RNA–Protein interactions for RNA: YDR087C

RRP1, Transcript of Essential evolutionarily conserved nucleolar protein, yeastyeast

Gene RRP1, Length 837 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP1YDR087C RPS28BP0C0X0 67 aaKnown RBP1.85□□□□□ -2.11
RRP1YDR087C ARC19P33204 171 aaKnown RBP1.85□□□□□ -2.11
RRP1YDR087C CIN5P40917 295 aa1.85□□□□□ -2.11
RRP1YDR087C YJR015WP47090 510 aa1.85□□□□□ -2.11
RRP1YDR087C KEI1Q06346 221 aa1.85□□□□□ -2.11
RRP1YDR087C RPS28AQ3E7X9 67 aaPredicted RBP1.85□□□□□ -2.11
RRP1YDR087C PRE1P22141 198 aaKnown RBP1.84□□□□□ -2.11
RRP1YDR087C YAR064WP39563 99 aa1.84□□□□□ -2.11
RRP1YDR087C YDC1Q02896 317 aa1.84□□□□□ -2.11
RRP1YDR087C AIM36Q03798 255 aa1.84□□□□□ -2.11
RRP1YDR087C FCY1Q12178 158 aa1.84□□□□□ -2.11
RRP1YDR087C YGL193CP53097 103 aa1.83□□□□□ -2.12
RRP1YDR087C GEP7P53171 287 aa1.83□□□□□ -2.12
RRP1YDR087C YEL014CP39999 101 aa1.82□□□□□ -2.12
RRP1YDR087C YER181CP40097 107 aa1.82□□□□□ -2.12
RRP1YDR087C EFM5P53200 248 aaKnown RBP1.82□□□□□ -2.12
RRP1YDR087C SRP21P32342 167 aa1.81□□□□□ -2.12
RRP1YDR087C HSP150P32478 413 aa1.81□□□□□ -2.12
RRP1YDR087C CYC2P38909 366 aa1.81□□□□□ -2.12
RRP1YDR087C TIM8P57744 87 aa1.81□□□□□ -2.12
RRP1YDR087C YJL218WP40892 196 aaKnown RBP1.8□□□□□ -2.12
RRP1YDR087C APS3P47064 194 aa1.8□□□□□ -2.12
RRP1YDR087C BUB2P26448 306 aaPredicted RBP1.79□□□□□ -2.12
RRP1YDR087C YBR027CP38220 110 aa1.79□□□□□ -2.12
RRP1YDR087C YIL102CP40488 101 aa1.79□□□□□ -2.12
RRP1YDR087C FMN1Q03778 218 aa1.79□□□□□ -2.12
RRP1YDR087C NMA1Q06178 401 aaKnown RBP1.79□□□□□ -2.12
RRP1YDR087C IRC19Q07843 230 aa1.79□□□□□ -2.12
RRP1YDR087C PBI2P0CT04 75 aaKnown RBP1.78□□□□□ -2.12
RRP1YDR087C PHO13P19881 312 aa1.78□□□□□ -2.12
RRP1YDR087C MRPL24P36525 258 aaPredicted RBP1.78□□□□□ -2.12
RRP1YDR087C NKP2Q06162 153 aa1.78□□□□□ -2.12
RRP1YDR087C RFU1Q08003 200 aa1.78□□□□□ -2.12
RRP1YDR087C RPS27AP35997 82 aaKnown RBP1.77□□□□□ -2.13
RRP1YDR087C RPS27BP38711 82 aa1.77□□□□□ -2.13
RRP1YDR087C RCF2P53721 224 aa1.77□□□□□ -2.13
RRP1YDR087C FIG1P38224 298 aa1.76□□□□□ -2.13
RRP1YDR087C TMA23Q03525 211 aa1.76□□□□□ -2.13
RRP1YDR087C YPD1Q07688 167 aa1.76□□□□□ -2.13
RRP1YDR087C YOL013W-AP0C272 63 aaPredicted RBP1.75□□□□□ -2.13
RRP1YDR087C DDR48P18899 430 aaKnown RBP1.75□□□□□ -2.13
RRP1YDR087C IPT1P38954 527 aa1.75□□□□□ -2.13
RRP1YDR087C YCR001WP25347 104 aa1.74□□□□□ -2.13
RRP1YDR087C ATG8P38182 117 aaRIP-Chip data1.74□□□□□ -2.13not detected
RRP1YDR087C PRS3P38689 320 aaKnown RBP1.74□□□□□ -2.13
RRP1YDR087C GIM4P40005 111 aaKnown RBP1.74□□□□□ -2.13
RRP1YDR087C SWC7Q06707 132 aa1.74□□□□□ -2.13
RRP1YDR087C OCA6Q12454 224 aa1.74□□□□□ -2.13
RRP1YDR087C YOR032W-AQ8TGS1 66 aa1.73□□□□□ -2.13
RRP1YDR087C PET20Q99373 253 aa1.73□□□□□ -2.13
RRP1YDR087C Q0144Q9ZZW2 109 aa1.73□□□□□ -2.13
RRP1YDR087C YFR010W-AP0C5N0 62 aa1.72□□□□□ -2.13
RRP1YDR087C MIX14Q04341 121 aa1.71□□□□□ -2.14
RRP1YDR087C LDB18Q07887 179 aa1.71□□□□□ -2.14
RRP1YDR087C VAM10Q08474 114 aa1.71□□□□□ -2.14
RRP1YDR087C SCS22Q6Q595 175 aa1.71□□□□□ -2.14
RRP1YDR087C RIB3Q99258 208 aa1.7□□□□□ -2.14
RRP1YDR087C ECM31P38122 312 aa1.69□□□□□ -2.14
RRP1YDR087C YIR020CP40575 100 aa1.69□□□□□ -2.14
RRP1YDR087C YGR035W-AQ45U48 73 aa1.69□□□□□ -2.14
RRP1YDR087C YGL041W-AP0C5N3 154 aa1.68□□□□□ -2.14
RRP1YDR087C FMP49A0A023PZB3 126 aa1.67□□□□□ -2.14
RRP1YDR087C RRT7Q07829 113 aa1.67□□□□□ -2.14
RRP1YDR087C RTR2Q12378 196 aa1.67□□□□□ -2.14
RRP1YDR087C YSF3P0C074 85 aaPredicted RBP1.66□□□□□ -2.14
RRP1YDR087C EST3Q03096 181 aa1.66□□□□□ -2.14
RRP1YDR087C SEN15Q04675 128 aa1.66□□□□□ -2.14
RRP1YDR087C YPR153WQ06537 140 aa1.66□□□□□ -2.14
RRP1YDR087C GPI11Q06636 219 aa1.66□□□□□ -2.14
RRP1YDR087C GTT2Q12390 233 aa1.66□□□□□ -2.14
RRP1YDR087C LSM1P47017 172 aaKnown RBP1.65□□□□□ -2.15
RRP1YDR087C HYP2P23301 157 aaKnown RBP1.64□□□□□ -2.15
RRP1YDR087C SUI1P32911 108 aaKnown RBP1.64□□□□□ -2.15
RRP1YDR087C AIM18P38884 321 aa1.64□□□□□ -2.15
RRP1YDR087C RAF1Q06891 181 aa1.64□□□□□ -2.15
RRP1YDR087C HSP12P22943 109 aaKnown RBP1.63□□□□□ -2.15
RRP1YDR087C POP7P38291 140 aa1.63□□□□□ -2.15
RRP1YDR087C HHY1P39982 102 aa1.63□□□□□ -2.15
RRP1YDR087C GPI2P46961 280 aa1.63□□□□□ -2.15
RRP1YDR087C DIE2P50076 525 aa1.63□□□□□ -2.15
RRP1YDR087C ATP19P81451 68 aa1.63□□□□□ -2.15
RRP1YDR087C COX5BP00425 151 aa1.62□□□□□ -2.15
RRP1YDR087C YHR214C-DP0CX93 97 aa1.62□□□□□ -2.15
RRP1YDR087C ACP1P32463 125 aa1.62□□□□□ -2.15
RRP1YDR087C IPI1P38803 334 aaPredicted RBP1.62□□□□□ -2.15
RRP1YDR087C MOG1P47123 218 aa1.62□□□□□ -2.15
RRP1YDR087C SPC2Q04969 178 aa1.62□□□□□ -2.15
RRP1YDR087C YJL197C-AP0C5P0 93 aa1.61□□□□□ -2.15
RRP1YDR087C YGR201CP42936 225 aa1.61□□□□□ -2.15
RRP1YDR087C YNL122CP53921 115 aaPredicted RBP1.61□□□□□ -2.15
RRP1YDR087C YCL001W-AP87012 153 aa1.61□□□□□ -2.15
RRP1YDR087C SED1Q01589 338 aa1.61□□□□□ -2.15
RRP1YDR087C YMR320WQ04897 101 aa1.61□□□□□ -2.15
RRP1YDR087C PET54P10834 293 aa1.6□□□□□ -2.15
RRP1YDR087C YCR099CP25657 155 aa1.6□□□□□ -2.15
RRP1YDR087C PKR1Q03880 122 aaKnown RBP1.6□□□□□ -2.15
RRP1YDR087C NHP6AP11632 93 aaKnown RBP1.59□□□□□ -2.15
RRP1YDR087C AUA1P32450 94 aa1.59□□□□□ -2.15
RRP1YDR087C YGR042WP53227 271 aa1.59□□□□□ -2.15
RRP1YDR087C RAV2Q03956 351 aa1.59□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 9.1 ms