RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 TMEFF1Q8IYR6 380 aa4.96□□□□□ -1.62
SNCA-213ENST00000618500 IL17RCQ8NAC3 791 aa4.96□□□□□ -1.62
SNCA-213ENST00000618500 ZFYVE19Q96K21 471 aa4.96□□□□□ -1.62
SNCA-213ENST00000618500 KRTAP3-3Q9BYR6 98 aa4.96□□□□□ -1.62
SNCA-213ENST00000618500 KRTAP3-2Q9BYR7 98 aa4.96□□□□□ -1.62
SNCA-213ENST00000618500 EBF3Q9H4W6 596 aa4.96□□□□□ -1.62
SNCA-213ENST00000618500 FBRSL1Q9HCM7 1045 aaKnown RBP4.96□□□□□ -1.62
SNCA-213ENST00000618500 MARK1Q9P0L2 795 aa4.96□□□□□ -1.62
SNCA-213ENST00000618500 TJP2Q9UDY2 1190 aa4.96□□□□□ -1.62
SNCA-213ENST00000618500 TPX2Q9ULW0 747 aaKnown RBP4.96□□□□□ -1.62
SNCA-213ENST00000618500 C2CD2Q9Y426 696 aa4.96□□□□□ -1.62
SNCA-213ENST00000618500 TMEM131Q92545 1883 aa4.96□□□□□ -1.62
SNCA-213ENST00000618500 I3L4J1 428 aa4.95□□□□□ -1.62
SNCA-213ENST00000618500 PNPLA4P41247 253 aa4.95□□□□□ -1.62
SNCA-213ENST00000618500 PXNP49023 591 aaPredicted RBP4.95□□□□□ -1.62
SNCA-213ENST00000618500 ATXN3P54252 364 aaPredicted RBP4.95□□□□□ -1.62
SNCA-213ENST00000618500 CFHR1Q03591 330 aa4.95□□□□□ -1.62
SNCA-213ENST00000618500 ADCK5Q3MIX3 580 aa4.95□□□□□ -1.62
SNCA-213ENST00000618500 CFAP221Q4G0U5 840 aa4.95□□□□□ -1.62
SNCA-213ENST00000618500 SNX30Q5VWJ9 437 aa4.95□□□□□ -1.62
SNCA-213ENST00000618500 ARMCX5Q6P1M9 558 aa4.95□□□□□ -1.62
SNCA-213ENST00000618500 TMEM92Q6UXU6 159 aa4.95□□□□□ -1.62
SNCA-213ENST00000618500 TRMT1LQ7Z2T5 733 aaKnown RBP4.95□□□□□ -1.62
SNCA-213ENST00000618500 THEM5Q8N1Q8 247 aa4.95□□□□□ -1.62
SNCA-213ENST00000618500 TMEM86AQ8N2M4 240 aa4.95□□□□□ -1.62
SNCA-213ENST00000618500 FSIP1Q8NA03 581 aa4.95□□□□□ -1.62
SNCA-213ENST00000618500 YTHDC1Q96MU7 727 aaKnown RBP4.95□□□□□ -1.62
SNCA-213ENST00000618500 PCDHB5Q9Y5E4 795 aa4.95□□□□□ -1.62
SNCA-213ENST00000618500 ARHGEF35A5YM69 484 aa4.95□□□□□ -1.62
SNCA-213ENST00000618500 MYMKA6NI61 221 aa4.95□□□□□ -1.62
SNCA-213ENST00000618500 K7ERI5 159 aa4.95□□□□□ -1.62
SNCA-213ENST00000618500 NEMFO60524 1076 aa4.95□□□□□ -1.62
SNCA-213ENST00000618500 ADAM23O75077 832 aa4.95□□□□□ -1.62
SNCA-213ENST00000618500 ADH1CP00326 375 aa4.95□□□□□ -1.62
SNCA-213ENST00000618500 CYP17A1P05093 508 aa4.95□□□□□ -1.62
SNCA-213ENST00000618500 MAPTP10636 758 aaKnown RBP4.95□□□□□ -1.62
SNCA-213ENST00000618500 GBP1P32455 592 aa4.95□□□□□ -1.62
SNCA-213ENST00000618500 NCKAP1LP55160 1127 aa4.95□□□□□ -1.62
SNCA-213ENST00000618500 PPP2R3AQ06190 1150 aa4.95□□□□□ -1.62
SNCA-213ENST00000618500 ORC1Q13415 861 aa4.95□□□□□ -1.62
SNCA-213ENST00000618500 SUZ12Q15022 739 aaKnown RBP4.95□□□□□ -1.62
SNCA-213ENST00000618500 ECM1Q16610 540 aa4.95□□□□□ -1.62
SNCA-213ENST00000618500 PTPRNQ16849 979 aa4.95□□□□□ -1.62
SNCA-213ENST00000618500 HYIQ5T013 277 aa4.95□□□□□ -1.62
SNCA-213ENST00000618500 BLOC1S2Q6QNY1 142 aa4.95□□□□□ -1.62
SNCA-213ENST00000618500 USP37Q86T82 979 aa4.95□□□□□ -1.62
SNCA-213ENST00000618500 METTL23Q86XA0 190 aa4.95□□□□□ -1.62
SNCA-213ENST00000618500 CATSPER3Q86XQ3 398 aa4.95□□□□□ -1.62
SNCA-213ENST00000618500 OR10T2Q8NGX3 314 aa4.95□□□□□ -1.62
SNCA-213ENST00000618500 C18orf25Q96B23 403 aaPredicted RBP4.95□□□□□ -1.62
SNCA-213ENST00000618500 LRIG1Q96JA1 1093 aa4.95□□□□□ -1.62
SNCA-213ENST00000618500 LPIN3Q9BQK8 851 aa4.95□□□□□ -1.62
SNCA-213ENST00000618500 ASB7Q9H672 318 aa4.95□□□□□ -1.62
SNCA-213ENST00000618500 FBRSQ9HAH7 460 aa4.95□□□□□ -1.62
SNCA-213ENST00000618500 TBC1D14Q9P2M4 693 aa4.95□□□□□ -1.62
SNCA-213ENST00000618500 TUBGCP4Q9UGJ1 667 aa4.95□□□□□ -1.62
SNCA-213ENST00000618500 CCL26Q9Y258 94 aa4.95□□□□□ -1.62
SNCA-213ENST00000618500 EP300Q09472 2414 aaPredicted RBP4.95□□□□□ -1.62
SNCA-213ENST00000618500 E2F8A0AVK6 867 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 CLEC18AA5D8T8 446 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 ZBTB39O15060 712 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 DXOO77932 396 aaKnown RBP4.94□□□□□ -1.62
SNCA-213ENST00000618500 WISP1O95388 367 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 NFICP08651 508 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 ITPKAP23677 461 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 HOXC13P31276 330 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 MYH10P35580 1976 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 KRT2P35908 639 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 IL12RB1P42701 662 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 MAPK8P45983 427 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 GRIK2Q13002 908 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 GLRA4Q5JXX5 417 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 B4GALNT3Q6L9W6 998 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 CLEC18BQ6UXF7 455 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 LRRC69Q6ZNQ3 347 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 GPR155Q7Z3F1 870 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 SLC41A1Q8IVJ1 513 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 CLEC18CQ8NCF0 446 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 SHROOM3Q8TF72 1996 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 HNRNPLLQ8WVV9 542 aaKnown RBP4.94□□□□□ -1.62
SNCA-213ENST00000618500 BRF1Q92994 677 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 ACBD6Q9BR61 282 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 ZSWIM6Q9HCJ5 1215 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 BRMS1Q9HCU9 246 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 GPRC5CQ9NQ84 441 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 ATG2BQ96BY7 2078 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 PLXNA2O75051 1894 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 GCN1Q92616 2671 aaKnown RBP4.94□□□□□ -1.62
SNCA-213ENST00000618500 SH3BP5O60239 455 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 MED24O75448 989 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 KLF8O95600 359 aaPredicted RBP4.94□□□□□ -1.62
SNCA-213ENST00000618500 GABRG2P18507 467 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 ATP2B1P20020 1258 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 MATKP42679 507 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 PTGER3P43115 390 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 NPTX2P47972 431 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 CSRP3P50461 194 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 ARPP19P56211 112 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 LILRA4P59901 499 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 NOP14P78316 857 aaKnown RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms