RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 PIP4K2CQ8TBX8 421 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 E2F7Q96AV8 911 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 MTBPQ96DY7 904 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 BORCS6Q96GS4 357 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 CLMNQ96JQ2 1002 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 TBC1D10AQ9BXI6 508 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 TMEM120AQ9BXJ8 343 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 WWP1Q9H0M0 922 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 PCDH9Q9HC56 1237 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 RIPK3Q9Y572 518 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 NUP98P52948 1817 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 TJP1Q07157 1748 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 A8MXQ7 604 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 KBTBD13C9JR72 458 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 CXCL8P10145 99 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 BACE1P56817 501 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 NME3Q13232 169 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 RBBP5Q15291 538 aaKnown RBP7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 NAIF1Q69YI7 327 aaPredicted RBP7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 CATSPER4Q7RTX7 472 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 VSIG10LQ86VR7 867 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 SLC25A41Q8N5S1 370 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 RDM1Q8NG50 284 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 FAM167AQ96KS9 214 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 SLITRK1Q96PX8 696 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 RSAD1Q9HA92 442 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 RNF19AQ9NV58 838 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 HACL1Q9UJ83 578 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 USP18Q9UMW8 372 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 ATXN2Q99700 1313 aaKnown RBP7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 PHLPP1O60346 1717 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 TOGARAM1Q9Y4F4 1720 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 C5orf60A6NFR6 353 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 ATP9BO43861 1147 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 ZNF862O60290 1169 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 ZCCHC18P0CG32 403 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 FDX1P10109 184 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 TXNP10599 105 aaKnown RBP7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 PHKA2P46019 1235 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 GMPSP49915 693 aaPredicted RBP7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 AP3M2P53677 418 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 HIRAP54198 1017 aaPredicted RBP7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 MCL1Q07820 350 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 SLC1A5Q15758 541 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 MFSD5Q6N075 450 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 NPNTQ6UXI9 565 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 PID1Q7Z2X4 250 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 PIGWQ7Z7B1 504 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 TRABD2AQ86V40 505 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 TLK1Q9UKI8 766 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 SHOC2Q9UQ13 582 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 MTO1Q9Y2Z2 717 aaKnown RBP7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 EP400Q96L91 3159 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 MROH7Q68CQ1 1323 aa7.16□□□□□ -1.26
SYNPO2-206ENST00000610556 C2orf71A6NGG8 1288 aa7.16□□□□□ -1.26
SYNPO2-206ENST00000610556 YDJCA8MPS7 323 aa7.16□□□□□ -1.26
SYNPO2-206ENST00000610556 NEMP1O14524 444 aa7.16□□□□□ -1.26
SYNPO2-206ENST00000610556 PEX10O60683 326 aa7.16□□□□□ -1.26
SYNPO2-206ENST00000610556 PGK2P07205 417 aa7.16□□□□□ -1.26
SYNPO2-206ENST00000610556 KCNA3P22001 575 aa7.16□□□□□ -1.26
SYNPO2-206ENST00000610556 NCKAP1LP55160 1127 aa7.16□□□□□ -1.26
SYNPO2-206ENST00000610556 NFIL3Q16649 462 aa7.16□□□□□ -1.26
SYNPO2-206ENST00000610556 KBTBD12Q3ZCT8 623 aa7.16□□□□□ -1.26
SYNPO2-206ENST00000610556 EFCAB12Q6NXP0 572 aa7.16□□□□□ -1.26
SYNPO2-206ENST00000610556 DENND1BQ6P3S1 775 aa7.16□□□□□ -1.26
SYNPO2-206ENST00000610556 VSTM1Q6UX27 236 aa7.16□□□□□ -1.26
SYNPO2-206ENST00000610556 ZCCHC23Q6ZST2 131 aa7.16□□□□□ -1.26
SYNPO2-206ENST00000610556 ZC3H3Q8IXZ2 948 aaKnown RBP7.16□□□□□ -1.26
SYNPO2-206ENST00000610556 MCUQ8NE86 351 aa7.16□□□□□ -1.26
SYNPO2-206ENST00000610556 TTC8Q8TAM2 541 aa7.16□□□□□ -1.26
SYNPO2-206ENST00000610556 RXFP2Q8WXD0 754 aa7.16□□□□□ -1.26
SYNPO2-206ENST00000610556 MIEF2Q96C03 454 aa7.16□□□□□ -1.26
SYNPO2-206ENST00000610556 PGBD4Q96DM1 585 aa7.16□□□□□ -1.26
SYNPO2-206ENST00000610556 DDX27Q96GQ7 796 aaKnown RBP7.16□□□□□ -1.26
SYNPO2-206ENST00000610556 HPDLQ96IR7 371 aa7.16□□□□□ -1.26
SYNPO2-206ENST00000610556 MRIQ9BWK5 157 aa7.16□□□□□ -1.26
SYNPO2-206ENST00000610556 CEP41Q9BYV8 373 aa7.16□□□□□ -1.26
SYNPO2-206ENST00000610556 GPR88Q9GZN0 384 aa7.16□□□□□ -1.26
SYNPO2-206ENST00000610556 C2orf40Q9H1Z8 148 aa7.16□□□□□ -1.26
SYNPO2-206ENST00000610556 A1CFQ9NQ94 594 aaKnown RBP7.16□□□□□ -1.26
SYNPO2-206ENST00000610556 FBXO6Q9NRD1 293 aaPredicted RBP7.16□□□□□ -1.26
SYNPO2-206ENST00000610556 WDR35Q9P2L0 1181 aa7.16□□□□□ -1.26
SYNPO2-206ENST00000610556 SLC24A2Q9UI40 661 aa7.16□□□□□ -1.26
SYNPO2-206ENST00000610556 TAF1P21675 1872 aa7.16□□□□□ -1.26
SYNPO2-206ENST00000610556 UBR2Q8IWV8 1755 aa7.16□□□□□ -1.26
SYNPO2-206ENST00000610556 CST3P01034 146 aaPredicted RBP7.16□□□□□ -1.26
SYNPO2-206ENST00000610556 GPD1P21695 349 aa7.16□□□□□ -1.26
SYNPO2-206ENST00000610556 GLRA2P23416 452 aa7.16□□□□□ -1.26
SYNPO2-206ENST00000610556 PTPN4P29074 926 aa7.16□□□□□ -1.26
SYNPO2-206ENST00000610556 MIPP30301 263 aa7.16□□□□□ -1.26
SYNPO2-206ENST00000610556 FOXN2P32314 431 aa7.16□□□□□ -1.26
SYNPO2-206ENST00000610556 AQP5P55064 265 aa7.16□□□□□ -1.26
SYNPO2-206ENST00000610556 AP2B1P63010 937 aa7.16□□□□□ -1.26
SYNPO2-206ENST00000610556 MMRN1Q13201 1228 aa7.16□□□□□ -1.26
SYNPO2-206ENST00000610556 CUL3Q13618 768 aa7.16□□□□□ -1.26
SYNPO2-206ENST00000610556 RASA2Q15283 850 aa7.16□□□□□ -1.26
SYNPO2-206ENST00000610556 MMEL1Q495T6 779 aa7.16□□□□□ -1.26
SYNPO2-206ENST00000610556 NIPA1Q7RTP0 329 aa7.16□□□□□ -1.26
SYNPO2-206ENST00000610556 CEP120Q8N960 986 aa7.16□□□□□ -1.26
SYNPO2-206ENST00000610556 GLIS1Q8NBF1 620 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms