDR390C	COA2	Q3E823	68 aa		4.05	□□□□□ -1.76
UBA2	YDR390C	YMR316C-A	I2HB70	103 aa		4.04	□□□□□ -1.76
UBA2	YDR390C	RPB9	P27999	122 aa		4.04	□□□□□ -1.76
UBA2	YDR390C	TIM17	P39515	158 aa		4.04	□□□□□ -1.76
UBA2	YDR390C	HUR1	P45820	110 aa		4.04	□□□□□ -1.76
UBA2	YDR390C	CRH1	P53301	507 aa		4.04	□□□□□ -1.76
UBA2	YDR390C	NRM1	P53718	249 aa		4.04	□□□□□ -1.76
UBA2	YDR390C	YLR012C	Q07927	99 aa		4.04	□□□□□ -1.76
UBA2	YDR390C	YAL064W-B	O13512	126 aa		4.03	□□□□□ -1.76
UBA2	YDR390C	YGR045C	P53229	120 aa		4.03	□□□□□ -1.76
UBA2	YDR390C	MET31	Q03081	177 aa		4.03	□□□□□ -1.76
UBA2	YDR390C	YOR268C	Q08734	132 aa		4.03	□□□□□ -1.76
UBA2	YDR390C	CYR1	P08678	2026 aa	Known RBP	4.03	□□□□□ -1.76
UBA2	YDR390C	YHR214C-D	P0CX93	97 aa		4.03	□□□□□ -1.76
UBA2	YDR390C	SPS100	P13130	326 aa		4.03	□□□□□ -1.76
UBA2	YDR390C	QCR9	P22289	66 aa		4.03	□□□□□ -1.76
UBA2	YDR390C	YAL064W	P39711	94 aa		4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 49.8 ms