RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 PDLIM7Q9NR12 457 aa15.85■□□□□ 0.13
PCDHGB1-202ENST00000611598 FETUBQ9UGM5 382 aa15.85■□□□□ 0.13
PCDHGB1-202ENST00000611598 SEPT9Q9UHD8 586 aaPredicted RBP15.85■□□□□ 0.13
PCDHGB1-202ENST00000611598 AGTPBP1Q9UPW5 1226 aa15.85■□□□□ 0.13
PCDHGB1-202ENST00000611598 CNTN6Q9UQ52 1028 aa15.85■□□□□ 0.13
PCDHGB1-202ENST00000611598 RGPD3A6NKT7 1758 aaPredicted RBP15.85■□□□□ 0.13
PCDHGB1-202ENST00000611598 RGPD4Q7Z3J3 1758 aa15.85■□□□□ 0.13
PCDHGB1-202ENST00000611598 FCHO1O14526 889 aa15.84■□□□□ 0.13
PCDHGB1-202ENST00000611598 CST8O60676 142 aa15.84■□□□□ 0.13
PCDHGB1-202ENST00000611598 ITGBL1O95965 494 aaPredicted RBP15.84■□□□□ 0.13
PCDHGB1-202ENST00000611598 MT-ND3P03897 115 aa15.84■□□□□ 0.13
PCDHGB1-202ENST00000611598 MMP10P09238 476 aa15.84■□□□□ 0.13
PCDHGB1-202ENST00000611598 DHRS4L1P0CG22 281 aa15.84■□□□□ 0.13
PCDHGB1-202ENST00000611598 PTPN7P35236 360 aa15.84■□□□□ 0.13
PCDHGB1-202ENST00000611598 THOC5Q13769 683 aaKnown RBP15.84■□□□□ 0.13
PCDHGB1-202ENST00000611598 SWSAP1Q6NVH7 229 aa15.84■□□□□ 0.13
PCDHGB1-202ENST00000611598 UNC45BQ8IWX7 931 aa15.84■□□□□ 0.13
PCDHGB1-202ENST00000611598 FAM151AQ8WW52 585 aa15.84■□□□□ 0.13
PCDHGB1-202ENST00000611598 IFT43Q96FT9 208 aa15.84■□□□□ 0.13
PCDHGB1-202ENST00000611598 PPP1R12CQ9BZL4 782 aa15.84■□□□□ 0.13
PCDHGB1-202ENST00000611598 PXMP2Q9NR77 195 aa15.84■□□□□ 0.13
PCDHGB1-202ENST00000611598 ZNF70Q9UC06 446 aaPredicted RBP15.84■□□□□ 0.13
PCDHGB1-202ENST00000611598 SCAF8Q9UPN6 1271 aaKnown RBP15.84■□□□□ 0.13
PCDHGB1-202ENST00000611598 DNAJC6O75061 913 aa15.84■□□□□ 0.13
PCDHGB1-202ENST00000611598 CD48P09326 243 aa15.84■□□□□ 0.13
PCDHGB1-202ENST00000611598 PYGBP11216 843 aa15.84■□□□□ 0.13
PCDHGB1-202ENST00000611598 IL1R2P27930 398 aa15.84■□□□□ 0.13
PCDHGB1-202ENST00000611598 NEK3P51956 506 aa15.84■□□□□ 0.13
PCDHGB1-202ENST00000611598 FAAP100Q0VG06 881 aa15.84■□□□□ 0.13
PCDHGB1-202ENST00000611598 PTK7Q13308 1070 aa15.84■□□□□ 0.13
PCDHGB1-202ENST00000611598 PDCD7Q8N8D1 485 aaKnown RBP15.84■□□□□ 0.13
PCDHGB1-202ENST00000611598 SYNCQ9H7C4 482 aa15.84■□□□□ 0.13
PCDHGB1-202ENST00000611598 KRT82Q9NSB4 513 aa15.84■□□□□ 0.13
PCDHGB1-202ENST00000611598 XPO7Q9UIA9 1087 aaKnown RBP15.84■□□□□ 0.13
PCDHGB1-202ENST00000611598 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.84■□□□□ 0.13
PCDHGB1-202ENST00000611598 E7ESA3 106 aa15.83■□□□□ 0.13
PCDHGB1-202ENST00000611598 RARBP10826 455 aa15.83■□□□□ 0.13
PCDHGB1-202ENST00000611598 ENPEPQ07075 957 aa15.83■□□□□ 0.13
PCDHGB1-202ENST00000611598 MDH1BQ5I0G3 518 aa15.83■□□□□ 0.13
PCDHGB1-202ENST00000611598 PPP1R15BQ5SWA1 713 aa15.83■□□□□ 0.13
PCDHGB1-202ENST00000611598 AP1ARQ63HQ0 302 aa15.83■□□□□ 0.13
PCDHGB1-202ENST00000611598 PCGF5Q86SE9 256 aa15.83■□□□□ 0.13
PCDHGB1-202ENST00000611598 WDTC1Q8N5D0 677 aa15.83■□□□□ 0.13
PCDHGB1-202ENST00000611598 ARFGAP1Q8N6T3 406 aa15.83■□□□□ 0.13
PCDHGB1-202ENST00000611598 STMN2Q93045 179 aa15.83■□□□□ 0.13
PCDHGB1-202ENST00000611598 OXNAD1Q96HP4 312 aaPredicted RBP15.83■□□□□ 0.13
PCDHGB1-202ENST00000611598 STX18Q9P2W9 335 aaKnown RBP15.83■□□□□ 0.13
PCDHGB1-202ENST00000611598 TJP2Q9UDY2 1190 aa15.83■□□□□ 0.13
PCDHGB1-202ENST00000611598 MTO1Q9Y2Z2 717 aaKnown RBP15.83■□□□□ 0.13
PCDHGB1-202ENST00000611598 SMAPO00193 183 aa15.83■□□□□ 0.12
PCDHGB1-202ENST00000611598 FAM155BO75949 473 aa15.83■□□□□ 0.12
PCDHGB1-202ENST00000611598 SNUPNO95149 360 aaKnown RBP15.83■□□□□ 0.12
PCDHGB1-202ENST00000611598 EDN1P05305 212 aa15.83■□□□□ 0.12
PCDHGB1-202ENST00000611598 HARSP12081 509 aaKnown RBP15.83■□□□□ 0.12
PCDHGB1-202ENST00000611598 SKIP12755 728 aa15.83■□□□□ 0.12
PCDHGB1-202ENST00000611598 KCNA3P22001 575 aa15.83■□□□□ 0.12
PCDHGB1-202ENST00000611598 ZNF132P52740 706 aa15.83■□□□□ 0.12
PCDHGB1-202ENST00000611598 BASP1P80723 227 aaKnown RBP15.83■□□□□ 0.12
PCDHGB1-202ENST00000611598 NCOA4Q13772 614 aa15.83■□□□□ 0.12
PCDHGB1-202ENST00000611598 KBTBD12Q3ZCT8 623 aa15.83■□□□□ 0.12
PCDHGB1-202ENST00000611598 SLC27A3Q5K4L6 730 aa15.83■□□□□ 0.12
PCDHGB1-202ENST00000611598 CIAPIN1Q6FI81 312 aa15.83■□□□□ 0.12
PCDHGB1-202ENST00000611598 CCDC62Q6P9F0 684 aa15.83■□□□□ 0.12
PCDHGB1-202ENST00000611598 CDHR3Q6ZTQ4 885 aa15.83■□□□□ 0.12
PCDHGB1-202ENST00000611598 CCDC60Q8IWA6 550 aaPredicted RBP15.83■□□□□ 0.12
PCDHGB1-202ENST00000611598 SEPT12Q8IYM1 358 aa15.83■□□□□ 0.12
PCDHGB1-202ENST00000611598 FAM71DQ8N9W8 422 aa15.83■□□□□ 0.12
PCDHGB1-202ENST00000611598 TMEM143Q96AN5 459 aa15.83■□□□□ 0.12
PCDHGB1-202ENST00000611598 ALKBH8Q96BT7 664 aaKnown RBP15.83■□□□□ 0.12
PCDHGB1-202ENST00000611598 MECRQ9BV79 373 aa15.83■□□□□ 0.12
PCDHGB1-202ENST00000611598 VCXQ9H320 206 aa15.83■□□□□ 0.12
PCDHGB1-202ENST00000611598 DGAT1O75907 488 aa15.82■□□□□ 0.12
PCDHGB1-202ENST00000611598 CST3P01034 146 aaPredicted RBP15.82■□□□□ 0.12
PCDHGB1-202ENST00000611598 CALB1P05937 261 aa15.82■□□□□ 0.12
PCDHGB1-202ENST00000611598 PGM1P36871 562 aa15.82■□□□□ 0.12
PCDHGB1-202ENST00000611598 ELK3P41970 407 aa15.82■□□□□ 0.12
PCDHGB1-202ENST00000611598 PRKCEQ02156 737 aa15.82■□□□□ 0.12
PCDHGB1-202ENST00000611598 GHRHRQ02643 423 aa15.82■□□□□ 0.12
PCDHGB1-202ENST00000611598 AP1B1Q10567 949 aa15.82■□□□□ 0.12
PCDHGB1-202ENST00000611598 MTERF2Q49AM1 385 aa15.82■□□□□ 0.12
PCDHGB1-202ENST00000611598 HSF5Q4G112 596 aaPredicted RBP15.82■□□□□ 0.12
PCDHGB1-202ENST00000611598 ARHGEF16Q5VV41 709 aa15.82■□□□□ 0.12
PCDHGB1-202ENST00000611598 CWF19L1Q69YN2 538 aaKnown RBP15.82■□□□□ 0.12
PCDHGB1-202ENST00000611598 GPAT2Q6NUI2 795 aa15.82■□□□□ 0.12
PCDHGB1-202ENST00000611598 POTEAQ6S8J7 498 aa15.82■□□□□ 0.12
PCDHGB1-202ENST00000611598 SH2D5Q6ZV89 423 aa15.82■□□□□ 0.12
PCDHGB1-202ENST00000611598 CHSY1Q86X52 802 aa15.82■□□□□ 0.12
PCDHGB1-202ENST00000611598 TREML1Q86YW5 311 aa15.82■□□□□ 0.12
PCDHGB1-202ENST00000611598 MCPH1Q8NEM0 835 aa15.82■□□□□ 0.12
PCDHGB1-202ENST00000611598 RSAD2Q8WXG1 361 aa15.82■□□□□ 0.12
PCDHGB1-202ENST00000611598 APOPT1Q96IL0 206 aa15.82■□□□□ 0.12
PCDHGB1-202ENST00000611598 TARS2Q9BW92 718 aaKnown RBP15.82■□□□□ 0.12
PCDHGB1-202ENST00000611598 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.82■□□□□ 0.12
PCDHGB1-202ENST00000611598 DDX56Q9NY93 547 aaKnown RBP15.82■□□□□ 0.12
PCDHGB1-202ENST00000611598 SCOCQ9UIL1 159 aa15.82■□□□□ 0.12
PCDHGB1-202ENST00000611598 TCRBV9S1A1TA0A576 114 aa15.82■□□□□ 0.12
PCDHGB1-202ENST00000611598 TBXAS1P24557 533 aaPredicted RBP15.82■□□□□ 0.12
PCDHGB1-202ENST00000611598 RFC1P35251 1148 aaPredicted RBP15.82■□□□□ 0.12
PCDHGB1-202ENST00000611598 SLC25A11Q02978 314 aaKnown RBP15.82■□□□□ 0.12
PCDHGB1-202ENST00000611598 PIGHQ14442 188 aaPredicted RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms