RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 APBB1IPQ7Z5R6 666 aaPredicted RBP17.34■□□□□ 0.37
HNRNPU-228ENST00000640306 PPIL6Q8IXY8 311 aa17.34■□□□□ 0.37
HNRNPU-228ENST00000640306 STK32AQ8WU08 396 aa17.34■□□□□ 0.37
HNRNPU-228ENST00000640306 ZBTB10Q96DT7 871 aa17.34■□□□□ 0.37
HNRNPU-228ENST00000640306 RAB6CQ9H0N0 254 aa17.34■□□□□ 0.37
HNRNPU-228ENST00000640306 FARP1Q9Y4F1 1045 aaPredicted RBP17.34■□□□□ 0.37
HNRNPU-228ENST00000640306 C3orf70A6NLC5 250 aaPredicted RBP17.34■□□□□ 0.37
HNRNPU-228ENST00000640306 FAM155BO75949 473 aa17.34■□□□□ 0.37
HNRNPU-228ENST00000640306 NFASCO94856 1347 aa17.34■□□□□ 0.37
HNRNPU-228ENST00000640306 LDHAP00338 332 aaKnown RBP17.34■□□□□ 0.37
HNRNPU-228ENST00000640306 PCK1P35558 622 aa17.34■□□□□ 0.37
HNRNPU-228ENST00000640306 PSMC1P62191 440 aaKnown RBP17.34■□□□□ 0.37
HNRNPU-228ENST00000640306 ZBTB16Q05516 673 aa17.34■□□□□ 0.37
HNRNPU-228ENST00000640306 PIGHQ14442 188 aaPredicted RBP17.34■□□□□ 0.37
HNRNPU-228ENST00000640306 PARP6Q2NL67 630 aa17.34■□□□□ 0.37
HNRNPU-228ENST00000640306 CIAPIN1Q6FI81 312 aa17.34■□□□□ 0.37
HNRNPU-228ENST00000640306 TTC7BQ86TV6 843 aa17.34■□□□□ 0.37
HNRNPU-228ENST00000640306 LRRC71Q8N4P6 559 aa17.34■□□□□ 0.37
HNRNPU-228ENST00000640306 DHX33Q9H6R0 707 aaKnown RBP17.34■□□□□ 0.37
HNRNPU-228ENST00000640306 METTL5Q9NRN9 209 aaKnown RBP17.34■□□□□ 0.37
HNRNPU-228ENST00000640306 ARL8BQ9NVJ2 186 aa17.34■□□□□ 0.37
HNRNPU-228ENST00000640306 ZNF214Q9UL59 606 aaPredicted RBP17.34■□□□□ 0.37
HNRNPU-228ENST00000640306 CNTN6Q9UQ52 1028 aa17.34■□□□□ 0.37
HNRNPU-228ENST00000640306 GJA3Q9Y6H8 435 aa17.34■□□□□ 0.37
HNRNPU-228ENST00000640306 GJB1P08034 283 aa17.34■□□□□ 0.37
HNRNPU-228ENST00000640306 TROVE2P10155 538 aaKnown RBP eCLIP17.34■□□□□ 0.376e-9■□□□□ 10.6
HNRNPU-228ENST00000640306 MAP3K10Q02779 954 aa17.34■□□□□ 0.37
HNRNPU-228ENST00000640306 PRKG1Q13976 671 aa17.34■□□□□ 0.37
HNRNPU-228ENST00000640306 FAXCQ5TGI0 409 aa17.34■□□□□ 0.37
HNRNPU-228ENST00000640306 DSTYKQ6XUX3 929 aa17.34■□□□□ 0.37
HNRNPU-228ENST00000640306 KCTD6Q8NC69 237 aa17.34■□□□□ 0.37
HNRNPU-228ENST00000640306 MANSC1Q9H8J5 431 aa17.34■□□□□ 0.37
HNRNPU-228ENST00000640306 ADGRA2Q96PE1 1338 aa17.33■□□□□ 0.37
HNRNPU-228ENST00000640306 ATP5HO75947 161 aa17.33■□□□□ 0.37
HNRNPU-228ENST00000640306 BGNP21810 368 aa17.33■□□□□ 0.37
HNRNPU-228ENST00000640306 SERPINB3P29508 390 aa17.33■□□□□ 0.37
HNRNPU-228ENST00000640306 PHBP35232 272 aa17.33■□□□□ 0.37
HNRNPU-228ENST00000640306 ELK3P41970 407 aa17.33■□□□□ 0.37
HNRNPU-228ENST00000640306 CPA2P48052 419 aa17.33■□□□□ 0.37
HNRNPU-228ENST00000640306 YWHAGP61981 247 aaKnown RBP eCLIP17.33■□□□□ 0.371e-6■■■□□ 17.8
HNRNPU-228ENST00000640306 ZNF699Q32M78 642 aa17.33■□□□□ 0.37
HNRNPU-228ENST00000640306 GNPTABQ3T906 1256 aa17.33■□□□□ 0.37
HNRNPU-228ENST00000640306 NAT8LQ8N9F0 302 aa17.33■□□□□ 0.37
HNRNPU-228ENST00000640306 PRPF31Q8WWY3 499 aaKnown RBP17.33■□□□□ 0.37
HNRNPU-228ENST00000640306 SERAC1Q96JX3 654 aa17.33■□□□□ 0.37
HNRNPU-228ENST00000640306 NIF3L1Q9GZT8 377 aa17.33■□□□□ 0.37
HNRNPU-228ENST00000640306 ARMCX1Q9P291 453 aa17.33■□□□□ 0.37
HNRNPU-228ENST00000640306 SNCAIPQ9Y6H5 919 aa17.33■□□□□ 0.37
HNRNPU-228ENST00000640306 MAFGO15525 162 aa17.33■□□□□ 0.36
HNRNPU-228ENST00000640306 LPXNO60711 386 aa17.33■□□□□ 0.36
HNRNPU-228ENST00000640306 ZWINTO95229 277 aa17.33■□□□□ 0.36
HNRNPU-228ENST00000640306 MT-ND3P03897 115 aa17.33■□□□□ 0.36
HNRNPU-228ENST00000640306 GNAZP19086 355 aa17.33■□□□□ 0.36
HNRNPU-228ENST00000640306 GCKP35557 465 aa17.33■□□□□ 0.36
HNRNPU-228ENST00000640306 ARL2P36404 184 aa17.33■□□□□ 0.36
HNRNPU-228ENST00000640306 EIF3EP60228 445 aaKnown RBP17.33■□□□□ 0.36
HNRNPU-228ENST00000640306 CCDC142Q17RM4 750 aa17.33■□□□□ 0.36
HNRNPU-228ENST00000640306 TMEM132AQ24JP5 1023 aa17.33■□□□□ 0.36
HNRNPU-228ENST00000640306 KHDC1Q4VXA5 237 aaKnown RBP17.33■□□□□ 0.36
HNRNPU-228ENST00000640306 PPP1R15BQ5SWA1 713 aa17.33■□□□□ 0.36
HNRNPU-228ENST00000640306 SH3PXD2AQ5TCZ1 1133 aa17.33■□□□□ 0.36
HNRNPU-228ENST00000640306 RGS9BPQ6ZS82 235 aa17.33■□□□□ 0.36
HNRNPU-228ENST00000640306 DCAKDQ8WVC6 231 aa17.33■□□□□ 0.36
HNRNPU-228ENST00000640306 WDR81Q562E7 1941 aa17.33■□□□□ 0.36
HNRNPU-228ENST00000640306 SPATA31C2B4DYI2 1134 aa17.32■□□□□ 0.36
HNRNPU-228ENST00000640306 RBP3P10745 1247 aa17.32■□□□□ 0.36
HNRNPU-228ENST00000640306 PTDSS1P48651 473 aaKnown RBP17.32■□□□□ 0.36
HNRNPU-228ENST00000640306 BACE1P56817 501 aa17.32■□□□□ 0.36
HNRNPU-228ENST00000640306 SLC25A11Q02978 314 aaKnown RBP17.32■□□□□ 0.36
HNRNPU-228ENST00000640306 FAAP100Q0VG06 881 aa17.32■□□□□ 0.36
HNRNPU-228ENST00000640306 KBTBD12Q3ZCT8 623 aa17.32■□□□□ 0.36
HNRNPU-228ENST00000640306 MDH1BQ5I0G3 518 aa17.32■□□□□ 0.36
HNRNPU-228ENST00000640306 LRRC38Q5VT99 294 aa17.32■□□□□ 0.36
HNRNPU-228ENST00000640306 CAPRIN2Q6IMN6 1127 aaKnown RBP17.32■□□□□ 0.36
HNRNPU-228ENST00000640306 PDIK1LQ8N165 341 aa17.32■□□□□ 0.36
HNRNPU-228ENST00000640306 DTX3LQ8TDB6 740 aa17.32■□□□□ 0.36
HNRNPU-228ENST00000640306 CPXM1Q96SM3 734 aa17.32■□□□□ 0.36
HNRNPU-228ENST00000640306 TSSK1BQ9BXA7 367 aa17.32■□□□□ 0.36
HNRNPU-228ENST00000640306 OSBPL1AQ9BXW6 950 aa17.32■□□□□ 0.36
HNRNPU-228ENST00000640306 CYLDQ9NQC7 956 aa17.32■□□□□ 0.36
HNRNPU-228ENST00000640306 DDX56Q9NY93 547 aaKnown RBP17.32■□□□□ 0.36
HNRNPU-228ENST00000640306 C2CD2LO14523 706 aa17.32■□□□□ 0.36
HNRNPU-228ENST00000640306 PYGBP11216 843 aa17.32■□□□□ 0.36
HNRNPU-228ENST00000640306 KDELR1P24390 212 aa17.32■□□□□ 0.36
HNRNPU-228ENST00000640306 PTK7Q13308 1070 aa17.32■□□□□ 0.36
HNRNPU-228ENST00000640306 CDO1Q16878 200 aa17.32■□□□□ 0.36
HNRNPU-228ENST00000640306 ADGRD1Q6QNK2 874 aa17.32■□□□□ 0.36
HNRNPU-228ENST00000640306 TRIM50Q86XT4 487 aa17.32■□□□□ 0.36
HNRNPU-228ENST00000640306 BRSK2Q8IWQ3 736 aa17.32■□□□□ 0.36
HNRNPU-228ENST00000640306 CTAGE3PQ8IX95 158 aa17.32■□□□□ 0.36
HNRNPU-228ENST00000640306 INPP5DQ92835 1189 aa17.32■□□□□ 0.36
HNRNPU-228ENST00000640306 CFAP36Q96G28 342 aa17.32■□□□□ 0.36
HNRNPU-228ENST00000640306 WRNIP1Q96S55 665 aa17.32■□□□□ 0.36
HNRNPU-228ENST00000640306 CADM1Q9BY67 442 aaKnown RBP17.32■□□□□ 0.36
HNRNPU-228ENST00000640306 ACSS3Q9H6R3 686 aa17.32■□□□□ 0.36
HNRNPU-228ENST00000640306 KBTBD13C9JR72 458 aa17.31■□□□□ 0.36
HNRNPU-228ENST00000640306 CSDE1O75534 798 aaKnown RBP17.31■□□□□ 0.36
HNRNPU-228ENST00000640306 GRAP2O75791 330 aa17.31■□□□□ 0.36
HNRNPU-228ENST00000640306 PTPN4P29074 926 aa17.31■□□□□ 0.36
HNRNPU-228ENST00000640306 SLC45A4Q5BKX6 768 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms