RNA–Protein interactions for RNA: YDR027C

VPS54, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS54, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS54YDR027C SPC3Q12133 184 aa0.8□□□□□ -2.28
VPS54YDR027C DGK1Q12382 290 aa0.8□□□□□ -2.28
VPS54YDR027C AUA1P32450 94 aa0.8□□□□□ -2.28
VPS54YDR027C HYM1P32464 399 aa0.8□□□□□ -2.28
VPS54YDR027C SFT2P38166 215 aa0.8□□□□□ -2.28
VPS54YDR027C PEP8P40335 379 aa0.8□□□□□ -2.28
VPS54YDR027C GAT4P40569 121 aa0.8□□□□□ -2.28
VPS54YDR027C YGL101WP53144 215 aa0.8□□□□□ -2.28
VPS54YDR027C RSM19P53733 91 aaPredicted RBP0.8□□□□□ -2.28
VPS54YDR027C HSK3P69852 69 aa0.8□□□□□ -2.28
VPS54YDR027C YKR005CQ02203 525 aa0.8□□□□□ -2.28
VPS54YDR027C ELC1Q03071 99 aa0.8□□□□□ -2.28
VPS54YDR027C YMR090WQ04304 227 aaKnown RBP0.8□□□□□ -2.28
VPS54YDR027C YLR118CQ12354 227 aa0.8□□□□□ -2.28
VPS54YDR027C YFR010W-AP0C5N0 62 aa0.79□□□□□ -2.28
VPS54YDR027C HAP3P13434 144 aa0.79□□□□□ -2.28
VPS54YDR027C UBC5P15732 148 aa0.79□□□□□ -2.28
VPS54YDR027C MDH2P22133 377 aa0.79□□□□□ -2.28
VPS54YDR027C CSH1P38287 376 aa0.79□□□□□ -2.28
VPS54YDR027C NSG1P38837 291 aa0.79□□□□□ -2.28
VPS54YDR027C YEL073CP39974 107 aa0.79□□□□□ -2.28
VPS54YDR027C GNA1P43577 159 aaPredicted RBP0.79□□□□□ -2.28
VPS54YDR027C XPT1P47165 209 aa0.79□□□□□ -2.28
VPS54YDR027C KNH1P50112 268 aa0.79□□□□□ -2.28
VPS54YDR027C GEP7P53171 287 aa0.79□□□□□ -2.28
VPS54YDR027C ERV14P53173 138 aa0.79□□□□□ -2.28
VPS54YDR027C POP3P53833 195 aaPredicted RBP0.79□□□□□ -2.28
VPS54YDR027C LSM3P57743 89 aaKnown RBP0.79□□□□□ -2.28
VPS54YDR027C VPS28Q02767 242 aa0.79□□□□□ -2.28
VPS54YDR027C FMN1Q03778 218 aa0.79□□□□□ -2.28
VPS54YDR027C THI74Q04083 370 aa0.79□□□□□ -2.28
VPS54YDR027C RNH202Q05635 350 aa0.79□□□□□ -2.28
VPS54YDR027C RRT7Q07829 113 aa0.79□□□□□ -2.28
VPS54YDR027C IRC23Q08416 157 aa0.79□□□□□ -2.28
VPS54YDR027C MPD1Q12404 318 aaKnown RBP0.79□□□□□ -2.28
VPS54YDR027C UBI4P0CG63 381 aaKnown RBP0.79□□□□□ -2.28
VPS54YDR027C RPL2AP0CX45 254 aaKnown RBP0.79□□□□□ -2.28
VPS54YDR027C RPL2BP0CX46 254 aaKnown RBP0.79□□□□□ -2.28
VPS54YDR027C MRPL44P19956 98 aa0.79□□□□□ -2.28
VPS54YDR027C PAM17P36147 197 aa0.79□□□□□ -2.28
VPS54YDR027C ECM31P38122 312 aa0.79□□□□□ -2.28
VPS54YDR027C YBR219CP38317 127 aa0.79□□□□□ -2.28
VPS54YDR027C IPT1P38954 527 aa0.79□□□□□ -2.28
VPS54YDR027C YER135CP40082 130 aa0.79□□□□□ -2.28
VPS54YDR027C YNL200CP40165 246 aaKnown RBP0.79□□□□□ -2.28
VPS54YDR027C ATP19P81451 68 aa0.79□□□□□ -2.28
VPS54YDR027C YCL001W-AP87012 153 aa0.79□□□□□ -2.28
VPS54YDR027C KEI1Q06346 221 aa0.79□□□□□ -2.28
VPS54YDR027C GTT2Q12390 233 aa0.79□□□□□ -2.28
VPS54YDR027C WIP1Q2V2P8 89 aa0.79□□□□□ -2.28
VPS54YDR027C COA6Q3E846 104 aa0.79□□□□□ -2.28
VPS54YDR027C FMP49A0A023PZB3 126 aa0.78□□□□□ -2.28
VPS54YDR027C ATP5P09457 212 aa0.78□□□□□ -2.28
VPS54YDR027C YCR099CP25657 155 aa0.78□□□□□ -2.28
VPS54YDR027C RPA12P32529 125 aaKnown RBP0.78□□□□□ -2.28
VPS54YDR027C UGX2P32772 223 aa0.78□□□□□ -2.28
VPS54YDR027C YBR209WP38311 105 aa0.78□□□□□ -2.28
VPS54YDR027C SPC25P40014 221 aa0.78□□□□□ -2.28
VPS54YDR027C RPL13BP40212 199 aaKnown RBP0.78□□□□□ -2.28
VPS54YDR027C YPL073CP40323 161 aa0.78□□□□□ -2.28
VPS54YDR027C YFL051CP43552 160 aa0.78□□□□□ -2.28
VPS54YDR027C FIP1P45976 327 aa0.78□□□□□ -2.28
VPS54YDR027C GAL83Q04739 417 aa0.78□□□□□ -2.28
VPS54YDR027C ANT1Q06497 328 aa0.78□□□□□ -2.28
VPS54YDR027C NAT5Q08689 176 aa0.78□□□□□ -2.28
VPS54YDR027C RAD28Q12021 506 aa0.78□□□□□ -2.28
VPS54YDR027C HUT1Q12520 339 aa0.78□□□□□ -2.28
VPS54YDR027C RPL13AQ12690 199 aaPredicted RBP0.78□□□□□ -2.28
VPS54YDR027C YKL068W-AQ3E826 78 aa0.78□□□□□ -2.28
VPS54YDR027C RIB3Q99258 208 aa0.78□□□□□ -2.28
VPS54YDR027C DDP1Q99321 188 aaKnown RBP0.78□□□□□ -2.28
VPS54YDR027C GPA2P10823 449 aa0.78□□□□□ -2.29
VPS54YDR027C SEC11P15367 167 aa0.78□□□□□ -2.29
VPS54YDR027C ANB1P19211 157 aa0.78□□□□□ -2.29
VPS54YDR027C SPT14P32363 452 aa0.78□□□□□ -2.29
VPS54YDR027C SNF11P38956 169 aa0.78□□□□□ -2.29
VPS54YDR027C DLS1P40366 167 aa0.78□□□□□ -2.29
VPS54YDR027C SAY1P53324 424 aa0.78□□□□□ -2.29
VPS54YDR027C YMR295CQ03559 197 aa0.78□□□□□ -2.29
VPS54YDR027C RUB1Q03919 77 aa0.78□□□□□ -2.29
VPS54YDR027C CUE4Q04201 117 aaPredicted RBP0.78□□□□□ -2.29
VPS54YDR027C YLR162WQ06235 118 aa0.78□□□□□ -2.29
VPS54YDR027C SCP1Q08873 200 aa0.78□□□□□ -2.29
VPS54YDR027C YDL180WQ12301 547 aa0.78□□□□□ -2.29
VPS54YDR027C RPL30P14120 105 aaKnown RBP0.77□□□□□ -2.29
VPS54YDR027C SRB6P32570 121 aa0.77□□□□□ -2.29
VPS54YDR027C YHL005CP38752 130 aa0.77□□□□□ -2.29
VPS54YDR027C RPL14BP38754 138 aaKnown RBP0.77□□□□□ -2.29
VPS54YDR027C FYV4P38783 130 aaPredicted RBP0.77□□□□□ -2.29
VPS54YDR027C DIE2P50076 525 aa0.77□□□□□ -2.29
VPS54YDR027C YHP1Q04116 353 aa0.77□□□□□ -2.29
VPS54YDR027C MIX14Q04341 121 aa0.77□□□□□ -2.29
VPS54YDR027C SHH3Q04487 196 aa0.77□□□□□ -2.29
VPS54YDR027C RAF1Q06891 181 aa0.77□□□□□ -2.29
VPS54YDR027C YER039C-AP0CD97 72 aa0.77□□□□□ -2.29
VPS54YDR027C SHB17P36136 271 aaKnown RBP0.77□□□□□ -2.29
VPS54YDR027C SLM6P38343 150 aa0.77□□□□□ -2.29
VPS54YDR027C YHL018WP38744 120 aaPredicted RBP0.77□□□□□ -2.29
VPS54YDR027C BUD25P85052 153 aa0.77□□□□□ -2.29
VPS54YDR027C CSI2Q08054 341 aa0.77□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 8.9 ms