RNA–Protein interactions for RNA: ENST00000636466.1

GABRB3-219, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-219ENST00000636466 FGFBP2Q9BYJ0 223 aa14.8□□□□□ -0.04
GABRB3-219ENST00000636466 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.8□□□□□ -0.04
GABRB3-219ENST00000636466 TRIM33Q9UPN9 1127 aa14.8□□□□□ -0.04
GABRB3-219ENST00000636466 B2RBV5 119 aa14.8□□□□□ -0.04
GABRB3-219ENST00000636466 CCDC22O60826 627 aa14.8□□□□□ -0.04
GABRB3-219ENST00000636466 CSE1LP55060 971 aaKnown RBP14.8□□□□□ -0.04
GABRB3-219ENST00000636466 CHI3L2Q15782 390 aa14.8□□□□□ -0.04
GABRB3-219ENST00000636466 C6orf10Q5SRN2 563 aa14.8□□□□□ -0.04
GABRB3-219ENST00000636466 LRRC55Q6ZSA7 311 aa14.8□□□□□ -0.04
GABRB3-219ENST00000636466 C1orf186Q6ZWK4 172 aa14.8□□□□□ -0.04
GABRB3-219ENST00000636466 CREG2Q8IUH2 290 aa14.8□□□□□ -0.04
GABRB3-219ENST00000636466 ACTRT1Q8TDG2 376 aa14.8□□□□□ -0.04
GABRB3-219ENST00000636466 ZNF384Q8TF68 577 aa14.8□□□□□ -0.04
GABRB3-219ENST00000636466 KAT2BQ92831 832 aa14.8□□□□□ -0.04
GABRB3-219ENST00000636466 RANBP17Q9H2T7 1088 aaKnown RBP14.8□□□□□ -0.04
GABRB3-219ENST00000636466 ZFYVE28Q9HCC9 887 aa14.8□□□□□ -0.04
GABRB3-219ENST00000636466 LATS2Q9NRM7 1088 aa14.8□□□□□ -0.04
GABRB3-219ENST00000636466 CASTOR2A6NHX0 329 aa14.79□□□□□ -0.04
GABRB3-219ENST00000636466 TLR2O60603 784 aa14.79□□□□□ -0.04
GABRB3-219ENST00000636466 PPP1R11O60927 126 aaPredicted RBP14.79□□□□□ -0.04
GABRB3-219ENST00000636466 PTPRAP18433 802 aa14.79□□□□□ -0.04
GABRB3-219ENST00000636466 NFIL3Q16649 462 aa14.79□□□□□ -0.04
GABRB3-219ENST00000636466 C10orf120Q5SQS8 335 aa14.79□□□□□ -0.04
GABRB3-219ENST00000636466 ABRAQ8N0Z2 381 aa14.79□□□□□ -0.04
GABRB3-219ENST00000636466 SNX19Q92543 992 aa14.79□□□□□ -0.04
GABRB3-219ENST00000636466 UNKQ9C0B0 810 aaKnown RBP14.79□□□□□ -0.04
GABRB3-219ENST00000636466 ARHGEF38Q9NXL2 777 aa14.79□□□□□ -0.04
GABRB3-219ENST00000636466 NDE1Q9NXR1 346 aa14.79□□□□□ -0.04
GABRB3-219ENST00000636466 RRN3P2A6NIE6 340 aa14.79□□□□□ -0.04
GABRB3-219ENST00000636466 DPYSL4O14531 572 aa14.79□□□□□ -0.04
GABRB3-219ENST00000636466 PRRG1O14668 218 aa14.79□□□□□ -0.04
GABRB3-219ENST00000636466 IRF6O14896 467 aa14.79□□□□□ -0.04
GABRB3-219ENST00000636466 THEMIS2Q5TEJ8 643 aa14.79□□□□□ -0.04
GABRB3-219ENST00000636466 LONP2Q86WA8 852 aa14.79□□□□□ -0.04
GABRB3-219ENST00000636466 ADAM32Q8TC27 787 aa14.79□□□□□ -0.04
GABRB3-219ENST00000636466 STAMBPL1Q96FJ0 436 aa14.79□□□□□ -0.04
GABRB3-219ENST00000636466 GLT1D1Q96MS3 346 aa14.79□□□□□ -0.04
GABRB3-219ENST00000636466 ASCC2Q9H1I8 757 aaPredicted RBP14.79□□□□□ -0.04
GABRB3-219ENST00000636466 MAP3K20Q9NYL2 800 aaKnown RBP14.79□□□□□ -0.04
GABRB3-219ENST00000636466 SAE1Q9UBE0 346 aaPredicted RBP14.79□□□□□ -0.04
GABRB3-219ENST00000636466 USP18Q9UMW8 372 aa14.79□□□□□ -0.04
GABRB3-219ENST00000636466 CYB561D2O14569 222 aa14.79□□□□□ -0.04
GABRB3-219ENST00000636466 POLBP06746 335 aa14.79□□□□□ -0.04
GABRB3-219ENST00000636466 RARAP10276 462 aa14.79□□□□□ -0.04
GABRB3-219ENST00000636466 RARGP13631 454 aa14.79□□□□□ -0.04
GABRB3-219ENST00000636466 NNMTP40261 264 aa14.79□□□□□ -0.04
GABRB3-219ENST00000636466 CDC42EP1Q00587 391 aa14.79□□□□□ -0.04
GABRB3-219ENST00000636466 BMPR2Q13873 1038 aa14.79□□□□□ -0.04
GABRB3-219ENST00000636466 HSP90AA5PQ58FG0 334 aa14.79□□□□□ -0.04
GABRB3-219ENST00000636466 MCOLN2Q8IZK6 566 aa14.79□□□□□ -0.04
GABRB3-219ENST00000636466 PPHLN1Q8NEY8 458 aaKnown RBP14.79□□□□□ -0.04
GABRB3-219ENST00000636466 EDEM1Q92611 657 aa14.79□□□□□ -0.04
GABRB3-219ENST00000636466 CDCA5Q96FF9 252 aa14.79□□□□□ -0.04
GABRB3-219ENST00000636466 WDCPQ9H6R7 721 aa14.79□□□□□ -0.04
GABRB3-219ENST00000636466 IRAK4Q9NWZ3 460 aa14.79□□□□□ -0.04
GABRB3-219ENST00000636466 AURKCQ9UQB9 309 aa14.79□□□□□ -0.04
GABRB3-219ENST00000636466 ORC6Q9Y5N6 252 aa14.79□□□□□ -0.04
GABRB3-219ENST00000636466 LRRC8EQ6NSJ5 796 aa14.78□□□□□ -0.04
GABRB3-219ENST00000636466 SCUBE3Q8IX30 993 aa14.78□□□□□ -0.04
GABRB3-219ENST00000636466 DNAJB3Q8WWF6 145 aa14.78□□□□□ -0.04
GABRB3-219ENST00000636466 ROPN1BQ9BZX4 212 aaPredicted RBP14.78□□□□□ -0.04
GABRB3-219ENST00000636466 ROPN1Q9HAT0 212 aaPredicted RBP14.78□□□□□ -0.04
GABRB3-219ENST00000636466 XAB2Q9HCS7 855 aaKnown RBP14.78□□□□□ -0.04
GABRB3-219ENST00000636466 KCNMB3Q9NPA1 279 aa14.78□□□□□ -0.04
GABRB3-219ENST00000636466 GTPBP10A4D1E9 387 aaKnown RBP14.78□□□□□ -0.04
GABRB3-219ENST00000636466 CCT8L1PA6NM43 557 aa14.78□□□□□ -0.04
GABRB3-219ENST00000636466 ADAMTS3O15072 1205 aa14.78□□□□□ -0.04
GABRB3-219ENST00000636466 PIAS1O75925 651 aa14.78□□□□□ -0.04
GABRB3-219ENST00000636466 GLRBP48167 497 aa14.78□□□□□ -0.04
GABRB3-219ENST00000636466 MAP3K7CLP57077 242 aa14.78□□□□□ -0.04
GABRB3-219ENST00000636466 KCNMA1Q12791 1236 aa14.78□□□□□ -0.04
GABRB3-219ENST00000636466 CLEC16AQ2KHT3 1053 aa14.78□□□□□ -0.04
GABRB3-219ENST00000636466 MIIPQ5JXC2 388 aa14.78□□□□□ -0.04
GABRB3-219ENST00000636466 MTHFD1LQ6UB35 978 aa14.78□□□□□ -0.04
GABRB3-219ENST00000636466 MFSD7Q6UXD7 560 aa14.78□□□□□ -0.04
GABRB3-219ENST00000636466 NUP93Q8N1F7 819 aa14.78□□□□□ -0.04
GABRB3-219ENST00000636466 MKL1Q969V6 931 aa14.78□□□□□ -0.04
GABRB3-219ENST00000636466 SLC24A3Q9HC58 644 aa14.78□□□□□ -0.04
GABRB3-219ENST00000636466 URB1O60287 2271 aaKnown RBP14.78□□□□□ -0.04
GABRB3-219ENST00000636466 FRMPD4Q14CM0 1322 aa14.78□□□□□ -0.04
GABRB3-219ENST00000636466 FAM237AA0A1B0GTK4 181 aa14.78□□□□□ -0.04
GABRB3-219ENST00000636466 VDRP11473 427 aa14.78□□□□□ -0.04
GABRB3-219ENST00000636466 TARSP26639 723 aaKnown RBP14.78□□□□□ -0.04
GABRB3-219ENST00000636466 NDST1P52848 882 aa14.78□□□□□ -0.04
GABRB3-219ENST00000636466 CRY2Q49AN0 593 aa14.78□□□□□ -0.04
GABRB3-219ENST00000636466 ASAP3Q8TDY4 903 aa14.78□□□□□ -0.04
GABRB3-219ENST00000636466 SLC38A7Q9NVC3 462 aa14.78□□□□□ -0.04
GABRB3-219ENST00000636466 ESRRBO95718 433 aa14.78□□□□□ -0.04
GABRB3-219ENST00000636466 ACADSBP45954 432 aa14.78□□□□□ -0.04
GABRB3-219ENST00000636466 GEMIN4P57678 1058 aaKnown RBP14.78□□□□□ -0.04
GABRB3-219ENST00000636466 SPOCD1Q6ZMY3 1216 aa14.78□□□□□ -0.04
GABRB3-219ENST00000636466 PLEKHH3Q7Z736 793 aa14.78□□□□□ -0.04
GABRB3-219ENST00000636466 DACT3Q96B18 629 aaPredicted RBP14.78□□□□□ -0.04
GABRB3-219ENST00000636466 TMEM176AQ96HP8 235 aa14.78□□□□□ -0.04
GABRB3-219ENST00000636466 IGF2BP3O00425 579 aaKnown RBP eCLIP14.77□□□□□ -0.04
GABRB3-219ENST00000636466 SPTLC1O15269 473 aa14.77□□□□□ -0.04
GABRB3-219ENST00000636466 POMCP01189 267 aa14.77□□□□□ -0.04
GABRB3-219ENST00000636466 STIP1P31948 543 aaKnown RBP14.77□□□□□ -0.04
GABRB3-219ENST00000636466 SPRP35270 261 aaPredicted RBP14.77□□□□□ -0.04
GABRB3-219ENST00000636466 VGLL4Q14135 290 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms