RNA–Protein interactions for RNA: ENST00000608254.1

PTCHD1-AS-202, Transcript of PTCHD1 antisense RNA (head to head), humanhuman

TSL 4 BASIC

Gene PTCHD1-AS, Length 557 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-AS-202ENST00000608254 PUS10Q3MIT2 529 aaKnown RBP12.72□□□□□ -0.37
PTCHD1-AS-202ENST00000608254 LEXMQ3ZCV2 418 aa12.72□□□□□ -0.37
PTCHD1-AS-202ENST00000608254 ATAT1Q5SQI0 421 aa12.72□□□□□ -0.37
PTCHD1-AS-202ENST00000608254 LCLAT1Q6UWP7 414 aa12.72□□□□□ -0.37
PTCHD1-AS-202ENST00000608254 ITIH5Q86UX2 942 aa12.72□□□□□ -0.37
PTCHD1-AS-202ENST00000608254 FMNL3Q8IVF7 1028 aa12.72□□□□□ -0.37
PTCHD1-AS-202ENST00000608254 SCN4BQ8IWT1 228 aa12.72□□□□□ -0.37
PTCHD1-AS-202ENST00000608254 ANKRD52Q8NB46 1076 aa12.72□□□□□ -0.37
PTCHD1-AS-202ENST00000608254 SMRP1Q8NCR6 262 aa12.72□□□□□ -0.37
PTCHD1-AS-202ENST00000608254 TFAP2BQ92481 460 aa12.72□□□□□ -0.37
PTCHD1-AS-202ENST00000608254 SMG7Q92540 1137 aaKnown RBP12.72□□□□□ -0.37
PTCHD1-AS-202ENST00000608254 SPATA17Q96L03 361 aa12.72□□□□□ -0.37
PTCHD1-AS-202ENST00000608254 ZNF512Q96ME7 567 aaPredicted RBP12.72□□□□□ -0.37
PTCHD1-AS-202ENST00000608254 TRIM5Q9C035 493 aa12.72□□□□□ -0.37
PTCHD1-AS-202ENST00000608254 PIDD1Q9HB75 910 aa12.72□□□□□ -0.37
PTCHD1-AS-202ENST00000608254 CSNK1G1Q9HCP0 422 aa12.72□□□□□ -0.37
PTCHD1-AS-202ENST00000608254 DMAP1Q9NPF5 467 aaPredicted RBP12.72□□□□□ -0.37
PTCHD1-AS-202ENST00000608254 MYO6Q9UM54 1294 aa12.72□□□□□ -0.37
PTCHD1-AS-202ENST00000608254 ITIH6Q6UXX5 1313 aa12.71□□□□□ -0.37
PTCHD1-AS-202ENST00000608254 A0A1W2PQJ5 194 aa12.71□□□□□ -0.37
PTCHD1-AS-202ENST00000608254 O00370 1275 aa12.71□□□□□ -0.37
PTCHD1-AS-202ENST00000608254 AP5Z1O43299 807 aa12.71□□□□□ -0.37
PTCHD1-AS-202ENST00000608254 MED7O43513 233 aa12.71□□□□□ -0.37
PTCHD1-AS-202ENST00000608254 PTPN2P17706 415 aa12.71□□□□□ -0.37
PTCHD1-AS-202ENST00000608254 ATF6P18850 670 aa12.71□□□□□ -0.37
PTCHD1-AS-202ENST00000608254 GNA15P30679 374 aa12.71□□□□□ -0.37
PTCHD1-AS-202ENST00000608254 CLCN1P35523 988 aa12.71□□□□□ -0.37
PTCHD1-AS-202ENST00000608254 SOX5P35711 763 aa12.71□□□□□ -0.37
PTCHD1-AS-202ENST00000608254 MTHFRP42898 656 aa12.71□□□□□ -0.37
PTCHD1-AS-202ENST00000608254 CACNA2D1P54289 1103 aa12.71□□□□□ -0.37
PTCHD1-AS-202ENST00000608254 SLC8A3P57103 927 aa12.71□□□□□ -0.37
PTCHD1-AS-202ENST00000608254 SMAD4Q13485 552 aaKnown RBP12.71□□□□□ -0.37
PTCHD1-AS-202ENST00000608254 CLUL1Q15846 466 aa12.71□□□□□ -0.37
PTCHD1-AS-202ENST00000608254 MEA1Q16626 185 aa12.71□□□□□ -0.37
PTCHD1-AS-202ENST00000608254 DDR2Q16832 855 aa12.71□□□□□ -0.37
PTCHD1-AS-202ENST00000608254 PSMG2Q969U7 264 aa12.71□□□□□ -0.37
PTCHD1-AS-202ENST00000608254 RIPOR3Q96MK2 946 aa12.71□□□□□ -0.37
PTCHD1-AS-202ENST00000608254 SMOQ99835 787 aa12.71□□□□□ -0.37
PTCHD1-AS-202ENST00000608254 APOL5Q9BWW9 433 aa12.71□□□□□ -0.37
PTCHD1-AS-202ENST00000608254 DUSP16Q9BY84 665 aa12.71□□□□□ -0.37
PTCHD1-AS-202ENST00000608254 UBXN6Q9BZV1 441 aa12.71□□□□□ -0.37
PTCHD1-AS-202ENST00000608254 TTYH3Q9C0H2 523 aa12.71□□□□□ -0.37
PTCHD1-AS-202ENST00000608254 KRT82Q9NSB4 513 aa12.71□□□□□ -0.37
PTCHD1-AS-202ENST00000608254 HESX1Q9UBX0 185 aa12.71□□□□□ -0.37
PTCHD1-AS-202ENST00000608254 TSPAN16Q9UKR8 245 aa12.71□□□□□ -0.37
PTCHD1-AS-202ENST00000608254 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.71□□□□□ -0.37
PTCHD1-AS-202ENST00000608254 F8VP50 259 aa12.7□□□□□ -0.38
PTCHD1-AS-202ENST00000608254 CCDC172P0C7W6 258 aa12.7□□□□□ -0.38
PTCHD1-AS-202ENST00000608254 PNMA6AP0CW24 399 aaPredicted RBP12.7□□□□□ -0.38
PTCHD1-AS-202ENST00000608254 CSH1P0DML2 217 aa12.7□□□□□ -0.38
PTCHD1-AS-202ENST00000608254 CSH2P0DML3 217 aa12.7□□□□□ -0.38
PTCHD1-AS-202ENST00000608254 NPR3P17342 541 aa12.7□□□□□ -0.38
PTCHD1-AS-202ENST00000608254 BRD2P25440 801 aaKnown RBP12.7□□□□□ -0.38
PTCHD1-AS-202ENST00000608254 GPR15P49685 360 aa12.7□□□□□ -0.38
PTCHD1-AS-202ENST00000608254 MAP3K7CLP57077 242 aa12.7□□□□□ -0.38
PTCHD1-AS-202ENST00000608254 TAF12Q16514 161 aa12.7□□□□□ -0.38
PTCHD1-AS-202ENST00000608254 AAK1Q2M2I8 961 aa12.7□□□□□ -0.38
PTCHD1-AS-202ENST00000608254 GOLGA7BQ2TAP0 167 aa12.7□□□□□ -0.38
PTCHD1-AS-202ENST00000608254 SPECC1LQ69YQ0 1117 aa12.7□□□□□ -0.38
PTCHD1-AS-202ENST00000608254 CLEC20AQ6ZU45 233 aa12.7□□□□□ -0.38
PTCHD1-AS-202ENST00000608254 DNAJB7Q7Z6W7 309 aaPredicted RBP12.7□□□□□ -0.38
PTCHD1-AS-202ENST00000608254 VSTM4Q8IW00 320 aa12.7□□□□□ -0.38
PTCHD1-AS-202ENST00000608254 LEMD2Q8NC56 503 aa12.7□□□□□ -0.38
PTCHD1-AS-202ENST00000608254 GIPC2Q8TF65 315 aa12.7□□□□□ -0.38
PTCHD1-AS-202ENST00000608254 ZNF606Q8WXB4 792 aa12.7□□□□□ -0.38
PTCHD1-AS-202ENST00000608254 SUSD6Q92537 303 aa12.7□□□□□ -0.38
PTCHD1-AS-202ENST00000608254 BAP1Q92560 729 aa12.7□□□□□ -0.38
PTCHD1-AS-202ENST00000608254 NECTIN4Q96NY8 510 aa12.7□□□□□ -0.38
PTCHD1-AS-202ENST00000608254 KCNK16Q96T55 309 aa12.7□□□□□ -0.38
PTCHD1-AS-202ENST00000608254 ZSWIM1Q9BR11 485 aa12.7□□□□□ -0.38
PTCHD1-AS-202ENST00000608254 PNPLA8Q9NP80 782 aa12.7□□□□□ -0.38
PTCHD1-AS-202ENST00000608254 AVENQ9NQS1 362 aaPredicted RBP12.7□□□□□ -0.38
PTCHD1-AS-202ENST00000608254 PRDM6Q9NQX0 595 aa12.7□□□□□ -0.38
PTCHD1-AS-202ENST00000608254 TMEM30AQ9NV96 361 aa12.7□□□□□ -0.38
PTCHD1-AS-202ENST00000608254 EHD2Q9NZN4 543 aa12.7□□□□□ -0.38
PTCHD1-AS-202ENST00000608254 THEGQ9P2T0 379 aa12.7□□□□□ -0.38
PTCHD1-AS-202ENST00000608254 DNMT3BQ9UBC3 853 aaKnown RBP12.7□□□□□ -0.38
PTCHD1-AS-202ENST00000608254 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.7□□□□□ -0.38
PTCHD1-AS-202ENST00000608254 FAM50BQ9Y247 325 aa12.7□□□□□ -0.38
PTCHD1-AS-202ENST00000608254 ATG2AQ2TAZ0 1938 aa12.69□□□□□ -0.38
PTCHD1-AS-202ENST00000608254 GRXCR2A6NFK2 248 aa12.69□□□□□ -0.38
PTCHD1-AS-202ENST00000608254 SLC38A8A6NNN8 435 aa12.69□□□□□ -0.38
PTCHD1-AS-202ENST00000608254 THAP12O43422 761 aa12.69□□□□□ -0.38
PTCHD1-AS-202ENST00000608254 MBTPS2O43462 519 aa12.69□□□□□ -0.38
PTCHD1-AS-202ENST00000608254 BEST1O76090 585 aa12.69□□□□□ -0.38
PTCHD1-AS-202ENST00000608254 GFPT2O94808 682 aa12.69□□□□□ -0.38
PTCHD1-AS-202ENST00000608254 MICAL2O94851 1124 aa12.69□□□□□ -0.38
PTCHD1-AS-202ENST00000608254 FGF19O95750 216 aa12.69□□□□□ -0.38
PTCHD1-AS-202ENST00000608254 CALCAP01258 141 aa12.69□□□□□ -0.38
PTCHD1-AS-202ENST00000608254 SETSIPP0DME0 302 aa12.69□□□□□ -0.38
PTCHD1-AS-202ENST00000608254 CYP11B1P15538 503 aa12.69□□□□□ -0.38
PTCHD1-AS-202ENST00000608254 BCAT1P54687 386 aa12.69□□□□□ -0.38
PTCHD1-AS-202ENST00000608254 EPHA5P54756 1037 aa12.69□□□□□ -0.38
PTCHD1-AS-202ENST00000608254 BST2Q10589 180 aaKnown RBP12.69□□□□□ -0.38
PTCHD1-AS-202ENST00000608254 PKDCCQ504Y2 493 aa12.69□□□□□ -0.38
PTCHD1-AS-202ENST00000608254 SDHAF4Q5VUM1 108 aa12.69□□□□□ -0.38
PTCHD1-AS-202ENST00000608254 DENND5BQ6ZUT9 1274 aa12.69□□□□□ -0.38
PTCHD1-AS-202ENST00000608254 GRASPQ7Z6J2 395 aaPredicted RBP12.69□□□□□ -0.38
PTCHD1-AS-202ENST00000608254 SLC47A2Q86VL8 602 aa12.69□□□□□ -0.38
PTCHD1-AS-202ENST00000608254 TTC30AQ86WT1 665 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms