RNA–Protein interactions for RNA: ENST00000637439.1

CIITA-215, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-215ENST00000637439 ATG2BQ96BY7 2078 aa19.14■□□□□ 0.65
CIITA-215ENST00000637439 FRMD3A2A2Y4 597 aa19.14■□□□□ 0.65
CIITA-215ENST00000637439 GOLGA8IPA6NC78 632 aa19.14■□□□□ 0.65
CIITA-215ENST00000637439 GOLGA8JA6NMD2 632 aa19.14■□□□□ 0.65
CIITA-215ENST00000637439 TM4SF5O14894 197 aa19.14■□□□□ 0.65
CIITA-215ENST00000637439 TCF3P15923 654 aa19.14■□□□□ 0.65
CIITA-215ENST00000637439 PFKLP17858 780 aa19.14■□□□□ 0.65
CIITA-215ENST00000637439 MPLP40238 635 aa19.14■□□□□ 0.65
CIITA-215ENST00000637439 STAT6P42226 847 aa19.14■□□□□ 0.65
CIITA-215ENST00000637439 CASP5P51878 434 aa19.14■□□□□ 0.65
CIITA-215ENST00000637439 SURF1Q15526 300 aa19.14■□□□□ 0.65
CIITA-215ENST00000637439 CCDC6Q16204 474 aa19.14■□□□□ 0.65
CIITA-215ENST00000637439 SOWAHAQ2M3V2 549 aa19.14■□□□□ 0.65
CIITA-215ENST00000637439 EML3Q32P44 896 aa19.14■□□□□ 0.65
CIITA-215ENST00000637439 STPG1Q5TH74 334 aa19.14■□□□□ 0.65
CIITA-215ENST00000637439 FAM171BQ6P995 826 aa19.14■□□□□ 0.65
CIITA-215ENST00000637439 VSTM1Q6UX27 236 aa19.14■□□□□ 0.65
CIITA-215ENST00000637439 STXBP4Q6ZWJ1 553 aa19.14■□□□□ 0.65
CIITA-215ENST00000637439 OSTM1Q86WC4 334 aa19.14■□□□□ 0.65
CIITA-215ENST00000637439 TTC16Q8NEE8 873 aa19.14■□□□□ 0.65
CIITA-215ENST00000637439 NOC3LQ8WTT2 800 aaKnown RBP19.14■□□□□ 0.65
CIITA-215ENST00000637439 SPATA17Q96L03 361 aa19.14■□□□□ 0.65
CIITA-215ENST00000637439 CLIC6Q96NY7 704 aa19.14■□□□□ 0.65
CIITA-215ENST00000637439 CBWD1Q9BRT8 395 aa19.14■□□□□ 0.65
CIITA-215ENST00000637439 MTMR12Q9C0I1 747 aa19.14■□□□□ 0.65
CIITA-215ENST00000637439 PCIF1Q9H4Z3 704 aa19.14■□□□□ 0.65
CIITA-215ENST00000637439 PANK4Q9NVE7 773 aa19.14■□□□□ 0.65
CIITA-215ENST00000637439 EHD2Q9NZN4 543 aa19.14■□□□□ 0.65
CIITA-215ENST00000637439 GCNT4Q9P109 453 aa19.14■□□□□ 0.65
CIITA-215ENST00000637439 MAGEC2Q9UBF1 373 aaPredicted RBP19.14■□□□□ 0.65
CIITA-215ENST00000637439 SIX4Q9UIU6 781 aa19.14■□□□□ 0.65
CIITA-215ENST00000637439 CDH9Q9ULB4 789 aa19.14■□□□□ 0.65
CIITA-215ENST00000637439 WNT6Q9Y6F9 365 aa19.14■□□□□ 0.65
CIITA-215ENST00000637439 SDK1Q7Z5N4 2213 aa19.13■□□□□ 0.65
CIITA-215ENST00000637439 CHD8Q9HCK8 2581 aa19.13■□□□□ 0.65
CIITA-215ENST00000637439 NFATC1O95644 943 aa19.13■□□□□ 0.65
CIITA-215ENST00000637439 TNNC2P02585 160 aa19.13■□□□□ 0.65
CIITA-215ENST00000637439 HDCP19113 662 aa19.13■□□□□ 0.65
CIITA-215ENST00000637439 PSMD2Q13200 908 aa19.13■□□□□ 0.65
CIITA-215ENST00000637439 DMC1Q14565 340 aa19.13■□□□□ 0.65
CIITA-215ENST00000637439 C11orf74Q86VG3 221 aa19.13■□□□□ 0.65
CIITA-215ENST00000637439 CCDC65Q8IXS2 484 aa19.13■□□□□ 0.65
CIITA-215ENST00000637439 ARL14EPQ8N8R7 260 aaPredicted RBP19.13■□□□□ 0.65
CIITA-215ENST00000637439 SH3RF2Q8TEC5 729 aa19.13■□□□□ 0.65
CIITA-215ENST00000637439 SLC22A12Q96S37 553 aa19.13■□□□□ 0.65
CIITA-215ENST00000637439 DUSP15Q9H1R2 295 aaPredicted RBP19.13■□□□□ 0.65
CIITA-215ENST00000637439 INTS13Q9NVM9 706 aa19.13■□□□□ 0.65
CIITA-215ENST00000637439 ANGPTL2Q9UKU9 493 aa19.13■□□□□ 0.65
CIITA-215ENST00000637439 ARHGAP26Q9UNA1 814 aa19.13■□□□□ 0.65
CIITA-215ENST00000637439 MORC2Q9Y6X9 1032 aaPredicted RBP19.13■□□□□ 0.65
CIITA-215ENST00000637439 ANAPC1Q9H1A4 1944 aa19.12■□□□□ 0.65
CIITA-215ENST00000637439 ZNF233A6NK53 670 aa19.12■□□□□ 0.65
CIITA-215ENST00000637439 CUL4AQ13619 759 aa19.12■□□□□ 0.65
CIITA-215ENST00000637439 DUOXA2Q1HG44 320 aa19.12■□□□□ 0.65
CIITA-215ENST00000637439 LIMS2Q7Z4I7 341 aa19.12■□□□□ 0.65
CIITA-215ENST00000637439 KIAA1958Q8N8K9 716 aa19.12■□□□□ 0.65
CIITA-215ENST00000637439 HPDLQ96IR7 371 aa19.12■□□□□ 0.65
CIITA-215ENST00000637439 SYT15Q9BQS2 421 aa19.12■□□□□ 0.65
CIITA-215ENST00000637439 RXFP3Q9NSD7 469 aa19.12■□□□□ 0.65
CIITA-215ENST00000637439 CNOT1A5YKK6 2376 aaKnown RBP19.11■□□□□ 0.65
CIITA-215ENST00000637439 C2orf78A6NCI8 922 aa19.11■□□□□ 0.65
CIITA-215ENST00000637439 PRPF6O94906 941 aaKnown RBP19.11■□□□□ 0.65
CIITA-215ENST00000637439 ANXA13P27216 316 aa19.11■□□□□ 0.65
CIITA-215ENST00000637439 PPP3CCP48454 512 aa19.11■□□□□ 0.65
CIITA-215ENST00000637439 N4BP2L1Q5TBK1 243 aaPredicted RBP19.11■□□□□ 0.65
CIITA-215ENST00000637439 NAIF1Q69YI7 327 aaPredicted RBP19.11■□□□□ 0.65
CIITA-215ENST00000637439 EZH1Q92800 747 aaPredicted RBP19.11■□□□□ 0.65
CIITA-215ENST00000637439 LRRC27Q9C0I9 530 aa19.11■□□□□ 0.65
CIITA-215ENST00000637439 KIAA1586Q9HCI6 787 aa19.11■□□□□ 0.65
CIITA-215ENST00000637439 POLR3BQ9NW08 1133 aaPredicted RBP19.11■□□□□ 0.65
CIITA-215ENST00000637439 TRPM5Q9NZQ8 1165 aa19.11■□□□□ 0.65
CIITA-215ENST00000637439 HELZP42694 1942 aaKnown RBP19.11■□□□□ 0.65
CIITA-215ENST00000637439 KIAA1549LQ6ZVL6 1849 aa19.11■□□□□ 0.65
CIITA-215ENST00000637439 MAP1BP46821 2468 aaKnown RBP19.1■□□□□ 0.65
CIITA-215ENST00000637439 HCRTO43612 131 aa19.1■□□□□ 0.65
CIITA-215ENST00000637439 ATP2C2O75185 946 aa19.1■□□□□ 0.65
CIITA-215ENST00000637439 PMLP29590 882 aa19.1■□□□□ 0.65
CIITA-215ENST00000637439 GRIK1P39086 918 aa19.1■□□□□ 0.65
CIITA-215ENST00000637439 DGKEP52429 567 aa19.1■□□□□ 0.65
CIITA-215ENST00000637439 CEBPZQ03701 1054 aaKnown RBP19.1■□□□□ 0.65
CIITA-215ENST00000637439 RESTQ13127 1097 aa19.1■□□□□ 0.65
CIITA-215ENST00000637439 CCDC142Q17RM4 750 aa19.1■□□□□ 0.65
CIITA-215ENST00000637439 RNF43Q68DV7 783 aa19.1■□□□□ 0.65
CIITA-215ENST00000637439 SCARA3Q6AZY7 606 aa19.1■□□□□ 0.65
CIITA-215ENST00000637439 DENND5BQ6ZUT9 1274 aa19.1■□□□□ 0.65
CIITA-215ENST00000637439 TSTD1Q8NFU3 115 aa19.1■□□□□ 0.65
CIITA-215ENST00000637439 KBTBD7Q8WVZ9 684 aa19.1■□□□□ 0.65
CIITA-215ENST00000637439 MYLPFQ96A32 169 aa19.1■□□□□ 0.65
CIITA-215ENST00000637439 LSM14BQ9BX40 385 aaKnown RBP19.1■□□□□ 0.65
CIITA-215ENST00000637439 FGFBP2Q9BYJ0 223 aa19.1■□□□□ 0.65
CIITA-215ENST00000637439 MYO16Q9Y6X6 1858 aa19.09■□□□□ 0.65
CIITA-215ENST00000637439 TRIM66O15016 1216 aa19.09■□□□□ 0.65
CIITA-215ENST00000637439 CAVIN2O95810 425 aa19.09■□□□□ 0.65
CIITA-215ENST00000637439 WARSP23381 471 aaKnown RBP19.09■□□□□ 0.65
CIITA-215ENST00000637439 BDNFP23560 247 aa19.09■□□□□ 0.65
CIITA-215ENST00000637439 LMO2P25791 158 aa19.09■□□□□ 0.65
CIITA-215ENST00000637439 PSMC1P62191 440 aaKnown RBP19.09■□□□□ 0.65
CIITA-215ENST00000637439 SHC2P98077 582 aa19.09■□□□□ 0.65
CIITA-215ENST00000637439 CYP27A1Q02318 531 aa19.09■□□□□ 0.65
CIITA-215ENST00000637439 CREB5Q02930 508 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms