RNA–Protein interactions for RNA: YDL003W

MCD1, Transcript of Essential alpha-kleisin subunit of the cohesin complex, yeastyeast

Gene MCD1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MCD1YDL003W GLE2P40066 365 aa1.8□□□□□ -2.12
MCD1YDL003W YNL217WP40152 326 aa1.8□□□□□ -2.12
MCD1YDL003W LST8P41318 303 aa1.8□□□□□ -2.12
MCD1YDL003W FIP1P45976 327 aa1.8□□□□□ -2.12
MCD1YDL003W EAF6P47128 113 aa1.8□□□□□ -2.12
MCD1YDL003W PIR1Q03178 341 aa1.8□□□□□ -2.12
MCD1YDL003W YMR321CQ04898 105 aa1.8□□□□□ -2.12
MCD1YDL003W CSR2Q12734 1121 aa1.8□□□□□ -2.12
MCD1YDL003W DFM1Q12743 341 aaKnown RBP1.8□□□□□ -2.12
MCD1YDL003W YLR412C-AQ3E742 68 aa1.8□□□□□ -2.12
MCD1YDL003W YBR255C-AQ3E776 120 aa1.8□□□□□ -2.12
MCD1YDL003W FLO9P39712 1322 aa1.79□□□□□ -2.12
MCD1YDL003W YER145C-AA0A023PYF4 145 aa1.79□□□□□ -2.12
MCD1YDL003W RPL2AP0CX45 254 aaKnown RBP1.79□□□□□ -2.12
MCD1YDL003W RPL2BP0CX46 254 aaKnown RBP1.79□□□□□ -2.12
MCD1YDL003W RPL30P14120 105 aaKnown RBP1.79□□□□□ -2.12
MCD1YDL003W YMR31P19955 123 aa1.79□□□□□ -2.12
MCD1YDL003W YRA2P36036 203 aaKnown RBP RIP-Chip data1.79□□□□□ -2.12not detected
MCD1YDL003W SMP1P38128 452 aa1.79□□□□□ -2.12
MCD1YDL003W SFT2P38166 215 aa1.79□□□□□ -2.12
MCD1YDL003W YHL018WP38744 120 aaPredicted RBP1.79□□□□□ -2.12
MCD1YDL003W YNL194CP40169 301 aa1.79□□□□□ -2.12
MCD1YDL003W YFL051CP43552 160 aa1.79□□□□□ -2.12
MCD1YDL003W NCA3P46955 337 aa1.79□□□□□ -2.12
MCD1YDL003W UBC13P52490 153 aa1.79□□□□□ -2.12
MCD1YDL003W ALG13P53178 202 aa1.79□□□□□ -2.12
MCD1YDL003W YGR050CP53231 118 aa1.79□□□□□ -2.12
MCD1YDL003W HST4P53688 370 aa1.79□□□□□ -2.12
MCD1YDL003W TIM10P87108 93 aa1.79□□□□□ -2.12
MCD1YDL003W COX12Q01519 83 aa1.79□□□□□ -2.12
MCD1YDL003W MIX17Q03667 156 aa1.79□□□□□ -2.12
MCD1YDL003W IRC19Q07843 230 aa1.79□□□□□ -2.12
MCD1YDL003W RLM1Q12224 676 aa1.79□□□□□ -2.12
MCD1YDL003W YDR119W-AQ2V2P9 66 aa1.79□□□□□ -2.12
MCD1YDL003W BOL1Q3E793 110 aa1.79□□□□□ -2.12
MCD1YDL003W IGO2Q9P305 131 aa1.79□□□□□ -2.12
MCD1YDL003W MRPL31P14063 131 aaPredicted RBP1.78□□□□□ -2.12
MCD1YDL003W RFA2P26754 273 aaKnown RBP1.78□□□□□ -2.12
MCD1YDL003W RPL16BP26785 198 aaKnown RBP1.78□□□□□ -2.12
MCD1YDL003W IMP1P28627 190 aa1.78□□□□□ -2.12
MCD1YDL003W TIM17P39515 158 aa1.78□□□□□ -2.12
MCD1YDL003W RRT13P40042 185 aa1.78□□□□□ -2.12
MCD1YDL003W YDR209CQ03480 137 aa1.78□□□□□ -2.12
MCD1YDL003W PBA1Q05778 276 aa1.78□□□□□ -2.12
MCD1YDL003W RRS1Q08746 203 aaKnown RBP1.78□□□□□ -2.12
MCD1YDL003W YPL038W-AQ3E7B4 63 aa1.78□□□□□ -2.12
MCD1YDL003W YNL277W-AQ3E7Z0 62 aa1.78□□□□□ -2.12
MCD1YDL003W PIS1P06197 220 aaKnown RBP1.77□□□□□ -2.13
MCD1YDL003W CSH1P38287 376 aa1.77□□□□□ -2.13
MCD1YDL003W YSY6P38374 65 aa1.77□□□□□ -2.13
MCD1YDL003W SVP26P38869 228 aa1.77□□□□□ -2.13
MCD1YDL003W YAR029WP39549 74 aa1.77□□□□□ -2.13
MCD1YDL003W VHS2P40463 436 aa1.77□□□□□ -2.13
MCD1YDL003W VPS55P47111 140 aa1.77□□□□□ -2.13
MCD1YDL003W VEL1P53058 206 aa1.77□□□□□ -2.13
MCD1YDL003W MMS2P53152 137 aa1.77□□□□□ -2.13
MCD1YDL003W YGR164WP53291 111 aa1.77□□□□□ -2.13
MCD1YDL003W DAD4P69851 72 aa1.77□□□□□ -2.13
MCD1YDL003W SHH4Q06236 168 aa1.77□□□□□ -2.13
MCD1YDL003W MSA1Q08471 629 aa1.77□□□□□ -2.13
MCD1YDL003W FIT2Q08906 153 aa1.77□□□□□ -2.13
MCD1YDL003W YOR029WQ12243 111 aa1.77□□□□□ -2.13
MCD1YDL003W YGL258W-AQ3E740 77 aa1.77□□□□□ -2.13
MCD1YDL003W YCL021W-AQ96VH3 125 aa1.77□□□□□ -2.13
MCD1YDL003W RPL18AP0CX49 186 aaKnown RBP1.77□□□□□ -2.13
MCD1YDL003W RPL18BP0CX50 186 aaKnown RBP1.77□□□□□ -2.13
MCD1YDL003W RPS16AP0CX51 143 aaKnown RBP1.77□□□□□ -2.13
MCD1YDL003W RPS16BP0CX52 143 aaKnown RBP1.77□□□□□ -2.13
MCD1YDL003W MRS3P10566 314 aa1.77□□□□□ -2.13
MCD1YDL003W TOM40P23644 387 aaKnown RBP1.77□□□□□ -2.13
MCD1YDL003W FPR2P32472 135 aa1.77□□□□□ -2.13
MCD1YDL003W SWD3P38123 315 aa1.77□□□□□ -2.13
MCD1YDL003W MTC6P38849 526 aa1.77□□□□□ -2.13
MCD1YDL003W MBB1P39534 108 aa1.77□□□□□ -2.13
MCD1YDL003W AIM19P40502 157 aa1.77□□□□□ -2.13
MCD1YDL003W YIA6P40556 373 aa1.77□□□□□ -2.13
MCD1YDL003W SFT1P43682 97 aa1.77□□□□□ -2.13
MCD1YDL003W TOM7P53507 60 aa1.77□□□□□ -2.13
MCD1YDL003W RSM19P53733 91 aaPredicted RBP1.77□□□□□ -2.13
MCD1YDL003W SWS2P53937 143 aa1.77□□□□□ -2.13
MCD1YDL003W HSK3P69852 69 aa1.77□□□□□ -2.13
MCD1YDL003W NCE101Q02820 53 aa1.77□□□□□ -2.13
MCD1YDL003W YLR194CQ05777 254 aa1.77□□□□□ -2.13
MCD1YDL003W YOR387CQ08910 206 aa1.77□□□□□ -2.13
MCD1YDL003W YOR343CQ12484 108 aa1.77□□□□□ -2.13
MCD1YDL003W HMRA2P0CY13 119 aa1.76□□□□□ -2.13
MCD1YDL003W ROX3P25046 220 aa1.76□□□□□ -2.13
MCD1YDL003W SRX1P36077 127 aa1.76□□□□□ -2.13
MCD1YDL003W MED6P38782 295 aa1.76□□□□□ -2.13
MCD1YDL003W LYS1P38998 373 aaRIP-Chip data1.76□□□□□ -2.13not detected
MCD1YDL003W HUA1P40325 198 aa1.76□□□□□ -2.13
MCD1YDL003W SIM1P40472 476 aa1.76□□□□□ -2.13
MCD1YDL003W YIL029CP40538 142 aa1.76□□□□□ -2.13
MCD1YDL003W SGN1P40561 250 aaKnown RBP RIP-Chip data1.76□□□□□ -2.13not detected
MCD1YDL003W CIS3P47001 227 aa1.76□□□□□ -2.13
MCD1YDL003W HAL1Q01766 294 aa1.76□□□□□ -2.13
MCD1YDL003W YMR181CQ03231 154 aa1.76□□□□□ -2.13
MCD1YDL003W YDR381C-AQ3E6R5 114 aa1.76□□□□□ -2.13
MCD1YDL003W KSH1Q8TGJ3 72 aa1.76□□□□□ -2.13
MCD1YDL003W YAL064W-BO13512 126 aa1.75□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 47.2 ms