RNA–Protein interactions for RNA: ENST00000637537.1

CLN5-219, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 4

Gene CLN5, Length 2,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-219ENST00000637537 SATB1Q01826 763 aa19.71■□□□□ 0.75
CLN5-219ENST00000637537 KRT17Q04695 432 aa19.71■□□□□ 0.75
CLN5-219ENST00000637537 NFX1Q12986 1120 aaKnown RBP19.71■□□□□ 0.75
CLN5-219ENST00000637537 CNGA2Q16280 664 aa19.71■□□□□ 0.75
CLN5-219ENST00000637537 PPP1R26Q5T8A7 1209 aaPredicted RBP19.71■□□□□ 0.75
CLN5-219ENST00000637537 EXD1Q8NHP7 514 aa19.71■□□□□ 0.75
CLN5-219ENST00000637537 WNT8BQ93098 351 aa19.71■□□□□ 0.75
CLN5-219ENST00000637537 CCDC114Q96M63 670 aa19.71■□□□□ 0.75
CLN5-219ENST00000637537 DCLK3Q9C098 648 aa19.71■□□□□ 0.75
CLN5-219ENST00000637537 CNTN3Q9P232 1028 aa19.71■□□□□ 0.75
CLN5-219ENST00000637537 SIGLEC16A6NMB1 481 aa19.7■□□□□ 0.74
CLN5-219ENST00000637537 DUSP11O75319 330 aaKnown RBP19.7■□□□□ 0.74
CLN5-219ENST00000637537 CTSHP09668 335 aa19.7■□□□□ 0.74
CLN5-219ENST00000637537 RGS7P49802 495 aa19.7■□□□□ 0.74
CLN5-219ENST00000637537 SOX4Q06945 474 aaPredicted RBP19.7■□□□□ 0.74
CLN5-219ENST00000637537 C9orf57Q5W0N0 161 aa19.7■□□□□ 0.74
CLN5-219ENST00000637537 CYP4F22Q6NT55 531 aa19.7■□□□□ 0.74
CLN5-219ENST00000637537 APBB1IPQ7Z5R6 666 aaPredicted RBP19.7■□□□□ 0.74
CLN5-219ENST00000637537 PRUNE1Q86TP1 453 aa19.7■□□□□ 0.74
CLN5-219ENST00000637537 BEST2Q8NFU1 509 aa19.7■□□□□ 0.74
CLN5-219ENST00000637537 CENPHQ9H3R5 247 aa19.7■□□□□ 0.74
CLN5-219ENST00000637537 ZWILCHQ9H900 591 aa19.7■□□□□ 0.74
CLN5-219ENST00000637537 LRRC4CQ9HCJ2 640 aa19.7■□□□□ 0.74
CLN5-219ENST00000637537 CA12O43570 354 aa19.7■□□□□ 0.74
CLN5-219ENST00000637537 HMGCRP04035 888 aa19.7■□□□□ 0.74
CLN5-219ENST00000637537 VPS41P49754 854 aa19.7■□□□□ 0.74
CLN5-219ENST00000637537 CRYBB1P53674 252 aaPredicted RBP19.7■□□□□ 0.74
CLN5-219ENST00000637537 PIGHQ14442 188 aaPredicted RBP19.7■□□□□ 0.74
CLN5-219ENST00000637537 NBPF20Q3BBV1 942 aa19.7■□□□□ 0.74
CLN5-219ENST00000637537 UBAP2Q5T6F2 1119 aaKnown RBP19.7■□□□□ 0.74
CLN5-219ENST00000637537 ZNF618Q5T7W0 954 aa19.7■□□□□ 0.74
CLN5-219ENST00000637537 ATP6V1G3Q96LB4 118 aa19.7■□□□□ 0.74
CLN5-219ENST00000637537 SLITRK1Q96PX8 696 aa19.7■□□□□ 0.74
CLN5-219ENST00000637537 DPEP3Q9H4B8 488 aa19.7■□□□□ 0.74
CLN5-219ENST00000637537 IPPQ9Y573 584 aa19.7■□□□□ 0.74
CLN5-219ENST00000637537 MEIS3P2A8K0S8 358 aa19.69■□□□□ 0.74
CLN5-219ENST00000637537 SPTLC1O15269 473 aa19.69■□□□□ 0.74
CLN5-219ENST00000637537 GRAP2O75791 330 aa19.69■□□□□ 0.74
CLN5-219ENST00000637537 STAU1O95793 577 aaKnown RBP19.69■□□□□ 0.74
CLN5-219ENST00000637537 CYBAP13498 195 aa19.69■□□□□ 0.74
CLN5-219ENST00000637537 IL1R2P27930 398 aa19.69■□□□□ 0.74
CLN5-219ENST00000637537 SOWAHAQ2M3V2 549 aa19.69■□□□□ 0.74
CLN5-219ENST00000637537 FAM47CQ5HY64 1035 aa19.69■□□□□ 0.74
CLN5-219ENST00000637537 TWF2Q6IBS0 349 aaKnown RBP19.69■□□□□ 0.74
CLN5-219ENST00000637537 OR6B3Q8NGW1 331 aa19.69■□□□□ 0.74
CLN5-219ENST00000637537 HAUS1Q96CS2 278 aa19.69■□□□□ 0.74
CLN5-219ENST00000637537 CACNG4Q9UBN1 327 aa19.69■□□□□ 0.74
CLN5-219ENST00000637537 LRRD1A4D1F6 860 aa19.69■□□□□ 0.74
CLN5-219ENST00000637537 HMGB1P1B2RPK0 211 aaPredicted RBP19.69■□□□□ 0.74
CLN5-219ENST00000637537 E5RJQ4 531 aa19.69■□□□□ 0.74
CLN5-219ENST00000637537 H0YGN5 161 aa19.69■□□□□ 0.74
CLN5-219ENST00000637537 LRCH4O75427 683 aa19.69■□□□□ 0.74
CLN5-219ENST00000637537 PFKMP08237 780 aa19.69■□□□□ 0.74
CLN5-219ENST00000637537 DRG2P55039 364 aaKnown RBP19.69■□□□□ 0.74
CLN5-219ENST00000637537 PPARDQ03181 441 aa19.69■□□□□ 0.74
CLN5-219ENST00000637537 PRKCZQ05513 592 aa19.69■□□□□ 0.74
CLN5-219ENST00000637537 GOLGA7BQ2TAP0 167 aa19.69■□□□□ 0.74
CLN5-219ENST00000637537 FAM228AQ86W67 206 aa19.69■□□□□ 0.74
CLN5-219ENST00000637537 SMG8Q8ND04 991 aaKnown RBP19.69■□□□□ 0.74
CLN5-219ENST00000637537 ZFP42Q96MM3 310 aa19.69■□□□□ 0.74
CLN5-219ENST00000637537 DERAQ9Y315 318 aa19.69■□□□□ 0.74
CLN5-219ENST00000637537 NFS1Q9Y697 457 aa19.69■□□□□ 0.74
CLN5-219ENST00000637537 RALGAPA2Q2PPJ7 1873 aa19.69■□□□□ 0.74
CLN5-219ENST00000637537 PDGFRBP09619 1106 aa19.68■□□□□ 0.74
CLN5-219ENST00000637537 IGFBP6P24592 240 aaPredicted RBP19.68■□□□□ 0.74
CLN5-219ENST00000637537 HOXC8P31273 242 aa19.68■□□□□ 0.74
CLN5-219ENST00000637537 TAP1Q03518 808 aa19.68■□□□□ 0.74
CLN5-219ENST00000637537 SNCBQ16143 134 aa19.68■□□□□ 0.74
CLN5-219ENST00000637537 RAB6CQ53S08 254 aa19.68■□□□□ 0.74
CLN5-219ENST00000637537 FAM102AQ5T9C2 384 aaPredicted RBP19.68■□□□□ 0.74
CLN5-219ENST00000637537 SH3PXD2AQ5TCZ1 1133 aa19.68■□□□□ 0.74
CLN5-219ENST00000637537 GDF6Q6KF10 455 aaPredicted RBP19.68■□□□□ 0.74
CLN5-219ENST00000637537 RAB6CQ9H0N0 254 aa19.68■□□□□ 0.74
CLN5-219ENST00000637537 ASIC3Q9UHC3 531 aa19.68■□□□□ 0.74
CLN5-219ENST00000637537 PCSK1NQ9UHG2 260 aa19.68■□□□□ 0.74
CLN5-219ENST00000637537 DDX20Q9UHI6 824 aaKnown RBP19.68■□□□□ 0.74
CLN5-219ENST00000637537 GNAT1P11488 350 aa19.68■□□□□ 0.74
CLN5-219ENST00000637537 AXLP30530 894 aa19.68■□□□□ 0.74
CLN5-219ENST00000637537 TM4SF4P48230 202 aa19.68■□□□□ 0.74
CLN5-219ENST00000637537 PCBP1Q15365 356 aaKnown RBP eCLIP19.68■□□□□ 0.74
CLN5-219ENST00000637537 ODF2Q5BJF6 829 aa19.68■□□□□ 0.74
CLN5-219ENST00000637537 PARP9Q8IXQ6 854 aa19.68■□□□□ 0.74
CLN5-219ENST00000637537 UBQLN1Q9UMX0 589 aaKnown RBP19.68■□□□□ 0.74
CLN5-219ENST00000637537 TP73O15350 636 aa19.67■□□□□ 0.74
CLN5-219ENST00000637537 LMO2P25791 158 aa19.67■□□□□ 0.74
CLN5-219ENST00000637537 FCGRTP55899 365 aa19.67■□□□□ 0.74
CLN5-219ENST00000637537 TAF5Q15542 800 aa19.67■□□□□ 0.74
CLN5-219ENST00000637537 PMF1Q6P1K2 205 aa19.67■□□□□ 0.74
CLN5-219ENST00000637537 LCLAT1Q6UWP7 414 aa19.67■□□□□ 0.74
CLN5-219ENST00000637537 TTC30AQ86WT1 665 aa19.67■□□□□ 0.74
CLN5-219ENST00000637537 RCOR2Q8IZ40 523 aa19.67■□□□□ 0.74
CLN5-219ENST00000637537 FUKQ8N0W3 1084 aa19.67■□□□□ 0.74
CLN5-219ENST00000637537 NIPA2Q8N8Q9 360 aa19.67■□□□□ 0.74
CLN5-219ENST00000637537 TXLNGYQ9BZA5 131 aa19.67■□□□□ 0.74
CLN5-219ENST00000637537 OSBPL7Q9BZF2 842 aa19.67■□□□□ 0.74
CLN5-219ENST00000637537 PPFIA2O75334 1257 aa19.67■□□□□ 0.74
CLN5-219ENST00000637537 ZNF844Q08AG5 666 aa19.67■□□□□ 0.74
CLN5-219ENST00000637537 ZNF268Q14587 947 aaPredicted RBP19.67■□□□□ 0.74
CLN5-219ENST00000637537 FBXO47Q5MNV8 452 aa19.67■□□□□ 0.74
CLN5-219ENST00000637537 CYB5D1Q6P9G0 228 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms