RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 STAT5BP51692 787 aa12.12□□□□□ -0.47
COL11A1-211ENST00000635193 SPP2Q13103 211 aa12.12□□□□□ -0.47
COL11A1-211ENST00000635193 ZNF235Q14590 738 aa12.12□□□□□ -0.47
COL11A1-211ENST00000635193 CYP4A22Q5TCH4 519 aa12.12□□□□□ -0.47
COL11A1-211ENST00000635193 ZCCHC7Q8N3Z6 543 aaKnown RBP12.12□□□□□ -0.47
COL11A1-211ENST00000635193 TNIP2Q8NFZ5 429 aa12.12□□□□□ -0.47
COL11A1-211ENST00000635193 USP33Q8TEY7 942 aa12.12□□□□□ -0.47
COL11A1-211ENST00000635193 AGAP11Q8TF27 550 aa12.12□□□□□ -0.47
COL11A1-211ENST00000635193 GDPD5Q8WTR4 605 aa12.12□□□□□ -0.47
COL11A1-211ENST00000635193 RMDN1Q96DB5 314 aa12.12□□□□□ -0.47
COL11A1-211ENST00000635193 PAFAH2Q99487 392 aa12.12□□□□□ -0.47
COL11A1-211ENST00000635193 AGXT2Q9BYV1 514 aa12.12□□□□□ -0.47
COL11A1-211ENST00000635193 NOL6Q9H6R4 1146 aaKnown RBP12.12□□□□□ -0.47
COL11A1-211ENST00000635193 QTRT2Q9H974 415 aaKnown RBP12.12□□□□□ -0.47
COL11A1-211ENST00000635193 AFF4Q9UHB7 1163 aaKnown RBP12.12□□□□□ -0.47
COL11A1-211ENST00000635193 TRPC5OSA6NMA1 111 aa12.11□□□□□ -0.47
COL11A1-211ENST00000635193 ITGA4P13612 1032 aa12.11□□□□□ -0.47
COL11A1-211ENST00000635193 EPHB2P29323 1055 aa12.11□□□□□ -0.47
COL11A1-211ENST00000635193 ERVK-9P63128 1117 aa12.11□□□□□ -0.47
COL11A1-211ENST00000635193 RBP5P82980 135 aa12.11□□□□□ -0.47
COL11A1-211ENST00000635193 TTLL4Q14679 1199 aa12.11□□□□□ -0.47
COL11A1-211ENST00000635193 THEMIS2Q5TEJ8 643 aa12.11□□□□□ -0.47
COL11A1-211ENST00000635193 ZNF34Q8IZ26 560 aa12.11□□□□□ -0.47
COL11A1-211ENST00000635193 PRCCQ92733 491 aaPredicted RBP12.11□□□□□ -0.47
COL11A1-211ENST00000635193 WNK4Q96J92 1243 aa12.11□□□□□ -0.47
COL11A1-211ENST00000635193 TMEM79Q9BSE2 394 aa12.11□□□□□ -0.47
COL11A1-211ENST00000635193 ILKAPQ9H0C8 392 aaPredicted RBP12.11□□□□□ -0.47
COL11A1-211ENST00000635193 EHD4Q9H223 541 aa12.11□□□□□ -0.47
COL11A1-211ENST00000635193 EPS8L2Q9H6S3 715 aa12.11□□□□□ -0.47
COL11A1-211ENST00000635193 EFCAB1Q9HAE3 211 aa12.11□□□□□ -0.47
COL11A1-211ENST00000635193 SLC8A2Q9UPR5 921 aa12.11□□□□□ -0.47
COL11A1-211ENST00000635193 EEF2KO00418 725 aaKnown RBP12.11□□□□□ -0.47
COL11A1-211ENST00000635193 TRAPPC3O43617 180 aa12.11□□□□□ -0.47
COL11A1-211ENST00000635193 MMP10P09238 476 aa12.11□□□□□ -0.47
COL11A1-211ENST00000635193 ZNF23P17027 643 aa12.11□□□□□ -0.47
COL11A1-211ENST00000635193 AQP5P55064 265 aa12.11□□□□□ -0.47
COL11A1-211ENST00000635193 GPR162Q16538 588 aa12.11□□□□□ -0.47
COL11A1-211ENST00000635193 KBTBD12Q3ZCT8 623 aa12.11□□□□□ -0.47
COL11A1-211ENST00000635193 BTBD8Q5XKL5 378 aa12.11□□□□□ -0.47
COL11A1-211ENST00000635193 B3GNT6Q6ZMB0 384 aa12.11□□□□□ -0.47
COL11A1-211ENST00000635193 TMPRSS6Q8IU80 811 aa12.11□□□□□ -0.47
COL11A1-211ENST00000635193 TMEM237Q96Q45 408 aa12.11□□□□□ -0.47
COL11A1-211ENST00000635193 TRIM62Q9BVG3 475 aa12.11□□□□□ -0.47
COL11A1-211ENST00000635193 TRIM54Q9BYV2 358 aa12.11□□□□□ -0.47
COL11A1-211ENST00000635193 SNX9Q9Y5X1 595 aa12.11□□□□□ -0.47
COL11A1-211ENST00000635193 LINC00854A0A1B0GVQ3 168 aa12.11□□□□□ -0.47
COL11A1-211ENST00000635193 CASP4P49662 377 aa12.11□□□□□ -0.47
COL11A1-211ENST00000635193 SFSWAPQ12872 951 aaKnown RBP12.11□□□□□ -0.47
COL11A1-211ENST00000635193 PDK1Q15118 436 aa12.11□□□□□ -0.47
COL11A1-211ENST00000635193 NTRK3Q16288 839 aa12.11□□□□□ -0.47
COL11A1-211ENST00000635193 ZNF669Q96BR6 464 aaPredicted RBP12.11□□□□□ -0.47
COL11A1-211ENST00000635193 WRNIP1Q96S55 665 aa12.11□□□□□ -0.47
COL11A1-211ENST00000635193 FRMD8P1Q9BZ68 369 aaPredicted RBP12.11□□□□□ -0.47
COL11A1-211ENST00000635193 CYP39A1Q9NYL5 469 aa12.11□□□□□ -0.47
COL11A1-211ENST00000635193 SLC24A2Q9UI40 661 aa12.11□□□□□ -0.47
COL11A1-211ENST00000635193 SLC39A10Q9ULF5 831 aa12.11□□□□□ -0.47
COL11A1-211ENST00000635193 PRR12Q9ULL5 1215 aa12.11□□□□□ -0.47
COL11A1-211ENST00000635193 PCDHGB4Q9UN71 923 aa12.11□□□□□ -0.47
COL11A1-211ENST00000635193 NAALADL1Q9UQQ1 740 aa12.11□□□□□ -0.47
COL11A1-211ENST00000635193 TRIM24O15164 1050 aa12.11□□□□□ -0.47
COL11A1-211ENST00000635193 FKBP9O95302 570 aa12.11□□□□□ -0.47
COL11A1-211ENST00000635193 GSNP06396 782 aa12.11□□□□□ -0.47
COL11A1-211ENST00000635193 SERPINB5P36952 375 aa12.11□□□□□ -0.47
COL11A1-211ENST00000635193 KCNK10P57789 538 aa12.11□□□□□ -0.47
COL11A1-211ENST00000635193 PCNX4Q63HM2 1172 aa12.11□□□□□ -0.47
COL11A1-211ENST00000635193 FKBP9P1Q75LS8 142 aa12.11□□□□□ -0.47
COL11A1-211ENST00000635193 CLVS1Q8IUQ0 354 aaPredicted RBP12.11□□□□□ -0.47
COL11A1-211ENST00000635193 TSEN2Q8NCE0 465 aaKnown RBP12.11□□□□□ -0.47
COL11A1-211ENST00000635193 RMND5BQ96G75 393 aaPredicted RBP12.11□□□□□ -0.47
COL11A1-211ENST00000635193 RIT2Q99578 217 aa12.11□□□□□ -0.47
COL11A1-211ENST00000635193 TLR10Q9BXR5 811 aa12.11□□□□□ -0.47
COL11A1-211ENST00000635193 RNPEPL1Q9HAU8 725 aa12.11□□□□□ -0.47
COL11A1-211ENST00000635193 CORO1CQ9ULV4 474 aaPredicted RBP12.11□□□□□ -0.47
COL11A1-211ENST00000635193 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.11□□□□□ -0.47
COL11A1-211ENST00000635193 CES2O00748 559 aa12.1□□□□□ -0.47
COL11A1-211ENST00000635193 MFN2O95140 757 aa12.1□□□□□ -0.47
COL11A1-211ENST00000635193 MYL3P08590 195 aa12.1□□□□□ -0.47
COL11A1-211ENST00000635193 EMC2Q15006 297 aa12.1□□□□□ -0.47
COL11A1-211ENST00000635193 ZBTB49Q6ZSB9 765 aa12.1□□□□□ -0.47
COL11A1-211ENST00000635193 MED15Q96RN5 788 aa12.1□□□□□ -0.47
COL11A1-211ENST00000635193 GORASP1Q9BQQ3 440 aa12.1□□□□□ -0.47
COL11A1-211ENST00000635193 SPON2Q9BUD6 331 aa12.1□□□□□ -0.47
COL11A1-211ENST00000635193 NIF3L1Q9GZT8 377 aa12.1□□□□□ -0.47
COL11A1-211ENST00000635193 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.1□□□□□ -0.47
COL11A1-211ENST00000635193 TMEM161AQ9NX61 479 aa12.1□□□□□ -0.47
COL11A1-211ENST00000635193 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.1□□□□□ -0.47
COL11A1-211ENST00000635193 FAM32AQ9Y421 112 aaKnown RBP12.1□□□□□ -0.47
COL11A1-211ENST00000635193 TM9SF1O15321 606 aa12.1□□□□□ -0.47
COL11A1-211ENST00000635193 C21orf2O43822 256 aa12.1□□□□□ -0.47
COL11A1-211ENST00000635193 GZMAP12544 262 aa12.1□□□□□ -0.47
COL11A1-211ENST00000635193 ANO4Q32M45 955 aa12.1□□□□□ -0.47
COL11A1-211ENST00000635193 TSHZ1Q6ZSZ6 1077 aa12.1□□□□□ -0.47
COL11A1-211ENST00000635193 CREG2Q8IUH2 290 aa12.1□□□□□ -0.47
COL11A1-211ENST00000635193 AFG1LQ8WV93 481 aa12.1□□□□□ -0.47
COL11A1-211ENST00000635193 DCDC2Q9UHG0 476 aa12.1□□□□□ -0.47
COL11A1-211ENST00000635193 PTPRUQ92729 1446 aa12.1□□□□□ -0.47
COL11A1-211ENST00000635193 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.1□□□□□ -0.47
COL11A1-211ENST00000635193 RNF103O00237 685 aa12.1□□□□□ -0.47
COL11A1-211ENST00000635193 MED24O75448 989 aa12.1□□□□□ -0.47
COL11A1-211ENST00000635193 SMNDC1O75940 238 aaKnown RBP eCLIP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms