RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 SERPINA13PQ6UXR4 307 aa9.51□□□□□ -0.89
HDAC9-229ENST00000622668 TAS2R42Q7RTR8 314 aa9.51□□□□□ -0.89
HDAC9-229ENST00000622668 TFAP2DQ7Z6R9 452 aa9.51□□□□□ -0.89
HDAC9-229ENST00000622668 EIF3CQ99613 913 aaKnown RBP9.51□□□□□ -0.89
HDAC9-229ENST00000622668 PDZD7Q9H5P4 517 aa9.51□□□□□ -0.89
HDAC9-229ENST00000622668 PFDN4Q9NQP4 134 aa9.51□□□□□ -0.89
HDAC9-229ENST00000622668 XPNPEP1Q9NQW7 623 aa9.51□□□□□ -0.89
HDAC9-229ENST00000622668 CACNG4Q9UBN1 327 aa9.51□□□□□ -0.89
HDAC9-229ENST00000622668 CDH9Q9ULB4 789 aa9.51□□□□□ -0.89
HDAC9-229ENST00000622668 MRPS17Q9Y2R5 130 aaKnown RBP9.51□□□□□ -0.89
HDAC9-229ENST00000622668 THSD7AQ9UPZ6 1657 aa9.51□□□□□ -0.89
HDAC9-229ENST00000622668 MYH2Q9UKX2 1941 aa9.51□□□□□ -0.89
HDAC9-229ENST00000622668 RTN2O75298 545 aa9.51□□□□□ -0.89
HDAC9-229ENST00000622668 AKT1P31749 480 aa9.51□□□□□ -0.89
HDAC9-229ENST00000622668 ARL4DP49703 201 aa9.51□□□□□ -0.89
HDAC9-229ENST00000622668 PPARDQ03181 441 aa9.51□□□□□ -0.89
HDAC9-229ENST00000622668 LPIN1Q14693 890 aa9.51□□□□□ -0.89
HDAC9-229ENST00000622668 VARS2Q5ST30 1063 aaKnown RBP9.51□□□□□ -0.89
HDAC9-229ENST00000622668 KLHDC7AQ5VTJ3 777 aa9.51□□□□□ -0.89
HDAC9-229ENST00000622668 RAPH1Q70E73 1250 aa9.51□□□□□ -0.89
HDAC9-229ENST00000622668 SERINC5Q86VE9 423 aa9.51□□□□□ -0.89
HDAC9-229ENST00000622668 EMC1Q8N766 993 aa9.51□□□□□ -0.89
HDAC9-229ENST00000622668 B3GALNT2Q8NCR0 500 aa9.51□□□□□ -0.89
HDAC9-229ENST00000622668 TSR3Q9UJK0 312 aaKnown RBP9.51□□□□□ -0.89
HDAC9-229ENST00000622668 ARFGEF2Q9Y6D5 1785 aa9.51□□□□□ -0.89
HDAC9-229ENST00000622668 PPP1R12AO14974 1030 aaPredicted RBP9.51□□□□□ -0.89
HDAC9-229ENST00000622668 CCR1P32246 355 aa9.51□□□□□ -0.89
HDAC9-229ENST00000622668 PRAMEP78395 509 aa9.51□□□□□ -0.89
HDAC9-229ENST00000622668 ZNF211Q13398 564 aaPredicted RBP9.51□□□□□ -0.89
HDAC9-229ENST00000622668 PCSK7Q16549 785 aa9.51□□□□□ -0.89
HDAC9-229ENST00000622668 CENPPQ6IPU0 288 aa9.51□□□□□ -0.89
HDAC9-229ENST00000622668 CCDC62Q6P9F0 684 aa9.51□□□□□ -0.89
HDAC9-229ENST00000622668 SUGP1Q8IWZ8 645 aaKnown RBP9.51□□□□□ -0.89
HDAC9-229ENST00000622668 SCUBE3Q8IX30 993 aa9.51□□□□□ -0.89
HDAC9-229ENST00000622668 NAT16Q8N8M0 369 aa9.51□□□□□ -0.89
HDAC9-229ENST00000622668 RSPH1Q8WYR4 309 aa9.51□□□□□ -0.89
HDAC9-229ENST00000622668 ATP6V1E2Q96A05 226 aa9.51□□□□□ -0.89
HDAC9-229ENST00000622668 SCYL1Q96KG9 808 aa9.51□□□□□ -0.89
HDAC9-229ENST00000622668 CARD6Q9BX69 1037 aa9.51□□□□□ -0.89
HDAC9-229ENST00000622668 ANGPTL3Q9Y5C1 460 aa9.51□□□□□ -0.89
HDAC9-229ENST00000622668 A0A087X0B3 334 aa9.51□□□□□ -0.89
HDAC9-229ENST00000622668 LRRIQ3A6PVS8 624 aaPredicted RBP9.51□□□□□ -0.89
HDAC9-229ENST00000622668 H3BQ06 376 aaPredicted RBP9.51□□□□□ -0.89
HDAC9-229ENST00000622668 ATP5BP06576 529 aaKnown RBP9.51□□□□□ -0.89
HDAC9-229ENST00000622668 IVLP07476 585 aa9.51□□□□□ -0.89
HDAC9-229ENST00000622668 PPP2R5EQ16537 467 aa9.51□□□□□ -0.89
HDAC9-229ENST00000622668 ECM1Q16610 540 aa9.51□□□□□ -0.89
HDAC9-229ENST00000622668 CCDC110Q8TBZ0 833 aa9.51□□□□□ -0.89
HDAC9-229ENST00000622668 ATP2A3Q93084 1043 aa9.51□□□□□ -0.89
HDAC9-229ENST00000622668 FAF2Q96CS3 445 aa9.51□□□□□ -0.89
HDAC9-229ENST00000622668 BBS2Q9BXC9 721 aa9.51□□□□□ -0.89
HDAC9-229ENST00000622668 ABHD10Q9NUJ1 306 aa9.51□□□□□ -0.89
HDAC9-229ENST00000622668 STK39Q9UEW8 545 aa9.51□□□□□ -0.89
HDAC9-229ENST00000622668 GJD2Q9UKL4 321 aa9.51□□□□□ -0.89
HDAC9-229ENST00000622668 EFCAB8A8MWE9 144 aa9.5□□□□□ -0.89
HDAC9-229ENST00000622668 PPP1R3GB7ZBB8 358 aa9.5□□□□□ -0.89
HDAC9-229ENST00000622668 ENPP3O14638 875 aa9.5□□□□□ -0.89
HDAC9-229ENST00000622668 MAPK13O15264 365 aa9.5□□□□□ -0.89
HDAC9-229ENST00000622668 ARL2P36404 184 aa9.5□□□□□ -0.89
HDAC9-229ENST00000622668 YWHAZP63104 245 aaKnown RBP9.5□□□□□ -0.89
HDAC9-229ENST00000622668 RETSATQ6NUM9 610 aa9.5□□□□□ -0.89
HDAC9-229ENST00000622668 C16orf59Q7L2K0 433 aa9.5□□□□□ -0.89
HDAC9-229ENST00000622668 DHX40Q8IX18 779 aaKnown RBP9.5□□□□□ -0.89
HDAC9-229ENST00000622668 KLHL23Q8NBE8 558 aa9.5□□□□□ -0.89
HDAC9-229ENST00000622668 PLK2Q9NYY3 685 aa9.5□□□□□ -0.89
HDAC9-229ENST00000622668 PITPNM1O00562 1244 aa9.5□□□□□ -0.89
HDAC9-229ENST00000622668 ZNF263O14978 683 aa9.5□□□□□ -0.89
HDAC9-229ENST00000622668 NDUFS2O75306 463 aa9.5□□□□□ -0.89
HDAC9-229ENST00000622668 PTPN2P17706 415 aa9.5□□□□□ -0.89
HDAC9-229ENST00000622668 MBTD1Q05BQ5 628 aa9.5□□□□□ -0.89
HDAC9-229ENST00000622668 ITPRIPL1Q6GPH6 555 aa9.5□□□□□ -0.89
HDAC9-229ENST00000622668 MFN1Q8IWA4 741 aa9.5□□□□□ -0.89
HDAC9-229ENST00000622668 IFT20Q8IY31 132 aa9.5□□□□□ -0.89
HDAC9-229ENST00000622668 TTC13Q8NBP0 860 aa9.5□□□□□ -0.89
HDAC9-229ENST00000622668 DCUN1D1Q96GG9 259 aa9.5□□□□□ -0.89
HDAC9-229ENST00000622668 C16orf70Q9BSU1 422 aa9.5□□□□□ -0.89
HDAC9-229ENST00000622668 DCLK3Q9C098 648 aa9.5□□□□□ -0.89
HDAC9-229ENST00000622668 RNF39Q9H2S5 420 aa9.5□□□□□ -0.89
HDAC9-229ENST00000622668 AGO3Q9H9G7 860 aaKnown RBP9.5□□□□□ -0.89
HDAC9-229ENST00000622668 ZFP14Q9HCL3 533 aa9.5□□□□□ -0.89
HDAC9-229ENST00000622668 OLA1Q9NTK5 396 aaKnown RBP9.5□□□□□ -0.89
HDAC9-229ENST00000622668 NCKAP1Q9Y2A7 1128 aa9.5□□□□□ -0.89
HDAC9-229ENST00000622668 CCDC78A2IDD5 438 aa9.5□□□□□ -0.89
HDAC9-229ENST00000622668 GRXCR1A8MXD5 290 aa9.5□□□□□ -0.89
HDAC9-229ENST00000622668 CLDN5O00501 218 aa9.5□□□□□ -0.89
HDAC9-229ENST00000622668 TLR5O60602 858 aa9.5□□□□□ -0.89
HDAC9-229ENST00000622668 MAP3K6O95382 1288 aa9.5□□□□□ -0.89
HDAC9-229ENST00000622668 STAMBPO95630 424 aa9.5□□□□□ -0.89
HDAC9-229ENST00000622668 MAGEA10P43363 369 aaPredicted RBP9.5□□□□□ -0.89
HDAC9-229ENST00000622668 CLK2P49760 499 aaKnown RBP9.5□□□□□ -0.89
HDAC9-229ENST00000622668 OXCT1P55809 520 aa9.5□□□□□ -0.89
HDAC9-229ENST00000622668 GTF2H3Q13889 308 aa9.5□□□□□ -0.89
HDAC9-229ENST00000622668 RD3Q7Z3Z2 195 aa9.5□□□□□ -0.89
HDAC9-229ENST00000622668 LRRC8AQ8IWT6 810 aa9.5□□□□□ -0.89
HDAC9-229ENST00000622668 TMEM192Q8IY95 271 aa9.5□□□□□ -0.89
HDAC9-229ENST00000622668 LGI2Q8N0V4 545 aa9.5□□□□□ -0.89
HDAC9-229ENST00000622668 SLC35F6Q8N357 371 aa9.5□□□□□ -0.89
HDAC9-229ENST00000622668 ATP11CQ8NB49 1132 aa9.5□□□□□ -0.89
HDAC9-229ENST00000622668 PDZD8Q8NEN9 1154 aa9.5□□□□□ -0.89
HDAC9-229ENST00000622668 ZNF606Q8WXB4 792 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms