RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 KCNK3O14649 394 aa13.13□□□□□ -0.31
SYNGAP1-207ENST00000628646 FAM26DQ5JW98 314 aa13.13□□□□□ -0.31
SYNGAP1-207ENST00000628646 UBXN11Q5T124 520 aa13.13□□□□□ -0.31
SYNGAP1-207ENST00000628646 CCDC50Q8IVM0 306 aa13.13□□□□□ -0.31
SYNGAP1-207ENST00000628646 HERC6Q8IVU3 1022 aa13.13□□□□□ -0.31
SYNGAP1-207ENST00000628646 CCDC117Q8IWD4 279 aaPredicted RBP13.13□□□□□ -0.31
SYNGAP1-207ENST00000628646 FBXO22Q8NEZ5 403 aa13.13□□□□□ -0.31
SYNGAP1-207ENST00000628646 TMEM176AQ96HP8 235 aa13.13□□□□□ -0.31
SYNGAP1-207ENST00000628646 ZMAT2Q96NC0 199 aaKnown RBP13.13□□□□□ -0.31
SYNGAP1-207ENST00000628646 ASS1P00966 412 aaKnown RBP13.13□□□□□ -0.31
SYNGAP1-207ENST00000628646 OR1D2P34982 312 aa13.13□□□□□ -0.31
SYNGAP1-207ENST00000628646 MGAT3Q09327 533 aa13.13□□□□□ -0.31
SYNGAP1-207ENST00000628646 RAB30Q15771 203 aa13.13□□□□□ -0.31
SYNGAP1-207ENST00000628646 CRELD2Q6UXH1 353 aaPredicted RBP13.13□□□□□ -0.31
SYNGAP1-207ENST00000628646 OSBPL7Q9BZF2 842 aa13.13□□□□□ -0.31
SYNGAP1-207ENST00000628646 HAPLN2Q9GZV7 340 aa13.13□□□□□ -0.31
SYNGAP1-207ENST00000628646 NRDE2Q9H7Z3 1164 aa13.13□□□□□ -0.31
SYNGAP1-207ENST00000628646 STYXL1Q9Y6J8 313 aa13.13□□□□□ -0.31
SYNGAP1-207ENST00000628646 F8VZ95 297 aa13.13□□□□□ -0.31
SYNGAP1-207ENST00000628646 H0YGN5 161 aa13.13□□□□□ -0.31
SYNGAP1-207ENST00000628646 C4BPAP04003 597 aaKnown RBP13.13□□□□□ -0.31
SYNGAP1-207ENST00000628646 SLC11A1P49279 550 aa13.13□□□□□ -0.31
SYNGAP1-207ENST00000628646 GLUD2P49448 558 aa13.13□□□□□ -0.31
SYNGAP1-207ENST00000628646 ANKS3Q6ZW76 656 aa13.13□□□□□ -0.31
SYNGAP1-207ENST00000628646 TMEM86AQ8N2M4 240 aa13.13□□□□□ -0.31
SYNGAP1-207ENST00000628646 FBXL18Q96ME1 805 aa13.13□□□□□ -0.31
SYNGAP1-207ENST00000628646 TSPAN18Q96SJ8 248 aa13.13□□□□□ -0.31
SYNGAP1-207ENST00000628646 MIOSQ9NXC5 875 aa13.13□□□□□ -0.31
SYNGAP1-207ENST00000628646 SSX2IPQ9Y2D8 614 aa13.13□□□□□ -0.31
SYNGAP1-207ENST00000628646 ZSWIM8A7E2V4 1837 aa13.13□□□□□ -0.31
SYNGAP1-207ENST00000628646 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.13□□□□□ -0.31
SYNGAP1-207ENST00000628646 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.13□□□□□ -0.31
SYNGAP1-207ENST00000628646 PPEF2O14830 753 aa13.13□□□□□ -0.31
SYNGAP1-207ENST00000628646 ACO1P21399 889 aaKnown RBP13.13□□□□□ -0.31
SYNGAP1-207ENST00000628646 STILQ15468 1287 aa13.13□□□□□ -0.31
SYNGAP1-207ENST00000628646 RHOT2Q8IXI1 618 aa13.13□□□□□ -0.31
SYNGAP1-207ENST00000628646 TPCN2Q8NHX9 752 aa13.13□□□□□ -0.31
SYNGAP1-207ENST00000628646 CPA5Q8WXQ8 436 aa13.13□□□□□ -0.31
SYNGAP1-207ENST00000628646 FAM204AQ9H8W3 233 aa13.13□□□□□ -0.31
SYNGAP1-207ENST00000628646 ALG13Q9NP73 1137 aaKnown RBP13.13□□□□□ -0.31
SYNGAP1-207ENST00000628646 SPATA31D3P0C874 917 aa13.12□□□□□ -0.31
SYNGAP1-207ENST00000628646 CFAP58Q5T655 872 aa13.12□□□□□ -0.31
SYNGAP1-207ENST00000628646 SPATA31D4Q6ZUB0 917 aa13.12□□□□□ -0.31
SYNGAP1-207ENST00000628646 MAIP1Q8WWC4 291 aa13.12□□□□□ -0.31
SYNGAP1-207ENST00000628646 LRRC45Q96CN5 670 aa13.12□□□□□ -0.31
SYNGAP1-207ENST00000628646 AGPAT1Q99943 283 aa13.12□□□□□ -0.31
SYNGAP1-207ENST00000628646 C11orf84Q9BUA3 381 aaPredicted RBP13.12□□□□□ -0.31
SYNGAP1-207ENST00000628646 PTPRHQ9HD43 1115 aa13.12□□□□□ -0.31
SYNGAP1-207ENST00000628646 CNTN3Q9P232 1028 aa13.12□□□□□ -0.31
SYNGAP1-207ENST00000628646 SHOX2O60902 331 aaPredicted RBP13.12□□□□□ -0.31
SYNGAP1-207ENST00000628646 FAM153BP0C7A2 387 aa13.12□□□□□ -0.31
SYNGAP1-207ENST00000628646 RPL17P18621 184 aaKnown RBP13.12□□□□□ -0.31
SYNGAP1-207ENST00000628646 CYP3A5P20815 502 aa13.12□□□□□ -0.31
SYNGAP1-207ENST00000628646 GPM6BQ13491 265 aa13.12□□□□□ -0.31
SYNGAP1-207ENST00000628646 CDO1Q16878 200 aa13.12□□□□□ -0.31
SYNGAP1-207ENST00000628646 TRIM71Q2Q1W2 868 aaKnown RBP13.12□□□□□ -0.31
SYNGAP1-207ENST00000628646 FAM153CQ494X1 144 aa13.12□□□□□ -0.31
SYNGAP1-207ENST00000628646 LLGL2Q6P1M3 1020 aa13.12□□□□□ -0.31
SYNGAP1-207ENST00000628646 SND1Q7KZF4 910 aaKnown RBP eCLIP13.12□□□□□ -0.31
SYNGAP1-207ENST00000628646 AUTS2Q8WXX7 1259 aa13.12□□□□□ -0.31
SYNGAP1-207ENST00000628646 TRIM11Q96F44 468 aa13.12□□□□□ -0.31
SYNGAP1-207ENST00000628646 ELAC1Q9H777 363 aaKnown RBP13.12□□□□□ -0.31
SYNGAP1-207ENST00000628646 TRPC7Q9HCX4 862 aa13.12□□□□□ -0.31
SYNGAP1-207ENST00000628646 KRT82Q9NSB4 513 aa13.12□□□□□ -0.31
SYNGAP1-207ENST00000628646 FAM153AQ9UHL3 310 aa13.12□□□□□ -0.31
SYNGAP1-207ENST00000628646 INTUQ9ULD6 942 aa13.12□□□□□ -0.31
SYNGAP1-207ENST00000628646 RWDD3Q9Y3V2 267 aa13.12□□□□□ -0.31
SYNGAP1-207ENST00000628646 PCDHB5Q9Y5E4 795 aa13.12□□□□□ -0.31
SYNGAP1-207ENST00000628646 CEP350Q5VT06 3117 aa13.12□□□□□ -0.31
SYNGAP1-207ENST00000628646 MYO1FO00160 1098 aa13.12□□□□□ -0.31
SYNGAP1-207ENST00000628646 RNF8O76064 485 aa13.12□□□□□ -0.31
SYNGAP1-207ENST00000628646 CA3P07451 260 aa13.12□□□□□ -0.31
SYNGAP1-207ENST00000628646 OR4Q2P0C623 313 aa13.12□□□□□ -0.31
SYNGAP1-207ENST00000628646 SRGAP2BP0DMP2 458 aa13.12□□□□□ -0.31
SYNGAP1-207ENST00000628646 NKX3-2P78367 333 aa13.12□□□□□ -0.31
SYNGAP1-207ENST00000628646 GCNT1Q02742 428 aa13.12□□□□□ -0.31
SYNGAP1-207ENST00000628646 PHLDB3Q6NSJ2 640 aa13.12□□□□□ -0.31
SYNGAP1-207ENST00000628646 PLCD3Q8N3E9 789 aa13.12□□□□□ -0.31
SYNGAP1-207ENST00000628646 PLEKHO2Q8TD55 490 aa13.12□□□□□ -0.31
SYNGAP1-207ENST00000628646 IFT81Q8WYA0 676 aa13.12□□□□□ -0.31
SYNGAP1-207ENST00000628646 CDY1Q9Y6F8 540 aa13.12□□□□□ -0.31
SYNGAP1-207ENST00000628646 A0A0A6YYK5 440 aaPredicted RBP13.11□□□□□ -0.31
SYNGAP1-207ENST00000628646 TULP2O00295 520 aa13.11□□□□□ -0.31
SYNGAP1-207ENST00000628646 CALCAP01258 141 aa13.11□□□□□ -0.31
SYNGAP1-207ENST00000628646 VDRP11473 427 aa13.11□□□□□ -0.31
SYNGAP1-207ENST00000628646 KCNE1P15382 129 aa13.11□□□□□ -0.31
SYNGAP1-207ENST00000628646 CARSP49589 748 aaKnown RBP13.11□□□□□ -0.31
SYNGAP1-207ENST00000628646 AFF1P51825 1210 aaKnown RBP13.11□□□□□ -0.31
SYNGAP1-207ENST00000628646 TIGD5Q53EQ6 642 aa13.11□□□□□ -0.31
SYNGAP1-207ENST00000628646 SLC2A14Q8TDB8 520 aa13.11□□□□□ -0.31
SYNGAP1-207ENST00000628646 ZNF516Q92618 1163 aa13.11□□□□□ -0.31
SYNGAP1-207ENST00000628646 TCF25Q9BQ70 676 aa13.11□□□□□ -0.31
SYNGAP1-207ENST00000628646 TLE6Q9H808 572 aa13.11□□□□□ -0.31
SYNGAP1-207ENST00000628646 A6NNZ2 444 aa13.11□□□□□ -0.31
SYNGAP1-207ENST00000628646 DAPK3O43293 454 aa13.11□□□□□ -0.31
SYNGAP1-207ENST00000628646 ADH1AP07327 375 aa13.11□□□□□ -0.31
SYNGAP1-207ENST00000628646 BDNFP23560 247 aa13.11□□□□□ -0.31
SYNGAP1-207ENST00000628646 MAP3K7CLP57077 242 aa13.11□□□□□ -0.31
SYNGAP1-207ENST00000628646 TUBB8Q3ZCM7 444 aa13.11□□□□□ -0.31
SYNGAP1-207ENST00000628646 CLLU1OSQ5K130 101 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms