RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 TFDP3Q5H9I0 405 aa19.19■□□□□ 0.66
SCARB2-213ENST00000638680 KBTBD4Q9NVX7 518 aa19.19■□□□□ 0.66
SCARB2-213ENST00000638680 MAP3K20Q9NYL2 800 aaKnown RBP19.19■□□□□ 0.66
SCARB2-213ENST00000638680 RPS6KL1Q9Y6S9 549 aa19.19■□□□□ 0.66
SCARB2-213ENST00000638680 CCDC142Q17RM4 750 aa19.19■□□□□ 0.66
SCARB2-213ENST00000638680 EFHC1Q5JVL4 640 aa19.19■□□□□ 0.66
SCARB2-213ENST00000638680 CCDC103Q8IW40 242 aa19.19■□□□□ 0.66
SCARB2-213ENST00000638680 DDX50Q9BQ39 737 aaKnown RBP19.19■□□□□ 0.66
SCARB2-213ENST00000638680 ZBED2Q9BTP6 218 aa19.19■□□□□ 0.66
SCARB2-213ENST00000638680 EFCAB1Q9HAE3 211 aa19.19■□□□□ 0.66
SCARB2-213ENST00000638680 RUVBL2Q9Y230 463 aaKnown RBP19.19■□□□□ 0.66
SCARB2-213ENST00000638680 DPYSL4O14531 572 aa19.18■□□□□ 0.66
SCARB2-213ENST00000638680 H2AFYO75367 372 aaKnown RBP19.18■□□□□ 0.66
SCARB2-213ENST00000638680 SASH3O75995 380 aa19.18■□□□□ 0.66
SCARB2-213ENST00000638680 NAIF1Q69YI7 327 aaPredicted RBP19.18■□□□□ 0.66
SCARB2-213ENST00000638680 PLEKHM3Q6ZWE6 761 aa19.18■□□□□ 0.66
SCARB2-213ENST00000638680 BBS2Q9BXC9 721 aa19.18■□□□□ 0.66
SCARB2-213ENST00000638680 A0A0A6YYK5 440 aaPredicted RBP19.18■□□□□ 0.66
SCARB2-213ENST00000638680 TMEM62Q0P6H9 643 aa19.18■□□□□ 0.66
SCARB2-213ENST00000638680 PTRHD1Q6GMV3 140 aaKnown RBP19.18■□□□□ 0.66
SCARB2-213ENST00000638680 EFL1Q7Z2Z2 1120 aaKnown RBP19.18■□□□□ 0.66
SCARB2-213ENST00000638680 HES6Q96HZ4 224 aa19.18■□□□□ 0.66
SCARB2-213ENST00000638680 HPDLQ96IR7 371 aa19.18■□□□□ 0.66
SCARB2-213ENST00000638680 TEX13BQ9BXU2 312 aa19.18■□□□□ 0.66
SCARB2-213ENST00000638680 HPS4Q9NQG7 708 aa19.18■□□□□ 0.66
SCARB2-213ENST00000638680 OVOS2A0A0G2JMS6 1433 aa19.18■□□□□ 0.66
SCARB2-213ENST00000638680 OVOS2A0A0J9YW53 1432 aa19.18■□□□□ 0.66
SCARB2-213ENST00000638680 OVOS2Q6IE36 1432 aa19.18■□□□□ 0.66
SCARB2-213ENST00000638680 ZNF23P17027 643 aa19.18■□□□□ 0.66
SCARB2-213ENST00000638680 PSMD7P51665 324 aa19.18■□□□□ 0.66
SCARB2-213ENST00000638680 OTUD4Q01804 1114 aaKnown RBP19.18■□□□□ 0.66
SCARB2-213ENST00000638680 BOLA3Q53S33 107 aa19.18■□□□□ 0.66
SCARB2-213ENST00000638680 LPAR1Q92633 364 aa19.18■□□□□ 0.66
SCARB2-213ENST00000638680 SERPINB8P50452 374 aa19.18■□□□□ 0.66
SCARB2-213ENST00000638680 OASLQ15646 514 aaKnown RBP19.18■□□□□ 0.66
SCARB2-213ENST00000638680 ADRM1Q16186 407 aa19.18■□□□□ 0.66
SCARB2-213ENST00000638680 POU4F1Q01851 419 aa19.17■□□□□ 0.66
SCARB2-213ENST00000638680 CCDC33Q8N5R6 958 aa19.17■□□□□ 0.66
SCARB2-213ENST00000638680 TMEM121Q9BTD3 319 aa19.17■□□□□ 0.66
SCARB2-213ENST00000638680 KCTD10Q9H3F6 313 aa19.17■□□□□ 0.66
SCARB2-213ENST00000638680 SEMA4AQ9H3S1 761 aa19.17■□□□□ 0.66
SCARB2-213ENST00000638680 ANKEF1Q9NU02 776 aa19.17■□□□□ 0.66
SCARB2-213ENST00000638680 GEMIN8Q9NWZ8 242 aaKnown RBP19.17■□□□□ 0.66
SCARB2-213ENST00000638680 KDM6AO15550 1401 aaPredicted RBP19.17■□□□□ 0.66
SCARB2-213ENST00000638680 TNPO2O14787 897 aaKnown RBP19.17■□□□□ 0.66
SCARB2-213ENST00000638680 CD4P01730 458 aa19.17■□□□□ 0.66
SCARB2-213ENST00000638680 ORC1Q13415 861 aa19.17■□□□□ 0.66
SCARB2-213ENST00000638680 FOXR1Q6PIV2 292 aa19.17■□□□□ 0.66
SCARB2-213ENST00000638680 ELMSAN1Q6PJG2 1045 aa19.17■□□□□ 0.66
SCARB2-213ENST00000638680 RAB21Q9UL25 225 aa19.17■□□□□ 0.66
SCARB2-213ENST00000638680 CAB39Q9Y376 341 aaPredicted RBP19.17■□□□□ 0.66
SCARB2-213ENST00000638680 MYO3AQ8NEV4 1616 aa19.17■□□□□ 0.66
SCARB2-213ENST00000638680 TNS3Q68CZ2 1445 aa19.17■□□□□ 0.66
SCARB2-213ENST00000638680 ZSCAN5CA6NGD5 496 aaPredicted RBP19.17■□□□□ 0.66
SCARB2-213ENST00000638680 ITGB3P05106 788 aa19.17■□□□□ 0.66
SCARB2-213ENST00000638680 CHRM3P20309 590 aa19.17■□□□□ 0.66
SCARB2-213ENST00000638680 SEZ6Q53EL9 994 aa19.17■□□□□ 0.66
SCARB2-213ENST00000638680 CBWD2Q8IUF1 395 aa19.17■□□□□ 0.66
SCARB2-213ENST00000638680 SLC20A1Q8WUM9 679 aa19.17■□□□□ 0.66
SCARB2-213ENST00000638680 CENPPQ6IPU0 288 aa19.17■□□□□ 0.66
SCARB2-213ENST00000638680 LINC00523Q86TU6 105 aa19.17■□□□□ 0.66
SCARB2-213ENST00000638680 BRD8Q9H0E9 1235 aa19.17■□□□□ 0.66
SCARB2-213ENST00000638680 APPL1Q9UKG1 709 aa19.17■□□□□ 0.66
SCARB2-213ENST00000638680 MTSS1O43312 755 aa19.17■□□□□ 0.66
SCARB2-213ENST00000638680 STRNO43815 780 aa19.17■□□□□ 0.66
SCARB2-213ENST00000638680 NCAM1P13591 858 aa19.17■□□□□ 0.66
SCARB2-213ENST00000638680 DENND1BQ6P3S1 775 aa19.17■□□□□ 0.66
SCARB2-213ENST00000638680 RIPK2O43353 540 aa19.16■□□□□ 0.66
SCARB2-213ENST00000638680 SUPT7LO94864 414 aa19.16■□□□□ 0.66
SCARB2-213ENST00000638680 CLPTM1O96005 669 aa19.16■□□□□ 0.66
SCARB2-213ENST00000638680 NME5P56597 212 aa19.16■□□□□ 0.66
SCARB2-213ENST00000638680 VEPH1Q14D04 833 aa19.16■□□□□ 0.66
SCARB2-213ENST00000638680 PLEKHA8Q96JA3 519 aa19.16■□□□□ 0.66
SCARB2-213ENST00000638680 AGBL1Q96MI9 1066 aa19.16■□□□□ 0.66
SCARB2-213ENST00000638680 THUMPD3Q9BV44 507 aaKnown RBP19.16■□□□□ 0.66
SCARB2-213ENST00000638680 MUC3BQ9H195 1237 aa19.16■□□□□ 0.66
SCARB2-213ENST00000638680 TRPC7Q9HCX4 862 aa19.16■□□□□ 0.66
SCARB2-213ENST00000638680 NAALADL1Q9UQQ1 740 aa19.16■□□□□ 0.66
SCARB2-213ENST00000638680 CDC42BPAQ5VT25 1732 aa19.16■□□□□ 0.66
SCARB2-213ENST00000638680 CYTH3O43739 400 aa19.16■□□□□ 0.66
SCARB2-213ENST00000638680 FAM153BP0C7A2 387 aa19.16■□□□□ 0.66
SCARB2-213ENST00000638680 RXRBP28702 533 aa19.16■□□□□ 0.66
SCARB2-213ENST00000638680 PLIN5Q00G26 463 aa19.16■□□□□ 0.66
SCARB2-213ENST00000638680 GIT2Q14161 759 aa19.16■□□□□ 0.66
SCARB2-213ENST00000638680 FAM153CQ494X1 144 aa19.16■□□□□ 0.66
SCARB2-213ENST00000638680 SV2CQ496J9 727 aa19.16■□□□□ 0.66
SCARB2-213ENST00000638680 ZRANB3Q5FWF4 1079 aa19.16■□□□□ 0.66
SCARB2-213ENST00000638680 PACS2Q86VP3 889 aa19.16■□□□□ 0.66
SCARB2-213ENST00000638680 PHF21AQ96BD5 680 aa19.16■□□□□ 0.66
SCARB2-213ENST00000638680 EVPLLA8MZ36 301 aa19.16■□□□□ 0.66
SCARB2-213ENST00000638680 E9PBE3 544 aa19.16■□□□□ 0.66
SCARB2-213ENST00000638680 LZTS3O60299 673 aaPredicted RBP19.16■□□□□ 0.66
SCARB2-213ENST00000638680 KLHL41O60662 606 aa19.16■□□□□ 0.66
SCARB2-213ENST00000638680 WBP4O75554 376 aaKnown RBP19.16■□□□□ 0.66
SCARB2-213ENST00000638680 RGS4P49798 205 aa19.16■□□□□ 0.66
SCARB2-213ENST00000638680 FBXO33Q7Z6M2 555 aa19.16■□□□□ 0.66
SCARB2-213ENST00000638680 HDAC7Q8WUI4 952 aa19.16■□□□□ 0.66
SCARB2-213ENST00000638680 TUBGCP3Q96CW5 907 aa19.16■□□□□ 0.66
SCARB2-213ENST00000638680 CACNA2D1P54289 1103 aa19.16■□□□□ 0.66
SCARB2-213ENST00000638680 AGAP9Q5VTM2 703 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms