RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 AFF3P51826 1226 aaKnown RBP3.38□□□□□ -1.87
VRK3-204ENST00000593912 KRTAP10-9P60411 292 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 PRKCEQ02156 737 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 CYP4A11Q02928 519 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 BNIP3Q12983 259 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 DUSP4Q13115 394 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 PLD1Q13393 1074 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 ALDH1L2Q3SY69 923 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 MTERF2Q49AM1 385 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 CTXN3Q4LDR2 81 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 CDCP2Q5VXM1 449 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 TPGS2Q68CL5 300 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 TXNDC8Q6A555 127 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 MIS18BP1Q6P0N0 1132 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 DNAJB7Q7Z6W7 309 aaPredicted RBP3.38□□□□□ -1.87
VRK3-204ENST00000593912 ZNF410Q86VK4 478 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 SGMS1Q86VZ5 419 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 CACUL1Q86Y37 369 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 TBC1D10CQ8IV04 446 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 KBTBD3Q8NAB2 608 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 GLIS1Q8NBF1 620 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 LRRN4CLQ8ND94 238 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 CNNM3Q8NE01 707 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 STKLD1Q8NE28 680 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 CCDC26Q8TAB7 109 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 PRR7Q8TB68 274 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 SAP25Q8TEE9 199 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 IPO4Q8TEX9 1081 aaKnown RBP3.38□□□□□ -1.87
VRK3-204ENST00000593912 OSCP1Q8WVF1 389 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 CUL5Q93034 780 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 ATP2A3Q93084 1043 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 ATXN7L3BQ96GX2 97 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 MRGPRX1Q96LB2 322 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 DEPDC7Q96QD5 511 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 ACOX2Q99424 681 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 MXRA8Q9BRK3 442 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 TMUB1Q9BVT8 246 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 IL21Q9HBE4 155 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 CD248Q9HCU0 757 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 TDP1Q9NUW8 608 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 SUCLA2Q9P2R7 463 aaPredicted RBP3.38□□□□□ -1.87
VRK3-204ENST00000593912 SEL1LQ9UBV2 794 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 AFF4Q9UHB7 1163 aaKnown RBP3.38□□□□□ -1.87
VRK3-204ENST00000593912 MAD2L2Q9UI95 211 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 ANAPC4Q9UJX5 808 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 ENTPD4Q9Y227 616 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 SLC27A5Q9Y2P5 690 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 NEDD4P46934 1319 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 PRR19A6NJB7 356 aa3.37□□□□□ -1.87
VRK3-204ENST00000593912 METTL12A8MUP2 240 aa3.37□□□□□ -1.87
VRK3-204ENST00000593912 CASC3O15234 703 aaKnown RBP3.37□□□□□ -1.87
VRK3-204ENST00000593912 MAFGO15525 162 aa3.37□□□□□ -1.87
VRK3-204ENST00000593912 DHX15O43143 795 aaKnown RBP3.37□□□□□ -1.87
VRK3-204ENST00000593912 KCNAB3O43448 404 aa3.37□□□□□ -1.87
VRK3-204ENST00000593912 OPA1O60313 960 aa3.37□□□□□ -1.87
VRK3-204ENST00000593912 TSPAN1O60635 241 aa3.37□□□□□ -1.87
VRK3-204ENST00000593912 APODP05090 189 aa3.37□□□□□ -1.87
VRK3-204ENST00000593912 SNRPB2P08579 225 aaKnown RBP3.37□□□□□ -1.87
VRK3-204ENST00000593912 THEGLP0DJG4 465 aa3.37□□□□□ -1.87
VRK3-204ENST00000593912 SRGAP2CP0DJJ0 459 aa3.37□□□□□ -1.87
VRK3-204ENST00000593912 FECHP22830 423 aa3.37□□□□□ -1.87
VRK3-204ENST00000593912 ACP1P24666 158 aa3.37□□□□□ -1.87
VRK3-204ENST00000593912 AVPR1AP37288 418 aa3.37□□□□□ -1.87
VRK3-204ENST00000593912 EPHB3P54753 998 aa3.37□□□□□ -1.87
VRK3-204ENST00000593912 RPL10AP62906 217 aaKnown RBP3.37□□□□□ -1.87
VRK3-204ENST00000593912 LTBQ06643 244 aa3.37□□□□□ -1.87
VRK3-204ENST00000593912 USP4Q13107 963 aa3.37□□□□□ -1.87
VRK3-204ENST00000593912 ILKQ13418 452 aa3.37□□□□□ -1.87
VRK3-204ENST00000593912 TEAD4Q15561 434 aa3.37□□□□□ -1.87
VRK3-204ENST00000593912 TARBP2Q15633 366 aaKnown RBP3.37□□□□□ -1.87
VRK3-204ENST00000593912 ZNF77Q15935 545 aa3.37□□□□□ -1.87
VRK3-204ENST00000593912 SKOR2Q2VWA4 1001 aaPredicted RBP3.37□□□□□ -1.87
VRK3-204ENST00000593912 ZC2HC1CQ53FD0 456 aaPredicted RBP3.37□□□□□ -1.87
VRK3-204ENST00000593912 GLRA4Q5JXX5 417 aa3.37□□□□□ -1.87
VRK3-204ENST00000593912 EGFLAMQ63HQ2 1017 aa3.37□□□□□ -1.87
VRK3-204ENST00000593912 SP5Q6BEB4 398 aaPredicted RBP3.37□□□□□ -1.87
VRK3-204ENST00000593912 BORAQ6PGQ7 559 aa3.37□□□□□ -1.87
VRK3-204ENST00000593912 IGF2-ASQ6U949 168 aa3.37□□□□□ -1.87
VRK3-204ENST00000593912 ADAT2Q7Z6V5 191 aaKnown RBP3.37□□□□□ -1.87
VRK3-204ENST00000593912 CLEC14AQ86T13 490 aa3.37□□□□□ -1.87
VRK3-204ENST00000593912 TMEM150AQ86TG1 271 aa3.37□□□□□ -1.87
VRK3-204ENST00000593912 FAM124AQ86V42 546 aa3.37□□□□□ -1.87
VRK3-204ENST00000593912 ERC1Q8IUD2 1116 aa3.37□□□□□ -1.87
VRK3-204ENST00000593912 TP53INP2Q8IXH6 220 aa3.37□□□□□ -1.87
VRK3-204ENST00000593912 NAGSQ8N159 534 aa3.37□□□□□ -1.87
VRK3-204ENST00000593912 CLASRPQ8N2M8 674 aaKnown RBP3.37□□□□□ -1.87
VRK3-204ENST00000593912 ZNF276Q8N554 614 aa3.37□□□□□ -1.87
VRK3-204ENST00000593912 EFCAB3Q8N7B9 438 aa3.37□□□□□ -1.87
VRK3-204ENST00000593912 NSUN7Q8NE18 718 aaKnown RBP3.37□□□□□ -1.87
VRK3-204ENST00000593912 OTUD7AQ8TE49 926 aaPredicted RBP3.37□□□□□ -1.87
VRK3-204ENST00000593912 PSMG2Q969U7 264 aa3.37□□□□□ -1.87
VRK3-204ENST00000593912 ABHD17AQ96GS6 310 aa3.37□□□□□ -1.87
VRK3-204ENST00000593912 HS3ST6Q96QI5 342 aa3.37□□□□□ -1.87
VRK3-204ENST00000593912 SLC22A12Q96S37 553 aa3.37□□□□□ -1.87
VRK3-204ENST00000593912 CEP89Q96ST8 783 aa3.37□□□□□ -1.87
VRK3-204ENST00000593912 NIFKQ9BYG3 293 aaKnown RBP3.37□□□□□ -1.87
VRK3-204ENST00000593912 TRIM6Q9C030 488 aaPredicted RBP3.37□□□□□ -1.87
VRK3-204ENST00000593912 C6orf106Q9H6K1 298 aaPredicted RBP3.37□□□□□ -1.87
VRK3-204ENST00000593912 CAAP1Q9H8G2 361 aa3.37□□□□□ -1.87
VRK3-204ENST00000593912 BMP2KQ9NSY1 1161 aaPredicted RBP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms