RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 KIF9Q9HAQ2 790 aa25.07■■□□□ 1.6
LSM4-204ENST00000594828 GKN1Q9NS71 199 aa25.07■■□□□ 1.6
LSM4-204ENST00000594828 NME7Q9Y5B8 376 aa25.07■■□□□ 1.6
LSM4-204ENST00000594828 TADA3O75528 432 aa25.06■■□□□ 1.6
LSM4-204ENST00000594828 C4BPAP04003 597 aaKnown RBP25.06■■□□□ 1.6
LSM4-204ENST00000594828 PRR29P0C7W0 189 aa25.06■■□□□ 1.6
LSM4-204ENST00000594828 PTPN1P18031 435 aaKnown RBP25.06■■□□□ 1.6
LSM4-204ENST00000594828 CTHP32929 405 aa25.06■■□□□ 1.6
LSM4-204ENST00000594828 MDH1BQ5I0G3 518 aa25.06■■□□□ 1.6
LSM4-204ENST00000594828 MAMSTRQ6ZN01 415 aa25.06■■□□□ 1.6
LSM4-204ENST00000594828 KRBA2Q6ZNG9 492 aa25.06■■□□□ 1.6
LSM4-204ENST00000594828 SPATA17Q96L03 361 aa25.06■■□□□ 1.6
LSM4-204ENST00000594828 CEP295NLQ96MC4 621 aa25.06■■□□□ 1.6
LSM4-204ENST00000594828 TRPC7Q9HCX4 862 aa25.06■■□□□ 1.6
LSM4-204ENST00000594828 PATJQ8NI35 1801 aa25.06■■□□□ 1.6
LSM4-204ENST00000594828 A8MXQ7 604 aa25.05■■□□□ 1.6
LSM4-204ENST00000594828 CALUO43852 315 aaPredicted RBP25.05■■□□□ 1.6
LSM4-204ENST00000594828 RHOBTB3O94955 611 aa25.05■■□□□ 1.6
LSM4-204ENST00000594828 CLSTN1O94985 981 aa25.05■■□□□ 1.6
LSM4-204ENST00000594828 ANXA13P27216 316 aa25.05■■□□□ 1.6
LSM4-204ENST00000594828 DPYDQ12882 1025 aa25.05■■□□□ 1.6
LSM4-204ENST00000594828 ITPRIPL2Q3MIP1 535 aa25.05■■□□□ 1.6
LSM4-204ENST00000594828 TSSK4Q6SA08 328 aa25.05■■□□□ 1.6
LSM4-204ENST00000594828 ATRIPQ8WXE1 791 aa25.05■■□□□ 1.6
LSM4-204ENST00000594828 FAM83CQ9BQN1 747 aa25.05■■□□□ 1.6
LSM4-204ENST00000594828 GOLPH3LQ9H4A5 285 aa25.05■■□□□ 1.6
LSM4-204ENST00000594828 VRTNQ9H8Y1 702 aa25.05■■□□□ 1.6
LSM4-204ENST00000594828 GDPD2Q9HCC8 539 aa25.05■■□□□ 1.6
LSM4-204ENST00000594828 PRMT8Q9NR22 394 aaPredicted RBP25.05■■□□□ 1.6
LSM4-204ENST00000594828 DENND4CQ5VZ89 1909 aa25.04■■□□□ 1.6
LSM4-204ENST00000594828 KINO60870 393 aaKnown RBP25.04■■□□□ 1.6
LSM4-204ENST00000594828 ZNF202O95125 648 aa25.04■■□□□ 1.6
LSM4-204ENST00000594828 DLG4P78352 724 aa25.04■■□□□ 1.6
LSM4-204ENST00000594828 NCOA4Q13772 614 aa25.04■■□□□ 1.6
LSM4-204ENST00000594828 LRRC32Q14392 662 aa25.04■■□□□ 1.6
LSM4-204ENST00000594828 BECN1Q14457 450 aa25.04■■□□□ 1.6
LSM4-204ENST00000594828 ZNF268Q14587 947 aaPredicted RBP25.04■■□□□ 1.6
LSM4-204ENST00000594828 ZNF699Q32M78 642 aa25.04■■□□□ 1.6
LSM4-204ENST00000594828 ZNF667Q5HYK9 610 aa25.04■■□□□ 1.6
LSM4-204ENST00000594828 CEP135Q66GS9 1140 aa25.04■■□□□ 1.6
LSM4-204ENST00000594828 CC2D1AQ6P1N0 951 aaPredicted RBP25.04■■□□□ 1.6
LSM4-204ENST00000594828 TXNDC11Q6PKC3 985 aa25.04■■□□□ 1.6
LSM4-204ENST00000594828 DENND5BQ6ZUT9 1274 aa25.04■■□□□ 1.6
LSM4-204ENST00000594828 CYP2S1Q96SQ9 504 aa25.04■■□□□ 1.6
LSM4-204ENST00000594828 DPEP3Q9H4B8 488 aa25.04■■□□□ 1.6
LSM4-204ENST00000594828 ZSCAN32Q9NX65 697 aa25.04■■□□□ 1.6
LSM4-204ENST00000594828 TRAF3IP3Q9Y228 551 aa25.04■■□□□ 1.6
LSM4-204ENST00000594828 FRMD4BQ9Y2L6 1034 aa25.04■■□□□ 1.6
LSM4-204ENST00000594828 PCDHGA2Q9Y5H1 932 aa25.04■■□□□ 1.6
LSM4-204ENST00000594828 F5P12259 2224 aa25.03■■□□□ 1.6
LSM4-204ENST00000594828 TRAV19A0A0A6YYK7 116 aa25.03■■□□□ 1.6
LSM4-204ENST00000594828 TRIM66O15016 1216 aa25.03■■□□□ 1.6
LSM4-204ENST00000594828 USP17L7P0C7H9 530 aa25.03■■□□□ 1.6
LSM4-204ENST00000594828 PPP2R5DQ14738 602 aa25.03■■□□□ 1.6
LSM4-204ENST00000594828 TMC2Q8TDI7 906 aa25.03■■□□□ 1.6
LSM4-204ENST00000594828 EHD2Q9NZN4 543 aa25.03■■□□□ 1.6
LSM4-204ENST00000594828 DMDP11532 3685 aa25.02■■□□□ 1.6
LSM4-204ENST00000594828 CKMP06732 381 aa25.02■■□□□ 1.6
LSM4-204ENST00000594828 CDH8P55286 799 aa25.02■■□□□ 1.6
LSM4-204ENST00000594828 FAM160A1Q05DH4 1040 aa25.02■■□□□ 1.6
LSM4-204ENST00000594828 RUNX3Q13761 415 aa25.02■■□□□ 1.6
LSM4-204ENST00000594828 PON2Q15165 354 aa25.02■■□□□ 1.6
LSM4-204ENST00000594828 DGKKQ5KSL6 1271 aa25.02■■□□□ 1.6
LSM4-204ENST00000594828 ZBTB44Q8NCP5 570 aa25.02■■□□□ 1.6
LSM4-204ENST00000594828 B3GALNT2Q8NCR0 500 aa25.02■■□□□ 1.6
LSM4-204ENST00000594828 NELL1Q92832 810 aa25.02■■□□□ 1.6
LSM4-204ENST00000594828 C8orf48Q96LL4 319 aa25.02■■□□□ 1.6
LSM4-204ENST00000594828 SLC22A12Q96S37 553 aa25.02■■□□□ 1.6
LSM4-204ENST00000594828 EBF3Q9H4W6 596 aa25.02■■□□□ 1.6
LSM4-204ENST00000594828 SMYD3Q9H7B4 428 aa25.02■■□□□ 1.6
LSM4-204ENST00000594828 RBM12Q9NTZ6 932 aaKnown RBP25.02■■□□□ 1.6
LSM4-204ENST00000594828 MAPK8IP1Q9UQF2 711 aa25.02■■□□□ 1.6
LSM4-204ENST00000594828 OBSL1O75147 1896 aa25.02■■□□□ 1.6
LSM4-204ENST00000594828 F8VP50 259 aa25.01■■□□□ 1.59
LSM4-204ENST00000594828 IKBKBO14920 756 aa25.01■■□□□ 1.59
LSM4-204ENST00000594828 VNN1O95497 513 aa25.01■■□□□ 1.59
LSM4-204ENST00000594828 CCR3P51677 355 aa25.01■■□□□ 1.59
LSM4-204ENST00000594828 USP46P62068 366 aa25.01■■□□□ 1.59
LSM4-204ENST00000594828 KCNB1Q14721 858 aa25.01■■□□□ 1.59
LSM4-204ENST00000594828 SGSM1Q2NKQ1 1148 aa25.01■■□□□ 1.59
LSM4-204ENST00000594828 ZACNQ401N2 412 aa25.01■■□□□ 1.59
LSM4-204ENST00000594828 TRIM68Q6AZZ1 485 aa25.01■■□□□ 1.59
LSM4-204ENST00000594828 ARL14EPQ8N8R7 260 aaPredicted RBP25.01■■□□□ 1.59
LSM4-204ENST00000594828 RIN3Q8TB24 985 aa25.01■■□□□ 1.59
LSM4-204ENST00000594828 CCDC34Q96HJ3 373 aa25.01■■□□□ 1.59
LSM4-204ENST00000594828 B3GNT5Q9BYG0 378 aa25.01■■□□□ 1.59
LSM4-204ENST00000594828 FAM126AQ9BYI3 521 aaPredicted RBP25.01■■□□□ 1.59
LSM4-204ENST00000594828 ELOVL4Q9GZR5 314 aa25.01■■□□□ 1.59
LSM4-204ENST00000594828 HPS4Q9NQG7 708 aa25.01■■□□□ 1.59
LSM4-204ENST00000594828 VPS13AQ96RL7 3174 aa25.01■■□□□ 1.59
LSM4-204ENST00000594828 FANCMQ8IYD8 2048 aa25■■□□□ 1.59
LSM4-204ENST00000594828 C2orf78A6NCI8 922 aa25■■□□□ 1.59
LSM4-204ENST00000594828 MAPK13O15264 365 aa25■■□□□ 1.59
LSM4-204ENST00000594828 HDCP19113 662 aa25■■□□□ 1.59
LSM4-204ENST00000594828 NR2F2P24468 414 aa25■■□□□ 1.59
LSM4-204ENST00000594828 CXCL12P48061 93 aa25■■□□□ 1.59
LSM4-204ENST00000594828 NOP14P78316 857 aaKnown RBP25■■□□□ 1.59
LSM4-204ENST00000594828 GAS6Q14393 721 aa25■■□□□ 1.59
LSM4-204ENST00000594828 WDR44Q5JSH3 913 aa25■■□□□ 1.59
LSM4-204ENST00000594828 SV2AQ7L0J3 742 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms