RNA–Protein interactions for RNA: YCR096C

HMRA2, Transcript of Silenced copy of a2 at HMR, yeast

Gene HMRA2, Length 360 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HMRA2	YCR096C	YDR366C	P87287	132 aa		-0.68	□□□□□ -2.52
HMRA2	YCR096C	YIL014C-A	Q02598	104 aa		-0.68	□□□□□ -2.52
HMRA2	YCR096C	PKR1	Q03880	122 aa	Known RBP	-0.68	□□□□□ -2.52
HMRA2	YCR096C	YGL041C-B	Q3E750	60 aa		-0.68	□□□□□ -2.52
HMRA2	YCR096C	YJL197C-A	P0C5P0	93 aa		-0.7	□□□□□ -2.52
HMRA2	YCR096C	GCV3	P39726	170 aa	Predicted RBP	-0.7	□□□□□ -2.52
HMRA2	YCR096C	VPS55	P47111	140 aa		-0.7	□□□□□ -2.52
HMRA2	YCR096C	ELC1	Q03071	99 aa		-0.7	□□□□□ -2.52
HMRA2	YCR096C	YLR285C-A	Q3E771	56 aa		-0.7	□□□□□ -2.52
HMRA2	YCR096C	PHS1	P40857	217 aa		-0.71	□□□□□ -2.52
HMRA2	YCR096C	TVP18	Q04767	167 aa		-0.71	□□□□□ -2.52
HMRA2	YCR096C	RIM15	P43565	1770 aa		-0.71	□□□□□ -2.52
HMRA2	YCR096C	ECM5	Q03214	1411 aa		-0.72	□□□□□ -2.52
HMRA2	YCR096C	MOG1	P47123	218 aa		-0.72	□□□□□ -2.52
HMRA2	YCR096C	YGR039W	P53225	103 aa		-0.72	□□□□□ -2.52
HMRA2	YCR096C	YPK9	Q12697	1472 aa		-0.73	□□□□□ -2.53
HMRA2	YCR096C	CYB5	P40312	120 aa		-0.73	□□□□□ -2.53
HMRA2	YCR096C	ERV14	P53173	138 aa		-0.73	□□□□□ -2.53
HMRA2	YCR096C	DNA2	P38859	1522 aa		-0.74	□□□□□ -2.53
HMRA2	YCR096C	SEC59	P20048	519 aa		-0.74	□□□□□ -2.53
HMRA2	YCR096C	RPC19	P28000	142 aa	Known RBP	-0.74	□□□□□ -2.53
HMRA2	YCR096C	PAU12	P53343	120 aa		-0.74	□□□□□ -2.53
HMRA2	YCR096C	RBL2	P48606	106 aa	Known RBP	-0.75	□□□□□ -2.53
HMRA2	YCR096C	YOR376W-A	Q3E805	51 aa		-0.75	□□□□□ -2.53
HMRA2	YCR096C	COX23	P38824	151 aa		-0.76	□□□□□ -2.53
HMRA2	YCR096C	YKL044W	P36092	106 aa		-0.77	□□□□□ -2.53
HMRA2	YCR096C	GAT4	P40569	121 aa		-0.77	□□□□□ -2.53
HMRA2	YCR096C	GPI19	Q04082	140 aa		-0.77	□□□□□ -2.53
HMRA2	YCR096C	SMD2	Q06217	110 aa	Known RBP	-0.77	□□□□□ -2.53
HMRA2	YCR096C	RPO41	P13433	1351 aa	Known RBP	-0.79	□□□□□ -2.54
HMRA2	YCR096C	YHR130C	P38834	111 aa		-0.79	□□□□□ -2.54
HMRA2	YCR096C	YIL086C	P40503	102 aa		-0.79	□□□□□ -2.54
HMRA2	YCR096C	CNL1	Q06333	122 aa		-0.79	□□□□□ -2.54
HMRA2	YCR096C	HYM1	P32464	399 aa		-0.8	□□□□□ -2.54
HMRA2	YCR096C	ARC19	P33204	171 aa	Known RBP	-0.8	□□□□□ -2.54
HMRA2	YCR096C	SHU1	P38751	150 aa		-0.8	□□□□□ -2.54
HMRA2	YCR096C	YIR020C	P40575	100 aa		-0.8	□□□□□ -2.54
HMRA2	YCR096C	SLO1	Q3E784	85 aa		-0.8	□□□□□ -2.54
HMRA2	YCR096C	YNL277W-A	Q3E7Z0	62 aa		-0.8	□□□□□ -2.54
HMRA2	YCR096C	OST5	Q92316	86 aa		-0.8	□□□□□ -2.54
HMRA2	YCR096C	HMRA2	P0CY13	119 aa		-0.81	□□□□□ -2.54
HMRA2	YCR096C	YBR016W	P38216	128 aa		-0.81	□□□□□ -2.54
HMRA2	YCR096C	SFT1	P43682	97 aa		-0.81	□□□□□ -2.54
HMRA2	YCR096C	YOR097C	Q12274	175 aa	Predicted RBP	-0.81	□□□□□ -2.54
HMRA2	YCR096C	PCC1	Q3E833	88 aa		-0.81	□□□□□ -2.54
HMRA2	YCR096C	TY1B-BL	Q12490	1755 aa		-0.81	□□□□□ -2.54
HMRA2	YCR096C	YRF1-2	P40105	1681 aa		-0.81	□□□□□ -2.54
HMRA2	YCR096C	RPS11A	P0CX47	156 aa	Known RBP	-0.82	□□□□□ -2.54
HMRA2	YCR096C	RPS11B	P0CX48	156 aa	Known RBP	-0.82	□□□□□ -2.54
HMRA2	YCR096C	PAU24	P38155	120 aa		-0.82	□□□□□ -2.54
HMRA2	YCR096C	SNF11	P38956	169 aa		-0.82	□□□□□ -2.54
HMRA2	YCR096C	PAM16	P42949	149 aa		-0.82	□□□□□ -2.54
HMRA2	YCR096C	MPC1	P53157	130 aa	Known RBP	-0.82	□□□□□ -2.54
HMRA2	YCR096C	YGR042W	P53227	271 aa		-0.82	□□□□□ -2.54
HMRA2	YCR096C	TOP2	P06786	1428 aa	Known RBP	-0.82	□□□□□ -2.54
HMRA2	YCR096C	ADK1	P07170	222 aa	Known RBP	-0.83	□□□□□ -2.54
HMRA2	YCR096C	ACP1	P32463	125 aa		-0.83	□□□□□ -2.54
HMRA2	YCR096C	YDR210W	Q03482	75 aa		-0.83	□□□□□ -2.54
HMRA2	YCR096C	YPL261C	Q08976	102 aa		-0.83	□□□□□ -2.54
HMRA2	YCR096C	YLR363W-A	Q3E747	85 aa		-0.83	□□□□□ -2.54
HMRA2	YCR096C	YFR009W-A	P0C5M9	85 aa		-0.84	□□□□□ -2.54
HMRA2	YCR096C	PAU2	P32612	120 aa		-0.84	□□□□□ -2.54
HMRA2	YCR096C	ATX1	P38636	73 aa		-0.84	□□□□□ -2.54
HMRA2	YCR096C	SGF11	Q03067	99 aa		-0.84	□□□□□ -2.54
HMRA2	YCR096C	CYC2	P38909	366 aa		-0.85	□□□□□ -2.55
HMRA2	YCR096C	YNL198C	P40166	100 aa		-0.85	□□□□□ -2.55
HMRA2	YCR096C	RPL22B	P56628	122 aa	Known RBP	-0.85	□□□□□ -2.55
HMRA2	YCR096C	YCL048W-A	Q2V2Q2	79 aa		-0.85	□□□□□ -2.55
HMRA2	YCR096C	Q0144	Q9ZZW2	109 aa		-0.85	□□□□□ -2.55
HMRA2	YCR096C	RAD50	P12753	1312 aa		-0.86	□□□□□ -2.55
HMRA2	YCR096C	RUB1	Q03919	77 aa		-0.86	□□□□□ -2.55
HMRA2	YCR096C	CSN9	Q03981	162 aa		-0.86	□□□□□ -2.55
HMRA2	YCR096C	RPS20	P38701	121 aa	Known RBP	-0.87	□□□□□ -2.55
HMRA2	YCR096C	MPC2	P38857	129 aa		-0.87	□□□□□ -2.55
HMRA2	YCR096C	YER187W	P40102	141 aa		-0.87	□□□□□ -2.55
HMRA2	YCR096C	SNN1	P48232	102 aa		-0.87	□□□□□ -2.55
HMRA2	YCR096C	TLG1	Q03322	224 aa		-0.87	□□□□□ -2.55
HMRA2	YCR096C	COX19	Q3E731	98 aa		-0.87	□□□□□ -2.55
HMRA2	YCR096C	SEN1	Q00416	2231 aa	Known RBP	-0.88	□□□□□ -2.55
HMRA2	YCR096C	GIM4	P40005	111 aa	Known RBP	-0.88	□□□□□ -2.55
HMRA2	YCR096C	IMP2	P46972	177 aa		-0.88	□□□□□ -2.55
HMRA2	YCR096C	UTP20	P35194	2493 aa	Known RBP	-0.89	□□□□□ -2.55
HMRA2	YCR096C	RPC10	P40422	70 aa		-0.89	□□□□□ -2.55
HMRA2	YCR096C	TIM8	P57744	87 aa		-0.89	□□□□□ -2.55
HMRA2	YCR096C	SAE3	P89114	91 aa		-0.89	□□□□□ -2.55
HMRA2	YCR096C	TY1B-LR3	P0C2I6	1755 aa	Known RBP	-0.9	□□□□□ -2.55
HMRA2	YCR096C	TY1B-PR3	P0C2J1	1755 aa	Known RBP	-0.9	□□□□□ -2.55
HMRA2	YCR096C	YBR056W-A	I2HB52	66 aa		-0.9	□□□□□ -2.55
HMRA2	YCR096C	YGR164W	P53291	111 aa		-0.9	□□□□□ -2.55
HMRA2	YCR096C	FRQ1	Q06389	190 aa		-0.9	□□□□□ -2.55
HMRA2	YCR096C	LSM6	Q06406	86 aa	Known RBP	-0.9	□□□□□ -2.55
HMRA2	YCR096C	CAT8	P39113	1433 aa		-0.9	□□□□□ -2.55
HMRA2	YCR096C	RSF2	P46974	1380 aa		-0.91	□□□□□ -2.55
HMRA2	YCR096C	TDA2	P40045	126 aa		-0.91	□□□□□ -2.56
HMRA2	YCR096C	SPC24	Q04477	213 aa		-0.91	□□□□□ -2.56
HMRA2	YCR096C	YDR278C	Q05612	105 aa		-0.91	□□□□□ -2.56
HMRA2	YCR096C	MYO2	P19524	1574 aa	Known RBP	-0.91	□□□□□ -2.56
HMRA2	YCR096C	PAU19	P0CE85	124 aa		-0.92	□□□□□ -2.56
HMRA2	YCR096C	YCR101C	P25607	182 aa		-0.92	□□□□□ -2.56
HMRA2	YCR096C	PAU3	P25610	124 aa		-0.92	□□□□□ -2.56

Retrieved 100 of 5,963 RNA–protein pairs in 62.2 ms