RNA–Protein interactions for RNA: YDR052C

DBF4, Transcript of Regulatory subunit of Cdc7p-Dbf4p kinase complex, yeast

Gene DBF4, Length 2,115 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBF4	YDR052C	MRS3	P10566	314 aa		4.25	□□□□□ -1.73
DBF4	YDR052C	PET8	P38921	284 aa		4.25	□□□□□ -1.73
DBF4	YDR052C	MBB1	P39534	108 aa		4.25	□□□□□ -1.73
DBF4	YDR052C	YGR050C	P53231	118 aa		4.25	□□□□□ -1.73
DBF4	YDR052C	MRPL31	P14063	131 aa	Predicted RBP	4.25	□□□□□ -1.73
DBF4	YDR052C	RPB8	P20436	146 aa		4.25	□□□□□ -1.73
DBF4	YDR052C	DSS4	P32601	143 aa		4.25	□□□□□ -1.73
DBF4	YDR052C	ATP19	P81451	68 aa		4.25	□□□□□ -1.73
DBF4	YDR052C	YDL022C-A	P0C5L6	82 aa		4.24	□□□□□ -1.73
DBF4	YDR052C	YHR180W	P38868	163 aa		4.24	□□□□□ -1.73
DBF4	YDR052C	PEX22	P39718	180 aa		4.24	□□□□□ -1.73
DBF4	YDR052C	CUZ1	P53899	274 aa		4.24	□□□□□ -1.73
DBF4	YDR052C	RLM1	Q12224	676 aa		4.24	□□□□□ -1.73
DBF4	YDR052C	FPR2	P32472	135 aa		4.24	□□□□□ -1.73
DBF4	YDR052C	SWS2	P53937	143 aa		4.24	□□□□□ -1.73
DBF4	YDR052C	YDR209C	Q03480	137 aa		4.24	□□□□□ -1.73
DBF4	YDR052C	YLR012C	Q07927	99 aa		4.24	□□□□□ -1.73
DBF4	YDR052C	PBI2	P0CT04	75 aa	Known RBP	4.23	□□□□□ -1.73
DBF4	YDR052C	RPL42A	P0CX27	106 aa	Known RBP	4.23	□□□□□ -1.73
DBF4	YDR052C	RPL42B	P0CX28	106 aa	Known RBP	4.23	□□□□□ -1.73
DBF4	YDR052C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
DBF4	YDR052C	YPL261C	Q08976	102 aa		4.23	□□□□□ -1.73
DBF4	YDR052C	RRT15	Q3E811	62 aa		4.23	□□□□□ -1.73
DBF4	YDR052C	AQY1	P0CD91	305 aa		4.22	□□□□□ -1.73
DBF4	YDR052C	BET1	P22804	142 aa		4.22	□□□□□ -1.73
DBF4	YDR052C	YIA6	P40556	373 aa		4.22	□□□□□ -1.73
DBF4	YDR052C	YFL051C	P43552	160 aa		4.22	□□□□□ -1.73
DBF4	YDR052C	MIX14	Q04341	121 aa		4.22	□□□□□ -1.73
DBF4	YDR052C	YOL029C	Q08187	201 aa		4.22	□□□□□ -1.73
DBF4	YDR052C	YOL118C	Q08259	102 aa		4.22	□□□□□ -1.73
DBF4	YDR052C	DAT1	P13483	248 aa	Known RBP	4.22	□□□□□ -1.73
DBF4	YDR052C	VTC1	P40046	129 aa	RIP-Chip data	4.22	□□□□□ -1.73	not detected
DBF4	YDR052C	IRC23	Q08416	157 aa		4.22	□□□□□ -1.73
DBF4	YDR052C	YDR381C-A	Q3E6R5	114 aa		4.22	□□□□□ -1.73
DBF4	YDR052C	IGO2	Q9P305	131 aa		4.22	□□□□□ -1.73
DBF4	YDR052C	RPL20A	P0CX23	172 aa	Known RBP	4.21	□□□□□ -1.74
DBF4	YDR052C	RPL20B	P0CX24	172 aa	Predicted RBP	4.21	□□□□□ -1.74
DBF4	YDR052C	RPL18A	P0CX49	186 aa	Known RBP	4.21	□□□□□ -1.74
DBF4	YDR052C	RPL18B	P0CX50	186 aa	Known RBP	4.21	□□□□□ -1.74
DBF4	YDR052C	YHR173C	P38864	112 aa		4.21	□□□□□ -1.74
DBF4	YDR052C	TOM7	P53507	60 aa		4.21	□□□□□ -1.74
DBF4	YDR052C	PIR1	Q03178	341 aa		4.21	□□□□□ -1.74
DBF4	YDR052C	RRS1	Q08746	203 aa	Known RBP	4.21	□□□□□ -1.74
DBF4	YDR052C	YPR053C	Q6Q5F3	151 aa		4.21	□□□□□ -1.74
DBF4	YDR052C	BLM10	P43583	2143 aa		4.21	□□□□□ -1.74
DBF4	YDR052C	YKR032W	P36127	104 aa		4.21	□□□□□ -1.74
DBF4	YDR052C	SWD3	P38123	315 aa		4.21	□□□□□ -1.74
DBF4	YDR052C	PAU7	P39545	55 aa		4.21	□□□□□ -1.74
DBF4	YDR052C	YER187W	P40102	141 aa		4.21	□□□□□ -1.74
DBF4	YDR052C	SHH4	Q06236	168 aa		4.21	□□□□□ -1.74
DBF4	YDR052C	RPS8A	P0CX39	200 aa	Known RBP	4.2	□□□□□ -1.74
DBF4	YDR052C	RPS8B	P0CX40	200 aa	Known RBP	4.2	□□□□□ -1.74
DBF4	YDR052C	UBC4	P15731	148 aa		4.2	□□□□□ -1.74
DBF4	YDR052C	HAL1	Q01766	294 aa		4.2	□□□□□ -1.74
DBF4	YDR052C	YOR387C	Q08910	206 aa		4.2	□□□□□ -1.74
DBF4	YDR052C	YLR112W	Q12130	139 aa		4.2	□□□□□ -1.74
DBF4	YDR052C	YOR192C-C	Q3E736	78 aa		4.2	□□□□□ -1.74
DBF4	YDR052C	YBL081W	P38180	368 aa	Known RBP	4.19	□□□□□ -1.74
DBF4	YDR052C	VHS2	P40463	436 aa		4.19	□□□□□ -1.74
DBF4	YDR052C	SIM1	P40472	476 aa		4.19	□□□□□ -1.74
DBF4	YDR052C	YFL019C	P43576	117 aa		4.19	□□□□□ -1.74
DBF4	YDR052C	NRM1	P53718	249 aa		4.19	□□□□□ -1.74
DBF4	YDR052C	NIP7	Q08962	181 aa	Known RBP	4.19	□□□□□ -1.74
DBF4	YDR052C	YDR102C	Q03864	110 aa		4.19	□□□□□ -1.74
DBF4	YDR052C	EMC6	Q12431	108 aa		4.19	□□□□□ -1.74
DBF4	YDR052C	RPL28	P02406	149 aa	Known RBP	4.18	□□□□□ -1.74
DBF4	YDR052C	RPL16B	P26785	198 aa	Known RBP	4.18	□□□□□ -1.74
DBF4	YDR052C	ISF1	P32488	338 aa		4.18	□□□□□ -1.74
DBF4	YDR052C	YHP1	Q04116	353 aa		4.18	□□□□□ -1.74
DBF4	YDR052C	TIM22	Q12328	207 aa		4.18	□□□□□ -1.74
DBF4	YDR052C	RPL11B	Q3E757	174 aa	Predicted RBP	4.18	□□□□□ -1.74
DBF4	YDR052C	RPS14A	P06367	137 aa	Known RBP	4.18	□□□□□ -1.74
DBF4	YDR052C	RPL32	P38061	130 aa	Known RBP	4.18	□□□□□ -1.74
DBF4	YDR052C	YNL217W	P40152	326 aa		4.18	□□□□□ -1.74
DBF4	YDR052C	YFR054C	P43622	192 aa		4.18	□□□□□ -1.74
DBF4	YDR052C	MIC10	Q96VH5	97 aa		4.18	□□□□□ -1.74
DBF4	YDR052C	YBR209W	P38311	105 aa		4.17	□□□□□ -1.74
DBF4	YDR052C	YSY6	P38374	65 aa		4.17	□□□□□ -1.74
DBF4	YDR052C	VEL1	P53058	206 aa		4.17	□□□□□ -1.74
DBF4	YDR052C	YNL046W	P53956	172 aa		4.17	□□□□□ -1.74
DBF4	YDR052C	PFY1	P07274	126 aa		4.16	□□□□□ -1.74
DBF4	YDR052C	GAT4	P40569	121 aa		4.16	□□□□□ -1.74
DBF4	YDR052C	NCA3	P46955	337 aa		4.16	□□□□□ -1.74
DBF4	YDR052C	HNT2	P49775	206 aa		4.16	□□□□□ -1.74
DBF4	YDR052C	FIT2	Q08906	153 aa		4.16	□□□□□ -1.74
DBF4	YDR052C	TDA8	Q6B2U8	126 aa		4.16	□□□□□ -1.74
DBF4	YDR052C	HSP12	P22943	109 aa	Known RBP	4.16	□□□□□ -1.74
DBF4	YDR052C	OST1	P41543	476 aa	Known RBP	4.16	□□□□□ -1.74
DBF4	YDR052C	PBA1	Q05778	276 aa		4.16	□□□□□ -1.74
DBF4	YDR052C	YOR268C	Q08734	132 aa		4.16	□□□□□ -1.74
DBF4	YDR052C	YOR343C	Q12484	108 aa		4.16	□□□□□ -1.74
DBF4	YDR052C	ARF2	P19146	181 aa	Known RBP	4.15	□□□□□ -1.74
DBF4	YDR052C	PCL2	P25693	308 aa		4.15	□□□□□ -1.74
DBF4	YDR052C	AIM19	P40502	157 aa		4.15	□□□□□ -1.74
DBF4	YDR052C	YDR246W-A	Q3E763	66 aa		4.15	□□□□□ -1.74
DBF4	YDR052C	RPL11A	P0C0W9	174 aa	Known RBP	4.15	□□□□□ -1.75
DBF4	YDR052C	MXR2	P25566	168 aa		4.15	□□□□□ -1.75
DBF4	YDR052C	HMRA2	P0CY13	119 aa		4.14	□□□□□ -1.75
DBF4	YDR052C	PIR5	P46999	287 aa		4.14	□□□□□ -1.75
DBF4	YDR052C	UBC13	P52490	153 aa		4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 41.5 ms