RNA–Protein interactions for RNA: YAL021C

CCR4, Transcript of Component of the CCR4-NOT transcriptional complex, yeastyeast

Gene CCR4, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCR4YAL021C RPL16AP26784 199 aaKnown RBP5.95□□□□□ -1.46
CCR4YAL021C MED6P38782 295 aa5.95□□□□□ -1.46
CCR4YAL021C YGL118CP53132 145 aa5.95□□□□□ -1.46
CCR4YAL021C NPC2Q12408 173 aa5.95□□□□□ -1.46
CCR4YAL021C YOR268CQ08734 132 aa5.95□□□□□ -1.46
CCR4YAL021C EMC6Q12431 108 aa5.95□□□□□ -1.46
CCR4YAL021C COX9P07255 59 aa5.94□□□□□ -1.46
CCR4YAL021C MRPL31P14063 131 aaPredicted RBP5.94□□□□□ -1.46
CCR4YAL021C SPT4P32914 102 aaPredicted RBP5.94□□□□□ -1.46
CCR4YAL021C YER181CP40097 107 aa5.94□□□□□ -1.46
CCR4YAL021C CDC1P40986 491 aa5.94□□□□□ -1.46
CCR4YAL021C YDL007C-AQ2V2Q0 85 aa5.94□□□□□ -1.46
CCR4YAL021C CRH1P53301 507 aa5.94□□□□□ -1.46
CCR4YAL021C HAL1Q01766 294 aa5.94□□□□□ -1.46
CCR4YAL021C LSM6Q06406 86 aaKnown RBP5.94□□□□□ -1.46
CCR4YAL021C PIS1P06197 220 aaKnown RBP5.93□□□□□ -1.46
CCR4YAL021C FPR2P32472 135 aa5.93□□□□□ -1.46
CCR4YAL021C TIM12P32830 109 aa5.93□□□□□ -1.46
CCR4YAL021C YOL160WQ08321 113 aa5.93□□□□□ -1.46
CCR4YAL021C SMT3Q12306 101 aaKnown RBP5.93□□□□□ -1.46
CCR4YAL021C Q0255P03881 472 aa5.92□□□□□ -1.46
CCR4YAL021C SWD3P38123 315 aa5.92□□□□□ -1.46
CCR4YAL021C DSE2P38844 325 aa5.92□□□□□ -1.46
CCR4YAL021C TDA8Q6B2U8 126 aa5.92□□□□□ -1.46
CCR4YAL021C YHR213WP0CI67 198 aa5.91□□□□□ -1.46
CCR4YAL021C IMP1P28627 190 aa5.91□□□□□ -1.46
CCR4YAL021C PEX17P40155 199 aa5.91□□□□□ -1.46
CCR4YAL021C YIL163CP40448 117 aa5.91□□□□□ -1.46
CCR4YAL021C RSM19P53733 91 aaPredicted RBP5.91□□□□□ -1.46
CCR4YAL021C YBR255C-AQ3E776 120 aa5.91□□□□□ -1.46
CCR4YAL021C YNL217WP40152 326 aa5.91□□□□□ -1.46
CCR4YAL021C YLR112WQ12130 139 aa5.91□□□□□ -1.46
CCR4YAL021C YDL009CQ12210 107 aa5.91□□□□□ -1.46
CCR4YAL021C NCE102Q12207 173 aaRIP-Chip data5.9□□□□□ -1.46not detected
CCR4YAL021C NRM1P53718 249 aa5.9□□□□□ -1.47
CCR4YAL021C YOR186WQ08560 144 aa5.9□□□□□ -1.47
CCR4YAL021C FLO1P32768 1537 aa5.9□□□□□ -1.47
CCR4YAL021C RPL42AP0CX27 106 aaKnown RBP5.89□□□□□ -1.47
CCR4YAL021C RPL42BP0CX28 106 aaKnown RBP5.89□□□□□ -1.47
CCR4YAL021C YER187WP40102 141 aa5.89□□□□□ -1.47
CCR4YAL021C KEG1P43614 200 aa5.89□□□□□ -1.47
CCR4YAL021C RNH203Q12338 110 aa5.89□□□□□ -1.47
CCR4YAL021C RPS22AP0C0W1 130 aaKnown RBP5.88□□□□□ -1.47
CCR4YAL021C YKL044WP36092 106 aa5.88□□□□□ -1.47
CCR4YAL021C RPL16BP26785 198 aaKnown RBP5.88□□□□□ -1.47
CCR4YAL021C YFR035CP43608 114 aa5.88□□□□□ -1.47
CCR4YAL021C PGU1P47180 361 aa5.87□□□□□ -1.47
CCR4YAL021C USV1Q12132 391 aa5.87□□□□□ -1.47
CCR4YAL021C RPL11BQ3E757 174 aaPredicted RBP5.87□□□□□ -1.47
CCR4YAL021C YPL261CQ08976 102 aa5.87□□□□□ -1.47
CCR4YAL021C TSC3Q3E790 80 aa5.87□□□□□ -1.47
CCR4YAL021C SPS100P13130 326 aa5.86□□□□□ -1.47
CCR4YAL021C PIR1Q03178 341 aa5.86□□□□□ -1.47
CCR4YAL021C MIX14Q04341 121 aa5.86□□□□□ -1.47
CCR4YAL021C FUN19P28003 413 aaPredicted RBP5.86□□□□□ -1.47
CCR4YAL021C YEL067CP39978 195 aa5.86□□□□□ -1.47
CCR4YAL021C ICY1Q04329 127 aa5.86□□□□□ -1.47
CCR4YAL021C LST8P41318 303 aa5.85□□□□□ -1.47
CCR4YAL021C YDL211CQ12121 372 aa5.85□□□□□ -1.47
CCR4YAL021C JJJ3P47138 172 aa5.85□□□□□ -1.47
CCR4YAL021C SWS2P53937 143 aa5.85□□□□□ -1.47
CCR4YAL021C YDR102CQ03864 110 aa5.85□□□□□ -1.47
CCR4YAL021C YHR214C-EQ8TGK0 99 aa5.85□□□□□ -1.47
CCR4YAL021C RPL23AP0CX41 137 aaKnown RBP5.84□□□□□ -1.47
CCR4YAL021C RPL23BP0CX42 137 aaKnown RBP5.84□□□□□ -1.47
CCR4YAL021C SLG1P54867 378 aa5.84□□□□□ -1.47
CCR4YAL021C RPS14AP06367 137 aaKnown RBP5.84□□□□□ -1.47
CCR4YAL021C RPB9P27999 122 aa5.84□□□□□ -1.47
CCR4YAL021C HTL1Q9URQ5 78 aa5.84□□□□□ -1.47
CCR4YAL021C RPL15AP05748 204 aaKnown RBP5.83□□□□□ -1.48
CCR4YAL021C YKR045CP36138 183 aa5.83□□□□□ -1.48
CCR4YAL021C ICS3P47034 131 aa5.83□□□□□ -1.48
CCR4YAL021C RPL15BP54780 204 aaPredicted RBP5.83□□□□□ -1.48
CCR4YAL021C IRC23Q08416 157 aa5.83□□□□□ -1.48
CCR4YAL021C YLR365WQ7LIF2 110 aa5.83□□□□□ -1.48
CCR4YAL021C ROX3P25046 220 aa5.83□□□□□ -1.48
CCR4YAL021C CSE2P33308 149 aa5.83□□□□□ -1.48
CCR4YAL021C SIM1P40472 476 aa5.83□□□□□ -1.48
CCR4YAL021C YIA6P40556 373 aa5.83□□□□□ -1.48
CCR4YAL021C YMR007WQ03675 126 aa5.83□□□□□ -1.48
CCR4YAL021C YBR209WP38311 105 aa5.82□□□□□ -1.48
CCR4YAL021C UBC13P52490 153 aa5.82□□□□□ -1.48
CCR4YAL021C YPR096CO13587 100 aa5.82□□□□□ -1.48
CCR4YAL021C YEL045CP32616 141 aa5.82□□□□□ -1.48
CCR4YAL021C APS1P35181 156 aa5.82□□□□□ -1.48
CCR4YAL021C YGL193CP53097 103 aa5.81□□□□□ -1.48
CCR4YAL021C LEE1Q02799 301 aaKnown RBP5.81□□□□□ -1.48
CCR4YAL021C YDR246W-AQ3E763 66 aa5.81□□□□□ -1.48
CCR4YAL021C HSP12P22943 109 aaKnown RBP5.81□□□□□ -1.48
CCR4YAL021C YSY6P38374 65 aa5.81□□□□□ -1.48
CCR4YAL021C YNR077CP53758 84 aa5.81□□□□□ -1.48
CCR4YAL021C YDR274CP87283 123 aa5.81□□□□□ -1.48
CCR4YAL021C RPL11AP0C0W9 174 aaKnown RBP5.8□□□□□ -1.48
CCR4YAL021C ERG2P32352 222 aa5.8□□□□□ -1.48
CCR4YAL021C YGR269WP40326 108 aa5.8□□□□□ -1.48
CCR4YAL021C YMR181CQ03231 154 aa5.8□□□□□ -1.48
CCR4YAL021C MZM1Q03429 123 aaPredicted RBP5.8□□□□□ -1.48
CCR4YAL021C YMR295CQ03559 197 aa5.8□□□□□ -1.48
CCR4YAL021C YOR192C-CQ3E736 78 aa5.8□□□□□ -1.48
CCR4YAL021C YML100W-AQ8TGT0 57 aa5.8□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 25.6 ms