RNA–Protein interactions for RNA: ENST00000603722.1

TUBE1-206, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-206ENST00000603722 BECN1Q14457 450 aa17.48■□□□□ 0.39
TUBE1-206ENST00000603722 TSSK4Q6SA08 328 aa17.48■□□□□ 0.39
TUBE1-206ENST00000603722 VSTM1Q6UX27 236 aa17.48■□□□□ 0.39
TUBE1-206ENST00000603722 SCARA5Q6ZMJ2 495 aa17.48■□□□□ 0.39
TUBE1-206ENST00000603722 ADSSL1Q8N142 457 aa17.48■□□□□ 0.39
TUBE1-206ENST00000603722 RIN3Q8TB24 985 aa17.48■□□□□ 0.39
TUBE1-206ENST00000603722 TMEM174Q8WUU8 243 aa17.48■□□□□ 0.39
TUBE1-206ENST00000603722 ELMO3Q96BJ8 720 aa17.48■□□□□ 0.39
TUBE1-206ENST00000603722 CHRDQ9H2X0 955 aa17.48■□□□□ 0.39
TUBE1-206ENST00000603722 SMYD3Q9H7B4 428 aa17.48■□□□□ 0.39
TUBE1-206ENST00000603722 TDP1Q9NUW8 608 aa17.48■□□□□ 0.39
TUBE1-206ENST00000603722 MAPK8IP1Q9UQF2 711 aa17.48■□□□□ 0.39
TUBE1-206ENST00000603722 KIF20AO95235 890 aa17.47■□□□□ 0.39
TUBE1-206ENST00000603722 LMNAP02545 664 aaKnown RBP17.47■□□□□ 0.39
TUBE1-206ENST00000603722 C4BPAP04003 597 aaKnown RBP17.47■□□□□ 0.39
TUBE1-206ENST00000603722 CHRNB1P11230 501 aa17.47■□□□□ 0.39
TUBE1-206ENST00000603722 ANXA13P27216 316 aa17.47■□□□□ 0.39
TUBE1-206ENST00000603722 RAP1GAPP47736 663 aa17.47■□□□□ 0.39
TUBE1-206ENST00000603722 ZNF528Q3MIS6 628 aa17.47■□□□□ 0.39
TUBE1-206ENST00000603722 C1orf228Q6PIY5 440 aa17.47■□□□□ 0.39
TUBE1-206ENST00000603722 TXNDC11Q6PKC3 985 aa17.47■□□□□ 0.39
TUBE1-206ENST00000603722 TTC16Q8NEE8 873 aa17.47■□□□□ 0.39
TUBE1-206ENST00000603722 SPATA17Q96L03 361 aa17.47■□□□□ 0.39
TUBE1-206ENST00000603722 VRTNQ9H8Y1 702 aa17.47■□□□□ 0.39
TUBE1-206ENST00000603722 KIF9Q9HAQ2 790 aa17.47■□□□□ 0.39
TUBE1-206ENST00000603722 PRMT8Q9NR22 394 aaPredicted RBP17.47■□□□□ 0.39
TUBE1-206ENST00000603722 FRMD4BQ9Y2L6 1034 aa17.47■□□□□ 0.39
TUBE1-206ENST00000603722 ZFHX2Q9C0A1 2572 aaPredicted RBP17.46■□□□□ 0.39
TUBE1-206ENST00000603722 F8VP50 259 aa17.46■□□□□ 0.39
TUBE1-206ENST00000603722 TRIM66O15016 1216 aa17.46■□□□□ 0.39
TUBE1-206ENST00000603722 ZNF202O95125 648 aa17.46■□□□□ 0.39
TUBE1-206ENST00000603722 VNN1O95497 513 aa17.46■□□□□ 0.39
TUBE1-206ENST00000603722 CKMP06732 381 aa17.46■□□□□ 0.39
TUBE1-206ENST00000603722 FAM163BP0C2L3 166 aa17.46■□□□□ 0.39
TUBE1-206ENST00000603722 PTPN1P18031 435 aaKnown RBP17.46■□□□□ 0.39
TUBE1-206ENST00000603722 NR2F2P24468 414 aa17.46■□□□□ 0.39
TUBE1-206ENST00000603722 CDH8P55286 799 aa17.46■□□□□ 0.39
TUBE1-206ENST00000603722 ZNF667Q5HYK9 610 aa17.46■□□□□ 0.39
TUBE1-206ENST00000603722 TRIM68Q6AZZ1 485 aa17.46■□□□□ 0.39
TUBE1-206ENST00000603722 DENND5BQ6ZUT9 1274 aa17.46■□□□□ 0.39
TUBE1-206ENST00000603722 RALGPS2Q86X27 583 aaPredicted RBP17.46■□□□□ 0.39
TUBE1-206ENST00000603722 B3GALNT2Q8NCR0 500 aa17.46■□□□□ 0.39
TUBE1-206ENST00000603722 ZNF518BQ9C0D4 1074 aa17.46■□□□□ 0.39
TUBE1-206ENST00000603722 SEMA4AQ9H3S1 761 aa17.46■□□□□ 0.39
TUBE1-206ENST00000603722 GKN1Q9NS71 199 aa17.46■□□□□ 0.39
TUBE1-206ENST00000603722 RBM12Q9NTZ6 932 aaKnown RBP17.46■□□□□ 0.39
TUBE1-206ENST00000603722 TRAF3IP3Q9Y228 551 aa17.46■□□□□ 0.39
TUBE1-206ENST00000603722 TRAV19A0A0A6YYK7 116 aa17.45■□□□□ 0.38
TUBE1-206ENST00000603722 C2orf78A6NCI8 922 aa17.45■□□□□ 0.38
TUBE1-206ENST00000603722 SOBPA7XYQ1 873 aa17.45■□□□□ 0.38
TUBE1-206ENST00000603722 CLDN5O00501 218 aa17.45■□□□□ 0.38
TUBE1-206ENST00000603722 KINO60870 393 aaKnown RBP17.45■□□□□ 0.38
TUBE1-206ENST00000603722 CACNA2D1P54289 1103 aa17.45■□□□□ 0.38
TUBE1-206ENST00000603722 USP46P62068 366 aa17.45■□□□□ 0.38
TUBE1-206ENST00000603722 LRRC32Q14392 662 aa17.45■□□□□ 0.38
TUBE1-206ENST00000603722 ZNF268Q14587 947 aaPredicted RBP17.45■□□□□ 0.38
TUBE1-206ENST00000603722 PON2Q15165 354 aa17.45■□□□□ 0.38
TUBE1-206ENST00000603722 ITPRIPL2Q3MIP1 535 aa17.45■□□□□ 0.38
TUBE1-206ENST00000603722 WDR44Q5JSH3 913 aa17.45■□□□□ 0.38
TUBE1-206ENST00000603722 CC2D1AQ6P1N0 951 aaPredicted RBP17.45■□□□□ 0.38
TUBE1-206ENST00000603722 TMC2Q8TDI7 906 aa17.45■□□□□ 0.38
TUBE1-206ENST00000603722 SLC22A12Q96S37 553 aa17.45■□□□□ 0.38
TUBE1-206ENST00000603722 CYP2S1Q96SQ9 504 aa17.45■□□□□ 0.38
TUBE1-206ENST00000603722 FAM83CQ9BQN1 747 aa17.45■□□□□ 0.38
TUBE1-206ENST00000603722 IER2Q9BTL4 223 aa17.45■□□□□ 0.38
TUBE1-206ENST00000603722 ELOVL4Q9GZR5 314 aa17.45■□□□□ 0.38
TUBE1-206ENST00000603722 SDCBP2Q9H190 292 aa17.45■□□□□ 0.38
TUBE1-206ENST00000603722 EBF3Q9H4W6 596 aa17.45■□□□□ 0.38
TUBE1-206ENST00000603722 HPS4Q9NQG7 708 aa17.45■□□□□ 0.38
TUBE1-206ENST00000603722 AKAP3O75969 853 aa17.44■□□□□ 0.38
TUBE1-206ENST00000603722 USP17L7P0C7H9 530 aa17.44■□□□□ 0.38
TUBE1-206ENST00000603722 ARSAP15289 507 aa17.44■□□□□ 0.38
TUBE1-206ENST00000603722 PIK3CAP42336 1068 aa17.44■□□□□ 0.38
TUBE1-206ENST00000603722 FAM160A1Q05DH4 1040 aa17.44■□□□□ 0.38
TUBE1-206ENST00000603722 GAS6Q14393 721 aa17.44■□□□□ 0.38
TUBE1-206ENST00000603722 KCNB1Q14721 858 aa17.44■□□□□ 0.38
TUBE1-206ENST00000603722 MTF1Q14872 753 aa17.44■□□□□ 0.38
TUBE1-206ENST00000603722 ZACNQ401N2 412 aa17.44■□□□□ 0.38
TUBE1-206ENST00000603722 Q6ZS52 159 aa17.44■□□□□ 0.38
TUBE1-206ENST00000603722 SV2AQ7L0J3 742 aa17.44■□□□□ 0.38
TUBE1-206ENST00000603722 GUF1Q8N442 669 aaKnown RBP17.44■□□□□ 0.38
TUBE1-206ENST00000603722 ARL14EPQ8N8R7 260 aaPredicted RBP17.44■□□□□ 0.38
TUBE1-206ENST00000603722 C8orf48Q96LL4 319 aa17.44■□□□□ 0.38
TUBE1-206ENST00000603722 CEP295NLQ96MC4 621 aa17.44■□□□□ 0.38
TUBE1-206ENST00000603722 B3GNT5Q9BYG0 378 aa17.44■□□□□ 0.38
TUBE1-206ENST00000603722 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.44■□□□□ 0.38
TUBE1-206ENST00000603722 TMEM30AQ9NV96 361 aa17.44■□□□□ 0.38
TUBE1-206ENST00000603722 GCNT4Q9P109 453 aa17.44■□□□□ 0.38
TUBE1-206ENST00000603722 PCDHGA2Q9Y5H1 932 aa17.44■□□□□ 0.38
TUBE1-206ENST00000603722 TCHHQ07283 1943 aa17.43■□□□□ 0.38
TUBE1-206ENST00000603722 OTOL1A6NHN0 477 aaPredicted RBP17.43■□□□□ 0.38
TUBE1-206ENST00000603722 TRIM49P0CI25 452 aa17.43■□□□□ 0.38
TUBE1-206ENST00000603722 TRIM49CP0CI26 452 aa17.43■□□□□ 0.38
TUBE1-206ENST00000603722 P4HA1P13674 534 aa17.43■□□□□ 0.38
TUBE1-206ENST00000603722 CCR3P51677 355 aa17.43■□□□□ 0.38
TUBE1-206ENST00000603722 VAMP7P51809 220 aa17.43■□□□□ 0.38
TUBE1-206ENST00000603722 SATB1Q01826 763 aa17.43■□□□□ 0.38
TUBE1-206ENST00000603722 USP4Q13107 963 aa17.43■□□□□ 0.38
TUBE1-206ENST00000603722 PNOCQ13519 176 aa17.43■□□□□ 0.38
TUBE1-206ENST00000603722 RUNX3Q13761 415 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms