RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 CD48P09326 243 aa21.37■■□□□ 1.01
NEK3-208ENST00000618534 WEE2P0C1S8 567 aa21.37■■□□□ 1.01
NEK3-208ENST00000618534 LINGO3P0C6S8 592 aa21.37■■□□□ 1.01
NEK3-208ENST00000618534 ARL2P36404 184 aa21.37■■□□□ 1.01
NEK3-208ENST00000618534 KHDC1Q4VXA5 237 aaKnown RBP21.37■■□□□ 1.01
NEK3-208ENST00000618534 DSTYKQ6XUX3 929 aa21.37■■□□□ 1.01
NEK3-208ENST00000618534 BBS12Q6ZW61 710 aa21.37■■□□□ 1.01
NEK3-208ENST00000618534 ALKBH8Q96BT7 664 aaKnown RBP21.37■■□□□ 1.01
NEK3-208ENST00000618534 PTCD3Q96EY7 689 aaKnown RBP21.37■■□□□ 1.01
NEK3-208ENST00000618534 UPP2O95045 317 aa21.37■■□□□ 1.01
NEK3-208ENST00000618534 ITGBL1O95965 494 aaPredicted RBP21.37■■□□□ 1.01
NEK3-208ENST00000618534 OATP04181 439 aa21.37■■□□□ 1.01
NEK3-208ENST00000618534 NRLP54845 237 aa21.37■■□□□ 1.01
NEK3-208ENST00000618534 SP2Q02086 613 aa21.37■■□□□ 1.01
NEK3-208ENST00000618534 BRSK2Q8IWQ3 736 aa21.37■■□□□ 1.01
NEK3-208ENST00000618534 ZBED3Q96IU2 234 aaPredicted RBP21.37■■□□□ 1.01
NEK3-208ENST00000618534 ZNF518BQ9C0D4 1074 aa21.37■■□□□ 1.01
NEK3-208ENST00000618534 NIF3L1Q9GZT8 377 aa21.37■■□□□ 1.01
NEK3-208ENST00000618534 DCLRE1BQ9H816 532 aa21.37■■□□□ 1.01
NEK3-208ENST00000618534 FBXO6Q9NRD1 293 aaPredicted RBP21.37■■□□□ 1.01
NEK3-208ENST00000618534 COL11A1P12107 1806 aaPredicted RBP21.36■■□□□ 1.01
NEK3-208ENST00000618534 PARP14Q460N5 1801 aa21.36■■□□□ 1.01
NEK3-208ENST00000618534 LPXNO60711 386 aa21.36■■□□□ 1.01
NEK3-208ENST00000618534 CDH5P33151 784 aaPredicted RBP21.36■■□□□ 1.01
NEK3-208ENST00000618534 GRIK3Q13003 919 aa21.36■■□□□ 1.01
NEK3-208ENST00000618534 PTPN20Q4JDL3 420 aa21.36■■□□□ 1.01
NEK3-208ENST00000618534 NAIF1Q69YI7 327 aaPredicted RBP21.36■■□□□ 1.01
NEK3-208ENST00000618534 DENND1BQ6P3S1 775 aa21.36■■□□□ 1.01
NEK3-208ENST00000618534 ZBTB33Q86T24 672 aa21.36■■□□□ 1.01
NEK3-208ENST00000618534 IGDCC3Q8IVU1 814 aa21.36■■□□□ 1.01
NEK3-208ENST00000618534 KIAA0319LQ8IZA0 1049 aa21.36■■□□□ 1.01
NEK3-208ENST00000618534 KCNN1Q92952 543 aa21.36■■□□□ 1.01
NEK3-208ENST00000618534 CCDC22O60826 627 aa21.36■■□□□ 1.01
NEK3-208ENST00000618534 MT-ND3P03897 115 aa21.36■■□□□ 1.01
NEK3-208ENST00000618534 PDHA1P08559 390 aa21.36■■□□□ 1.01
NEK3-208ENST00000618534 CHRM1P11229 460 aaPredicted RBP21.36■■□□□ 1.01
NEK3-208ENST00000618534 EIF4BP23588 611 aaKnown RBP21.36■■□□□ 1.01
NEK3-208ENST00000618534 KDELR1P24390 212 aa21.36■■□□□ 1.01
NEK3-208ENST00000618534 SERPINB3P29508 390 aa21.36■■□□□ 1.01
NEK3-208ENST00000618534 ARFIP2P53365 341 aa21.36■■□□□ 1.01
NEK3-208ENST00000618534 SESN3P58005 492 aa21.36■■□□□ 1.01
NEK3-208ENST00000618534 BASP1P80723 227 aaKnown RBP21.36■■□□□ 1.01
NEK3-208ENST00000618534 CIAPIN1Q6FI81 312 aa21.36■■□□□ 1.01
NEK3-208ENST00000618534 APBB1IPQ7Z5R6 666 aaPredicted RBP21.36■■□□□ 1.01
NEK3-208ENST00000618534 PDIK1LQ8N165 341 aa21.36■■□□□ 1.01
NEK3-208ENST00000618534 FAM71DQ8N9W8 422 aa21.36■■□□□ 1.01
NEK3-208ENST00000618534 TTC13Q8NBP0 860 aa21.36■■□□□ 1.01
NEK3-208ENST00000618534 SERAC1Q96JX3 654 aa21.36■■□□□ 1.01
NEK3-208ENST00000618534 BTBD10Q9BSF8 475 aa21.36■■□□□ 1.01
NEK3-208ENST00000618534 TMEM120AQ9BXJ8 343 aa21.36■■□□□ 1.01
NEK3-208ENST00000618534 KCNK13Q9HB14 408 aa21.36■■□□□ 1.01
NEK3-208ENST00000618534 ZNF302Q9NR11 478 aa21.36■■□□□ 1.01
NEK3-208ENST00000618534 EFR3BQ9Y2G0 817 aa21.36■■□□□ 1.01
NEK3-208ENST00000618534 PLSCR1O15162 318 aa21.35■■□□□ 1.01
NEK3-208ENST00000618534 PEX19P40855 299 aa21.35■■□□□ 1.01
NEK3-208ENST00000618534 CMPK2Q5EBM0 449 aa21.35■■□□□ 1.01
NEK3-208ENST00000618534 WDR49Q8IV35 697 aa21.35■■□□□ 1.01
NEK3-208ENST00000618534 DNAJC9Q8WXX5 260 aa21.35■■□□□ 1.01
NEK3-208ENST00000618534 SLC7A3Q8WY07 619 aa21.35■■□□□ 1.01
NEK3-208ENST00000618534 SKA1Q96BD8 255 aa21.35■■□□□ 1.01
NEK3-208ENST00000618534 CDHR1Q96JP9 859 aa21.35■■□□□ 1.01
NEK3-208ENST00000618534 TEPSINQ96N21 525 aa21.35■■□□□ 1.01
NEK3-208ENST00000618534 SPATA31C2B4DYI2 1134 aa21.35■■□□□ 1.01
NEK3-208ENST00000618534 LMNAP02545 664 aaKnown RBP21.35■■□□□ 1.01
NEK3-208ENST00000618534 KRT7P08729 469 aa21.35■■□□□ 1.01
NEK3-208ENST00000618534 KRT3P12035 628 aa21.35■■□□□ 1.01
NEK3-208ENST00000618534 PTK7Q13308 1070 aa21.35■■□□□ 1.01
NEK3-208ENST00000618534 CAPSQ13938 189 aa21.35■■□□□ 1.01
NEK3-208ENST00000618534 LMNTD2Q8IXW0 634 aa21.35■■□□□ 1.01
NEK3-208ENST00000618534 FAM111AQ96PZ2 611 aa21.35■■□□□ 1.01
NEK3-208ENST00000618534 CYTH4Q9UIA0 394 aa21.35■■□□□ 1.01
NEK3-208ENST00000618534 PCDHGC3Q9UN70 934 aa21.35■■□□□ 1.01
NEK3-208ENST00000618534 C2orf71A6NGG8 1288 aa21.34■■□□□ 1.01
NEK3-208ENST00000618534 DHRS4L1P0CG22 281 aa21.34■■□□□ 1.01
NEK3-208ENST00000618534 ACADSP16219 412 aa21.34■■□□□ 1.01
NEK3-208ENST00000618534 BGNP21810 368 aa21.34■■□□□ 1.01
NEK3-208ENST00000618534 ELK3P41970 407 aa21.34■■□□□ 1.01
NEK3-208ENST00000618534 ETV4P43268 484 aa21.34■■□□□ 1.01
NEK3-208ENST00000618534 NEK3P51956 506 aa21.34■■□□□ 1.01
NEK3-208ENST00000618534 TSNAXIP1Q2TAA8 658 aa21.34■■□□□ 1.01
NEK3-208ENST00000618534 EMC1Q8N766 993 aa21.34■■□□□ 1.01
NEK3-208ENST00000618534 REPS2Q8NFH8 660 aa21.34■■□□□ 1.01
NEK3-208ENST00000618534 TTC17Q96AE7 1141 aa21.34■■□□□ 1.01
NEK3-208ENST00000618534 NSL1Q96IY1 281 aa21.34■■□□□ 1.01
NEK3-208ENST00000618534 CYTH2Q99418 400 aa21.34■■□□□ 1.01
NEK3-208ENST00000618534 FRMD8P1Q9BZ68 369 aaPredicted RBP21.34■■□□□ 1.01
NEK3-208ENST00000618534 MAFBQ9Y5Q3 323 aaPredicted RBP21.34■■□□□ 1.01
NEK3-208ENST00000618534 GSC2O15499 205 aa21.34■■□□□ 1.01
NEK3-208ENST00000618534 EIF3EP60228 445 aaKnown RBP21.34■■□□□ 1.01
NEK3-208ENST00000618534 CDK16Q00536 496 aa21.34■■□□□ 1.01
NEK3-208ENST00000618534 ZBTB16Q05516 673 aa21.34■■□□□ 1.01
NEK3-208ENST00000618534 PRKD1Q15139 912 aaPredicted RBP21.34■■□□□ 1.01
NEK3-208ENST00000618534 TAF5Q15542 800 aa21.34■■□□□ 1.01
NEK3-208ENST00000618534 TAZQ16635 292 aa21.34■■□□□ 1.01
NEK3-208ENST00000618534 MUM1Q2TAK8 710 aa21.34■■□□□ 1.01
NEK3-208ENST00000618534 RFX6Q8HWS3 928 aa21.34■■□□□ 1.01
NEK3-208ENST00000618534 APOPT1Q96IL0 206 aa21.34■■□□□ 1.01
NEK3-208ENST00000618534 NMRK1Q9NWW6 199 aa21.34■■□□□ 1.01
NEK3-208ENST00000618534 PCSK1NQ9UHG2 260 aa21.34■■□□□ 1.01
NEK3-208ENST00000618534 DPPA5A6NC42 116 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms