RNA–Protein interactions for RNA: ENST00000634435.1

SMARCA2-223, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 5

Gene SMARCA2, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-223	ENST00000634435	MUTYH	Q9UIF7	546 aa		7.4	□□□□□ -1.22
SMARCA2-223	ENST00000634435	TMEM59L	Q9UK28	342 aa		7.4	□□□□□ -1.22
SMARCA2-223	ENST00000634435	INVS	Q9Y283	1065 aa		7.4	□□□□□ -1.22
SMARCA2-223	ENST00000634435	PCDHGA9	Q9Y5G4	932 aa	Known RBP	7.4	□□□□□ -1.22
SMARCA2-223	ENST00000634435	PCDHGA8	Q9Y5G5	932 aa		7.4	□□□□□ -1.22
SMARCA2-223	ENST00000634435	PCDHGA7	Q9Y5G6	932 aa		7.4	□□□□□ -1.22
SMARCA2-223	ENST00000634435	PCDHGA6	Q9Y5G7	932 aa		7.4	□□□□□ -1.22
SMARCA2-223	ENST00000634435	PCDHGA3	Q9Y5H0	932 aa		7.4	□□□□□ -1.22
SMARCA2-223	ENST00000634435	PCDHGA2	Q9Y5H1	932 aa		7.4	□□□□□ -1.22
SMARCA2-223	ENST00000634435	MYO7A	Q13402	2215 aa		7.4	□□□□□ -1.23
SMARCA2-223	ENST00000634435	PTPRS	Q13332	1948 aa		7.39	□□□□□ -1.23
SMARCA2-223	ENST00000634435	SI	P14410	1827 aa		7.39	□□□□□ -1.23
SMARCA2-223	ENST00000634435	HGS	O14964	777 aa	Predicted RBP	7.39	□□□□□ -1.23
SMARCA2-223	ENST00000634435	XPOT	O43592	962 aa	Known RBP	7.39	□□□□□ -1.23
SMARCA2-223	ENST00000634435	NCK2	O43639	380 aa		7.39	□□□□□ -1.23
SMARCA2-223	ENST00000634435	NRDC	O43847	1150 aa		7.39	□□□□□ -1.23
SMARCA2-223	ENST00000634435	PPFIA4	O75335	1185 aa		7.39	□□□□□ -1.23
SMARCA2-223	ENST00000634435	H2AFY	O75367	372 aa	Known RBP	7.39	□□□□□ -1.23
SMARCA2-223	ENST00000634435	TADA3	O75528	432 aa		7.39	□□□□□ -1.23
SMARCA2-223	ENST00000634435	LGALS2	P05162	132 aa		7.39	□□□□□ -1.23
SMARCA2-223	ENST00000634435	PARP1	P09874	1014 aa	Known RBP	7.39	□□□□□ -1.23
SMARCA2-223	ENST00000634435	SMIM10L2A	P0DMW4	78 aa		7.39	□□□□□ -1.23
SMARCA2-223	ENST00000634435	SMIM10L2B	P0DMW5	78 aa		7.39	□□□□□ -1.23
SMARCA2-223	ENST00000634435	MVK	Q03426	396 aa		7.39	□□□□□ -1.23
SMARCA2-223	ENST00000634435	ADCY1	Q08828	1119 aa		7.39	□□□□□ -1.23
SMARCA2-223	ENST00000634435	ODF1	Q14990	250 aa		7.39	□□□□□ -1.23
SMARCA2-223	ENST00000634435	PDCD1	Q15116	288 aa		7.39	□□□□□ -1.23
SMARCA2-223	ENST00000634435	SEC23A	Q15436	765 aa		7.39	□□□□□ -1.23
SMARCA2-223	ENST00000634435	SLC14A2	Q15849	920 aa		7.39	□□□□□ -1.23
SMARCA2-223	ENST00000634435	HSDL1	Q3SXM5	330 aa		7.39	□□□□□ -1.23
SMARCA2-223	ENST00000634435	CCDC178	Q5BJE1	867 aa		7.39	□□□□□ -1.23
SMARCA2-223	ENST00000634435	NKAPL	Q5M9Q1	402 aa		7.39	□□□□□ -1.23
SMARCA2-223	ENST00000634435	CELF3	Q5SZQ8	465 aa	Known RBP	7.39	□□□□□ -1.23
SMARCA2-223	ENST00000634435	KCNV1	Q6PIU1	500 aa		7.39	□□□□□ -1.23
SMARCA2-223	ENST00000634435	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	7.39	□□□□□ -1.23
SMARCA2-223	ENST00000634435	DCP2	Q8IU60	420 aa	Known RBP	7.39	□□□□□ -1.23
SMARCA2-223	ENST00000634435	SPPL2C	Q8IUH8	684 aa		7.39	□□□□□ -1.23
SMARCA2-223	ENST00000634435	TRIM48	Q8IWZ4	208 aa		7.39	□□□□□ -1.23
SMARCA2-223	ENST00000634435	CMIP	Q8IY22	773 aa		7.39	□□□□□ -1.23
SMARCA2-223	ENST00000634435	SAMD3	Q8N6K7	520 aa		7.39	□□□□□ -1.23
SMARCA2-223	ENST00000634435	APBB2	Q92870	758 aa		7.39	□□□□□ -1.23
SMARCA2-223	ENST00000634435	TOP1MT	Q969P6	601 aa		7.39	□□□□□ -1.23
SMARCA2-223	ENST00000634435	CLIP3	Q96DZ5	547 aa		7.39	□□□□□ -1.23
SMARCA2-223	ENST00000634435	CCDC120	Q96HB5	630 aa		7.39	□□□□□ -1.23
SMARCA2-223	ENST00000634435	SNX27	Q96L92	541 aa		7.39	□□□□□ -1.23
SMARCA2-223	ENST00000634435	C16orf92	Q96LL3	132 aa		7.39	□□□□□ -1.23
SMARCA2-223	ENST00000634435	PDCD2L	Q9BRP1	358 aa		7.39	□□□□□ -1.23
SMARCA2-223	ENST00000634435	C16orf70	Q9BSU1	422 aa		7.39	□□□□□ -1.23
SMARCA2-223	ENST00000634435	ADAMTS10	Q9H324	1103 aa		7.39	□□□□□ -1.23
SMARCA2-223	ENST00000634435	MS4A5	Q9H3V2	200 aa		7.39	□□□□□ -1.23
SMARCA2-223	ENST00000634435	MLXIP	Q9HAP2	919 aa		7.39	□□□□□ -1.23
SMARCA2-223	ENST00000634435	VAT1L	Q9HCJ6	419 aa		7.39	□□□□□ -1.23
SMARCA2-223	ENST00000634435	SLAMF8	Q9P0V8	285 aa		7.39	□□□□□ -1.23
SMARCA2-223	ENST00000634435	ZNF318	Q5VUA4	2279 aa		7.39	□□□□□ -1.23
SMARCA2-223	ENST00000634435	COL4A6	Q14031	1691 aa		7.38	□□□□□ -1.23
SMARCA2-223	ENST00000634435	ADGRA3	Q8IWK6	1321 aa		7.38	□□□□□ -1.23
SMARCA2-223	ENST00000634435	SALL3	Q9BXA9	1300 aa		7.38	□□□□□ -1.23
SMARCA2-223	ENST00000634435	BUB1B	O60566	1050 aa	Predicted RBP	7.38	□□□□□ -1.23
SMARCA2-223	ENST00000634435	NTRK1	P04629	796 aa		7.38	□□□□□ -1.23
SMARCA2-223	ENST00000634435	PTPN1	P18031	435 aa	Known RBP	7.38	□□□□□ -1.23
SMARCA2-223	ENST00000634435	LPO	P22079	712 aa	Predicted RBP	7.38	□□□□□ -1.23
SMARCA2-223	ENST00000634435	CCND2	P30279	289 aa		7.38	□□□□□ -1.23
SMARCA2-223	ENST00000634435	HOXA13	P31271	388 aa	Predicted RBP	7.38	□□□□□ -1.23
SMARCA2-223	ENST00000634435	HSD17B4	P51659	736 aa		7.38	□□□□□ -1.23
SMARCA2-223	ENST00000634435	SMAD4	Q13485	552 aa	Known RBP	7.38	□□□□□ -1.23
SMARCA2-223	ENST00000634435	PPP4R4	Q6NUP7	873 aa		7.38	□□□□□ -1.23
SMARCA2-223	ENST00000634435	EPM2AIP1	Q7L775	607 aa	Predicted RBP	7.38	□□□□□ -1.23
SMARCA2-223	ENST00000634435	SMC5	Q8IY18	1101 aa		7.38	□□□□□ -1.23
SMARCA2-223	ENST00000634435	OXR1	Q8N573	874 aa		7.38	□□□□□ -1.23
SMARCA2-223	ENST00000634435	NETO2	Q8NC67	525 aa		7.38	□□□□□ -1.23
SMARCA2-223	ENST00000634435	PDZD8	Q8NEN9	1154 aa		7.38	□□□□□ -1.23
SMARCA2-223	ENST00000634435	NUP43	Q8NFH3	380 aa		7.38	□□□□□ -1.23
SMARCA2-223	ENST00000634435	IL31RA	Q8NI17	732 aa		7.38	□□□□□ -1.23
SMARCA2-223	ENST00000634435	SEC14L1	Q92503	715 aa		7.38	□□□□□ -1.23
SMARCA2-223	ENST00000634435	ANKS1A	Q92625	1134 aa		7.38	□□□□□ -1.23
SMARCA2-223	ENST00000634435	IL17RA	Q96F46	866 aa		7.38	□□□□□ -1.23
SMARCA2-223	ENST00000634435	AMN	Q9BXJ7	453 aa		7.38	□□□□□ -1.23
SMARCA2-223	ENST00000634435	JMJD4	Q9H9V9	463 aa		7.38	□□□□□ -1.23
SMARCA2-223	ENST00000634435	MYOT	Q9UBF9	498 aa		7.38	□□□□□ -1.23
SMARCA2-223	ENST00000634435	KCNG1	Q9UIX4	513 aa		7.38	□□□□□ -1.23
SMARCA2-223	ENST00000634435	ZNF215	Q9UL58	517 aa	Predicted RBP	7.38	□□□□□ -1.23
SMARCA2-223	ENST00000634435	TRIP12	Q14669	1992 aa	Predicted RBP	7.38	□□□□□ -1.23
SMARCA2-223	ENST00000634435	FITM1	A5D6W6	292 aa		7.37	□□□□□ -1.23
SMARCA2-223	ENST00000634435	C5orf67	F2Z3F1	127 aa		7.37	□□□□□ -1.23
SMARCA2-223	ENST00000634435	ZNF213	O14771	459 aa		7.37	□□□□□ -1.23
SMARCA2-223	ENST00000634435	SLC27A2	O14975	620 aa		7.37	□□□□□ -1.23
SMARCA2-223	ENST00000634435	GRM6	O15303	877 aa		7.37	□□□□□ -1.23
SMARCA2-223	ENST00000634435	MBTPS2	O43462	519 aa		7.37	□□□□□ -1.23
SMARCA2-223	ENST00000634435	TBX10	O75333	385 aa		7.37	□□□□□ -1.23
SMARCA2-223	ENST00000634435	IL33	O95760	270 aa		7.37	□□□□□ -1.23
SMARCA2-223	ENST00000634435	C4BPA	P04003	597 aa	Known RBP	7.37	□□□□□ -1.23
SMARCA2-223	ENST00000634435	MSL3P1	P0C860	447 aa		7.37	□□□□□ -1.23
SMARCA2-223	ENST00000634435	GLI4	P10075	376 aa		7.37	□□□□□ -1.23
SMARCA2-223	ENST00000634435	GHR	P10912	638 aa		7.37	□□□□□ -1.23
SMARCA2-223	ENST00000634435	ENPP1	P22413	925 aa		7.37	□□□□□ -1.23
SMARCA2-223	ENST00000634435	TACR1	P25103	407 aa		7.37	□□□□□ -1.23
SMARCA2-223	ENST00000634435	HOXC8	P31273	242 aa		7.37	□□□□□ -1.23
SMARCA2-223	ENST00000634435	BMPR1A	P36894	532 aa		7.37	□□□□□ -1.23
SMARCA2-223	ENST00000634435	NDUFV1	P49821	464 aa		7.37	□□□□□ -1.23
SMARCA2-223	ENST00000634435	NT5C2	P49902	561 aa		7.37	□□□□□ -1.23

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms