RNA–Protein interactions for RNA: ENST00000613947.1

CCL4-201, Transcript of C-C motif chemokine ligand 4, humanhuman

Gene CCL4, Length 1,774 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4-201ENST00000613947 INSL5Q9Y5Q6 135 aa13.66□□□□□ -0.22
CCL4-201ENST00000613947 GTPBP10A4D1E9 387 aaKnown RBP13.66□□□□□ -0.22
CCL4-201ENST00000613947 VGLL3A8MV65 326 aa13.66□□□□□ -0.22
CCL4-201ENST00000613947 CCL16O15467 120 aa13.66□□□□□ -0.22
CCL4-201ENST00000613947 CILPO75339 1184 aa13.66□□□□□ -0.22
CCL4-201ENST00000613947 SOAT2O75908 522 aa13.66□□□□□ -0.22
CCL4-201ENST00000613947 PAPLNO95428 1278 aa13.66□□□□□ -0.22
CCL4-201ENST00000613947 HNRNPA1P09651 372 aaKnown RBP eCLIP13.66□□□□□ -0.22
CCL4-201ENST00000613947 HOXA9P31269 272 aa13.66□□□□□ -0.22
CCL4-201ENST00000613947 BRD3Q15059 726 aa13.66□□□□□ -0.22
CCL4-201ENST00000613947 ZSCAN26Q16670 478 aa13.66□□□□□ -0.22
CCL4-201ENST00000613947 EXOC3L4Q17RC7 722 aa13.66□□□□□ -0.22
CCL4-201ENST00000613947 MDH1BQ5I0G3 518 aa13.66□□□□□ -0.22
CCL4-201ENST00000613947 PHLDB3Q6NSJ2 640 aa13.66□□□□□ -0.22
CCL4-201ENST00000613947 GBP6Q6ZN66 633 aa13.66□□□□□ -0.22
CCL4-201ENST00000613947 RTL10Q7L3V2 364 aa13.66□□□□□ -0.22
CCL4-201ENST00000613947 RSRC2Q7L4I2 434 aaKnown RBP13.66□□□□□ -0.22
CCL4-201ENST00000613947 RRAGAQ7L523 313 aa13.66□□□□□ -0.22
CCL4-201ENST00000613947 ACOT1Q86TX2 421 aa13.66□□□□□ -0.22
CCL4-201ENST00000613947 UNC93AQ86WB7 457 aa13.66□□□□□ -0.22
CCL4-201ENST00000613947 REXO1L1PQ8IX06 675 aa13.66□□□□□ -0.22
CCL4-201ENST00000613947 PPM1KQ8N3J5 372 aa13.66□□□□□ -0.22
CCL4-201ENST00000613947 B3GALNT2Q8NCR0 500 aa13.66□□□□□ -0.22
CCL4-201ENST00000613947 MYCBPAPQ8TBZ2 947 aa13.66□□□□□ -0.22
CCL4-201ENST00000613947 SPPL2BQ8TCT7 592 aa13.66□□□□□ -0.22
CCL4-201ENST00000613947 WHAMMQ8TF30 809 aa13.66□□□□□ -0.22
CCL4-201ENST00000613947 C2orf15Q8WU43 125 aaKnown RBP13.66□□□□□ -0.22
CCL4-201ENST00000613947 SUSD6Q92537 303 aa13.66□□□□□ -0.22
CCL4-201ENST00000613947 KAT5Q92993 513 aa13.66□□□□□ -0.22
CCL4-201ENST00000613947 ASB2Q96Q27 587 aa13.66□□□□□ -0.22
CCL4-201ENST00000613947 ARFGAP3Q9NP61 516 aa13.66□□□□□ -0.22
CCL4-201ENST00000613947 LIMA1Q9UHB6 759 aaKnown RBP13.66□□□□□ -0.22
CCL4-201ENST00000613947 PCDHB5Q9Y5E4 795 aa13.66□□□□□ -0.22
CCL4-201ENST00000613947 LRRC10BA6NIK2 292 aa13.65□□□□□ -0.22
CCL4-201ENST00000613947 IVLP07476 585 aa13.65□□□□□ -0.22
CCL4-201ENST00000613947 IL9P15248 144 aa13.65□□□□□ -0.22
CCL4-201ENST00000613947 CYP2F1P24903 491 aa13.65□□□□□ -0.22
CCL4-201ENST00000613947 PON1P27169 355 aa13.65□□□□□ -0.22
CCL4-201ENST00000613947 OAS2P29728 719 aaKnown RBP13.65□□□□□ -0.22
CCL4-201ENST00000613947 APBA1Q02410 837 aa13.65□□□□□ -0.22
CCL4-201ENST00000613947 TWF1Q12792 350 aa13.65□□□□□ -0.22
CCL4-201ENST00000613947 TUBB2AQ13885 445 aa13.65□□□□□ -0.22
CCL4-201ENST00000613947 MAPRE1Q15691 268 aaKnown RBP13.65□□□□□ -0.22
CCL4-201ENST00000613947 SMAD2Q15796 467 aaKnown RBP13.65□□□□□ -0.22
CCL4-201ENST00000613947 ATAT1Q5SQI0 421 aa13.65□□□□□ -0.22
CCL4-201ENST00000613947 ARHGEF19Q8IW93 802 aa13.65□□□□□ -0.22
CCL4-201ENST00000613947 CRYBG2Q8N1P7 616 aa13.65□□□□□ -0.22
CCL4-201ENST00000613947 LRRN4CLQ8ND94 238 aa13.65□□□□□ -0.22
CCL4-201ENST00000613947 HNRNPLLQ8WVV9 542 aaKnown RBP13.65□□□□□ -0.22
CCL4-201ENST00000613947 SMG7Q92540 1137 aaKnown RBP13.65□□□□□ -0.22
CCL4-201ENST00000613947 MYLPFQ96A32 169 aa13.65□□□□□ -0.22
CCL4-201ENST00000613947 PCED1BQ96HM7 432 aa13.65□□□□□ -0.22
CCL4-201ENST00000613947 TNIP3Q96KP6 325 aa13.65□□□□□ -0.22
CCL4-201ENST00000613947 SEPT5Q99719 369 aaPredicted RBP13.65□□□□□ -0.22
CCL4-201ENST00000613947 TUBB2BQ9BVA1 445 aa13.65□□□□□ -0.22
CCL4-201ENST00000613947 RHOBTB2Q9BYZ6 727 aa13.65□□□□□ -0.22
CCL4-201ENST00000613947 HSFX1Q9UBD0 423 aa13.65□□□□□ -0.22
CCL4-201ENST00000613947 YIPF1Q9Y548 306 aa13.65□□□□□ -0.22
CCL4-201ENST00000613947 C2orf16Q68DN1 1984 aa13.64□□□□□ -0.23
CCL4-201ENST00000613947 TCF20Q9UGU0 1960 aaKnown RBP13.64□□□□□ -0.23
CCL4-201ENST00000613947 ARHGAP6O43182 974 aa13.64□□□□□ -0.23
CCL4-201ENST00000613947 LRG1P02750 347 aa13.64□□□□□ -0.23
CCL4-201ENST00000613947 BMP1P13497 986 aa13.64□□□□□ -0.23
CCL4-201ENST00000613947 TBXAS1P24557 533 aaPredicted RBP13.64□□□□□ -0.23
CCL4-201ENST00000613947 TUFMP49411 452 aaKnown RBP13.64□□□□□ -0.23
CCL4-201ENST00000613947 COPB1P53618 953 aaKnown RBP13.64□□□□□ -0.23
CCL4-201ENST00000613947 CYP27A1Q02318 531 aa13.64□□□□□ -0.23
CCL4-201ENST00000613947 CBX2Q14781 532 aaPredicted RBP13.64□□□□□ -0.23
CCL4-201ENST00000613947 PUS10Q3MIT2 529 aaKnown RBP13.64□□□□□ -0.23
CCL4-201ENST00000613947 MGAT5BQ3V5L5 792 aa13.64□□□□□ -0.23
CCL4-201ENST00000613947 CFAP221Q4G0U5 840 aa13.64□□□□□ -0.23
CCL4-201ENST00000613947 ZNF394Q53GI3 561 aa13.64□□□□□ -0.23
CCL4-201ENST00000613947 C4orf50Q6ZRC1 276 aa13.64□□□□□ -0.23
CCL4-201ENST00000613947 APTXQ7Z2E3 356 aaKnown RBP13.64□□□□□ -0.23
CCL4-201ENST00000613947 SPATA2LQ8IUW3 424 aaPredicted RBP13.64□□□□□ -0.23
CCL4-201ENST00000613947 C12orf29Q8N999 325 aa13.64□□□□□ -0.23
CCL4-201ENST00000613947 ANKRD20A12PQ8NF67 263 aa13.64□□□□□ -0.23
CCL4-201ENST00000613947 NT5C1AQ9BXI3 368 aa13.64□□□□□ -0.23
CCL4-201ENST00000613947 ELOVL4Q9GZR5 314 aa13.64□□□□□ -0.23
CCL4-201ENST00000613947 PIDD1Q9HB75 910 aa13.64□□□□□ -0.23
CCL4-201ENST00000613947 CEP72Q9P209 647 aa13.64□□□□□ -0.23
CCL4-201ENST00000613947 TRIOO75962 3097 aa13.63□□□□□ -0.23
CCL4-201ENST00000613947 CCDC151A5D8V7 595 aa13.63□□□□□ -0.23
CCL4-201ENST00000613947 XYLBO75191 536 aa13.63□□□□□ -0.23
CCL4-201ENST00000613947 HAPLN1P10915 354 aaPredicted RBP13.63□□□□□ -0.23
CCL4-201ENST00000613947 BDNFP23560 247 aa13.63□□□□□ -0.23
CCL4-201ENST00000613947 ALDH1A3P47895 512 aa13.63□□□□□ -0.23
CCL4-201ENST00000613947 FANCCQ00597 558 aa13.63□□□□□ -0.23
CCL4-201ENST00000613947 GCNT1Q02742 428 aa13.63□□□□□ -0.23
CCL4-201ENST00000613947 KCNMA1Q12791 1236 aa13.63□□□□□ -0.23
CCL4-201ENST00000613947 GJB7Q6PEY0 223 aa13.63□□□□□ -0.23
CCL4-201ENST00000613947 CYP26C1Q6V0L0 522 aa13.63□□□□□ -0.23
CCL4-201ENST00000613947 FUBP3Q96I24 572 aaKnown RBP eCLIP13.63□□□□□ -0.23
CCL4-201ENST00000613947 RIPOR3Q96MK2 946 aa13.63□□□□□ -0.23
CCL4-201ENST00000613947 KREMEN1Q96MU8 473 aa13.63□□□□□ -0.23
CCL4-201ENST00000613947 B3GNT5Q9BYG0 378 aa13.63□□□□□ -0.23
CCL4-201ENST00000613947 FAM124BQ9H5Z6 455 aaPredicted RBP13.63□□□□□ -0.23
CCL4-201ENST00000613947 ABCB6Q9NP58 842 aa13.63□□□□□ -0.23
CCL4-201ENST00000613947 UBE2TQ9NPD8 197 aaPredicted RBP13.63□□□□□ -0.23
CCL4-201ENST00000613947 HCFC1R1Q9NWW0 138 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms