RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 TRMT5Q32P41 509 aaKnown RBP9.96□□□□□ -0.81
CSMD1-217ENST00000602723 SRBD1Q8N5C6 995 aaKnown RBP9.96□□□□□ -0.81
CSMD1-217ENST00000602723 DCLRE1BQ9H816 532 aa9.96□□□□□ -0.81
CSMD1-217ENST00000602723 TMEM8AQ9HCN3 771 aa9.96□□□□□ -0.81
CSMD1-217ENST00000602723 ADAM30Q9UKF2 790 aa9.96□□□□□ -0.81
CSMD1-217ENST00000602723 RNF112Q9ULX5 631 aa9.96□□□□□ -0.81
CSMD1-217ENST00000602723 SLC30A1Q9Y6M5 507 aa9.96□□□□□ -0.81
CSMD1-217ENST00000602723 SOAT2O75908 522 aa9.96□□□□□ -0.81
CSMD1-217ENST00000602723 TFE3P19532 575 aaPredicted RBP9.96□□□□□ -0.81
CSMD1-217ENST00000602723 AGAP9Q5VTM2 703 aa9.96□□□□□ -0.81
CSMD1-217ENST00000602723 LRRC34Q8IZ02 419 aa9.96□□□□□ -0.81
CSMD1-217ENST00000602723 ANKRD27Q96NW4 1050 aa9.96□□□□□ -0.81
CSMD1-217ENST00000602723 IGSF9BQ9UPX0 1349 aa9.96□□□□□ -0.82
CSMD1-217ENST00000602723 ASNA1O43681 348 aa9.96□□□□□ -0.82
CSMD1-217ENST00000602723 AVPR1AP37288 418 aa9.96□□□□□ -0.82
CSMD1-217ENST00000602723 OVGP1Q12889 678 aa9.96□□□□□ -0.82
CSMD1-217ENST00000602723 MIER2Q8N344 545 aa9.96□□□□□ -0.82
CSMD1-217ENST00000602723 AGAP1Q9UPQ3 857 aa9.96□□□□□ -0.82
CSMD1-217ENST00000602723 SNX9Q9Y5X1 595 aa9.96□□□□□ -0.82
CSMD1-217ENST00000602723 COL15A1P39059 1388 aa9.96□□□□□ -0.82
CSMD1-217ENST00000602723 ERBB3P21860 1342 aa9.96□□□□□ -0.82
CSMD1-217ENST00000602723 NBPF26B4DH59 902 aa9.96□□□□□ -0.82
CSMD1-217ENST00000602723 NR5A2O00482 541 aa9.96□□□□□ -0.82
CSMD1-217ENST00000602723 CST8O60676 142 aa9.96□□□□□ -0.82
CSMD1-217ENST00000602723 HLFQ16534 295 aa9.96□□□□□ -0.82
CSMD1-217ENST00000602723 ZRANB3Q5FWF4 1079 aa9.96□□□□□ -0.82
CSMD1-217ENST00000602723 KCNV1Q6PIU1 500 aa9.96□□□□□ -0.82
CSMD1-217ENST00000602723 OTOAQ7RTW8 1153 aa9.96□□□□□ -0.82
CSMD1-217ENST00000602723 NBPF15Q8N660 670 aa9.96□□□□□ -0.82
CSMD1-217ENST00000602723 C10orf53Q8N6V4 93 aa9.96□□□□□ -0.82
CSMD1-217ENST00000602723 PABPC3Q9H361 631 aaKnown RBP9.96□□□□□ -0.82
CSMD1-217ENST00000602723 SERHL2Q9H4I8 314 aa9.96□□□□□ -0.82
CSMD1-217ENST00000602723 SERHLQ9NQF3 203 aa9.96□□□□□ -0.82
CSMD1-217ENST00000602723 LSM7Q9UK45 103 aaKnown RBP9.96□□□□□ -0.82
CSMD1-217ENST00000602723 F8W810 466 aa9.96□□□□□ -0.82
CSMD1-217ENST00000602723 FUT11Q495W5 492 aa9.96□□□□□ -0.82
CSMD1-217ENST00000602723 RSBN1Q5VWQ0 802 aaPredicted RBP9.96□□□□□ -0.82
CSMD1-217ENST00000602723 C11orf88Q6PI97 169 aa9.96□□□□□ -0.82
CSMD1-217ENST00000602723 RAD9BQ6WBX8 426 aa9.96□□□□□ -0.82
CSMD1-217ENST00000602723 NLRP9Q7RTR0 991 aa9.96□□□□□ -0.82
CSMD1-217ENST00000602723 CACNA2D2Q9NY47 1150 aa9.96□□□□□ -0.82
CSMD1-217ENST00000602723 PHTF1Q9UMS5 762 aa9.96□□□□□ -0.82
CSMD1-217ENST00000602723 MYH7BA7E2Y1 1941 aa9.96□□□□□ -0.82
CSMD1-217ENST00000602723 EIF3DO15371 548 aaKnown RBP eCLIP9.96□□□□□ -0.82
CSMD1-217ENST00000602723 RHOBTB3O94955 611 aa9.96□□□□□ -0.82
CSMD1-217ENST00000602723 ACADSBP45954 432 aa9.96□□□□□ -0.82
CSMD1-217ENST00000602723 SEL1L3Q68CR1 1132 aa9.96□□□□□ -0.82
CSMD1-217ENST00000602723 ZNF513Q8N8E2 541 aaPredicted RBP9.96□□□□□ -0.82
CSMD1-217ENST00000602723 RERGLQ9H628 205 aa9.96□□□□□ -0.82
CSMD1-217ENST00000602723 PIPSLA2A3N6 862 aa9.95□□□□□ -0.82
CSMD1-217ENST00000602723 O00370 1275 aa9.95□□□□□ -0.82
CSMD1-217ENST00000602723 MMP10P09238 476 aa9.95□□□□□ -0.82
CSMD1-217ENST00000602723 INAQ16352 499 aa9.95□□□□□ -0.82
CSMD1-217ENST00000602723 TSGA10IPQ3SY00 556 aa9.95□□□□□ -0.82
CSMD1-217ENST00000602723 ARMC4Q5T2S8 1044 aa9.95□□□□□ -0.82
CSMD1-217ENST00000602723 GPAT2Q6NUI2 795 aa9.95□□□□□ -0.82
CSMD1-217ENST00000602723 APOBEC3FQ8IUX4 373 aaKnown RBP9.95□□□□□ -0.82
CSMD1-217ENST00000602723 DMAP1Q9NPF5 467 aaPredicted RBP9.95□□□□□ -0.82
CSMD1-217ENST00000602723 CTNNAL1Q9UBT7 734 aa9.95□□□□□ -0.82
CSMD1-217ENST00000602723 MED14O60244 1454 aa9.95□□□□□ -0.82
CSMD1-217ENST00000602723 SMNDC1O75940 238 aaKnown RBP eCLIP9.95□□□□□ -0.82
CSMD1-217ENST00000602723 MYBP10242 640 aa9.95□□□□□ -0.82
CSMD1-217ENST00000602723 ARL4DP49703 201 aa9.95□□□□□ -0.82
CSMD1-217ENST00000602723 EIF2B2P49770 351 aaKnown RBP9.95□□□□□ -0.82
CSMD1-217ENST00000602723 GOLGA7BQ2TAP0 167 aa9.95□□□□□ -0.82
CSMD1-217ENST00000602723 IL31Q6EBC2 164 aa9.95□□□□□ -0.82
CSMD1-217ENST00000602723 MAML3Q96JK9 1138 aa9.95□□□□□ -0.82
CSMD1-217ENST00000602723 CATSPER2Q96P56 530 aa9.95□□□□□ -0.82
CSMD1-217ENST00000602723 ZNF609O15014 1411 aa9.95□□□□□ -0.82
CSMD1-217ENST00000602723 MYMKA6NI61 221 aa9.95□□□□□ -0.82
CSMD1-217ENST00000602723 PTGER2P43116 358 aa9.95□□□□□ -0.82
CSMD1-217ENST00000602723 TRIQKQ629K1 86 aa9.95□□□□□ -0.82
CSMD1-217ENST00000602723 EIF3LQ9Y262 564 aaKnown RBP9.95□□□□□ -0.82
CSMD1-217ENST00000602723 METP08581 1390 aa9.95□□□□□ -0.82
CSMD1-217ENST00000602723 POLRMTO00411 1230 aaKnown RBP9.95□□□□□ -0.82
CSMD1-217ENST00000602723 ZNF682O95780 498 aa9.95□□□□□ -0.82
CSMD1-217ENST00000602723 ETFBP38117 255 aa9.95□□□□□ -0.82
CSMD1-217ENST00000602723 SARSP49591 514 aaKnown RBP9.95□□□□□ -0.82
CSMD1-217ENST00000602723 NPEPPSP55786 919 aa9.95□□□□□ -0.82
CSMD1-217ENST00000602723 EMC2Q15006 297 aa9.95□□□□□ -0.82
CSMD1-217ENST00000602723 TRMT6Q9UJA5 497 aaKnown RBP9.95□□□□□ -0.82
CSMD1-217ENST00000602723 F5H6K3 240 aa9.95□□□□□ -0.82
CSMD1-217ENST00000602723 ATP6V1B2P21281 511 aa9.95□□□□□ -0.82
CSMD1-217ENST00000602723 GPD1P21695 349 aa9.95□□□□□ -0.82
CSMD1-217ENST00000602723 CSE1LP55060 971 aaKnown RBP9.95□□□□□ -0.82
CSMD1-217ENST00000602723 KLRC3Q07444 240 aa9.95□□□□□ -0.82
CSMD1-217ENST00000602723 C6orf62Q9GZU0 229 aaPredicted RBP9.95□□□□□ -0.82
CSMD1-217ENST00000602723 RPS6KL1Q9Y6S9 549 aa9.95□□□□□ -0.82
CSMD1-217ENST00000602723 KDM6AO15550 1401 aaPredicted RBP9.95□□□□□ -0.82
CSMD1-217ENST00000602723 SDR42E2A6NKP2 422 aa9.95□□□□□ -0.82
CSMD1-217ENST00000602723 SKAP2O75563 359 aaPredicted RBP9.95□□□□□ -0.82
CSMD1-217ENST00000602723 CNTN1Q12860 1018 aa9.95□□□□□ -0.82
CSMD1-217ENST00000602723 DENND5BQ6ZUT9 1274 aa9.95□□□□□ -0.82
CSMD1-217ENST00000602723 BNIPLQ7Z465 357 aa9.95□□□□□ -0.82
CSMD1-217ENST00000602723 SLC38A7Q9NVC3 462 aa9.95□□□□□ -0.82
CSMD1-217ENST00000602723 INO80Q9ULG1 1556 aaPredicted RBP9.95□□□□□ -0.82
CSMD1-217ENST00000602723 RHOBTB1O94844 696 aa9.95□□□□□ -0.82
CSMD1-217ENST00000602723 FEN1P39748 380 aaKnown RBP9.95□□□□□ -0.82
CSMD1-217ENST00000602723 RPS7P62081 194 aaKnown RBP9.95□□□□□ -0.82
CSMD1-217ENST00000602723 KCNMA1Q12791 1236 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms