RNA–Protein interactions for RNA: ENST00000592138.5

TPM4-215, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-215ENST00000592138 KREMEN1Q96MU8 473 aa10.33□□□□□ -0.76
TPM4-215ENST00000592138 ERGIC2Q96RQ1 377 aa10.33□□□□□ -0.76
TPM4-215ENST00000592138 APOL5Q9BWW9 433 aa10.33□□□□□ -0.76
TPM4-215ENST00000592138 B3GNT5Q9BYG0 378 aa10.33□□□□□ -0.76
TPM4-215ENST00000592138 POMKQ9H5K3 350 aa10.33□□□□□ -0.76
TPM4-215ENST00000592138 CSNK1G1Q9HCP0 422 aa10.33□□□□□ -0.76
TPM4-215ENST00000592138 PNPLA8Q9NP80 782 aa10.33□□□□□ -0.76
TPM4-215ENST00000592138 SIX2Q9NPC8 291 aa10.33□□□□□ -0.76
TPM4-215ENST00000592138 UBE2TQ9NPD8 197 aaPredicted RBP10.33□□□□□ -0.76
TPM4-215ENST00000592138 DNMT3BQ9UBC3 853 aaKnown RBP10.33□□□□□ -0.76
TPM4-215ENST00000592138 NR2E1Q9Y466 385 aa10.33□□□□□ -0.76
TPM4-215ENST00000592138 ZFP37Q9Y6Q3 630 aaPredicted RBP10.33□□□□□ -0.76
TPM4-215ENST00000592138 A0A1B0GTH6 734 aa10.32□□□□□ -0.76
TPM4-215ENST00000592138 NOL4O94818 638 aa10.32□□□□□ -0.76
TPM4-215ENST00000592138 RHOP08100 348 aa10.32□□□□□ -0.76
TPM4-215ENST00000592138 VDRP11473 427 aa10.32□□□□□ -0.76
TPM4-215ENST00000592138 UCHL3P15374 230 aa10.32□□□□□ -0.76
TPM4-215ENST00000592138 BDNFP23560 247 aa10.32□□□□□ -0.76
TPM4-215ENST00000592138 ANXA13P27216 316 aa10.32□□□□□ -0.76
TPM4-215ENST00000592138 MEA1Q16626 185 aa10.32□□□□□ -0.76
TPM4-215ENST00000592138 CCDC142Q17RM4 750 aa10.32□□□□□ -0.76
TPM4-215ENST00000592138 FILIP1LQ4L180 1135 aa10.32□□□□□ -0.76
TPM4-215ENST00000592138 PRSS36Q5K4E3 855 aa10.32□□□□□ -0.76
TPM4-215ENST00000592138 CYP4A22Q5TCH4 519 aa10.32□□□□□ -0.76
TPM4-215ENST00000592138 KLHDC7AQ5VTJ3 777 aa10.32□□□□□ -0.76
TPM4-215ENST00000592138 TMEM270Q6UE05 265 aa10.32□□□□□ -0.76
TPM4-215ENST00000592138 PDZD4Q76G19 769 aaPredicted RBP10.32□□□□□ -0.76
TPM4-215ENST00000592138 OTOP3Q7RTS5 596 aa10.32□□□□□ -0.76
TPM4-215ENST00000592138 GRASPQ7Z6J2 395 aaPredicted RBP10.32□□□□□ -0.76
TPM4-215ENST00000592138 DNAJB7Q7Z6W7 309 aaPredicted RBP10.32□□□□□ -0.76
TPM4-215ENST00000592138 TMC8Q8IU68 726 aa10.32□□□□□ -0.76
TPM4-215ENST00000592138 C12orf29Q8N999 325 aa10.32□□□□□ -0.76
TPM4-215ENST00000592138 SLC2A14Q8TDB8 520 aa10.32□□□□□ -0.76
TPM4-215ENST00000592138 SHC3Q92529 594 aa10.32□□□□□ -0.76
TPM4-215ENST00000592138 KAT5Q92993 513 aa10.32□□□□□ -0.76
TPM4-215ENST00000592138 CYFIP2Q96F07 1278 aa10.32□□□□□ -0.76
TPM4-215ENST00000592138 HEXIM2Q96MH2 286 aaKnown RBP10.32□□□□□ -0.76
TPM4-215ENST00000592138 ANP32EQ9BTT0 268 aa10.32□□□□□ -0.76
TPM4-215ENST00000592138 TTLL2Q9BWV7 592 aa10.32□□□□□ -0.76
TPM4-215ENST00000592138 NAA15Q9BXJ9 866 aaKnown RBP10.32□□□□□ -0.76
TPM4-215ENST00000592138 LRRC3Q9BY71 257 aa10.32□□□□□ -0.76
TPM4-215ENST00000592138 ZNF518BQ9C0D4 1074 aa10.32□□□□□ -0.76
TPM4-215ENST00000592138 DMAP1Q9NPF5 467 aaPredicted RBP10.32□□□□□ -0.76
TPM4-215ENST00000592138 RTN4Q9NQC3 1192 aaKnown RBP10.32□□□□□ -0.76
TPM4-215ENST00000592138 ASAH2Q9NR71 780 aa10.32□□□□□ -0.76
TPM4-215ENST00000592138 COMMD8Q9NX08 183 aa10.32□□□□□ -0.76
TPM4-215ENST00000592138 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.32□□□□□ -0.76
TPM4-215ENST00000592138 UXTQ9UBK9 157 aaPredicted RBP10.32□□□□□ -0.76
TPM4-215ENST00000592138 ZMYM5Q9UJ78 669 aa10.32□□□□□ -0.76
TPM4-215ENST00000592138 SIK3Q9Y2K2 1263 aa10.32□□□□□ -0.76
TPM4-215ENST00000592138 TRIOO75962 3097 aa10.32□□□□□ -0.76
TPM4-215ENST00000592138 MTCL1Q9Y4B5 1905 aaKnown RBP10.31□□□□□ -0.76
TPM4-215ENST00000592138 A0A1W2PQC6 194 aa10.31□□□□□ -0.76
TPM4-215ENST00000592138 C19orf67A6NJJ6 358 aa10.31□□□□□ -0.76
TPM4-215ENST00000592138 SOBPA7XYQ1 873 aa10.31□□□□□ -0.76
TPM4-215ENST00000592138 LOC730098B7Z3J9 87 aa10.31□□□□□ -0.76
TPM4-215ENST00000592138 SOAT2O75908 522 aa10.31□□□□□ -0.76
TPM4-215ENST00000592138 FAM200BP0CF97 657 aa10.31□□□□□ -0.76
TPM4-215ENST00000592138 HMGA1P17096 107 aaKnown RBP10.31□□□□□ -0.76
TPM4-215ENST00000592138 NPR3P17342 541 aa10.31□□□□□ -0.76
TPM4-215ENST00000592138 FSHRP23945 695 aa10.31□□□□□ -0.76
TPM4-215ENST00000592138 GRIK1P39086 918 aa10.31□□□□□ -0.76
TPM4-215ENST00000592138 UBXN1Q04323 297 aa10.31□□□□□ -0.76
TPM4-215ENST00000592138 ZP2Q05996 745 aa10.31□□□□□ -0.76
TPM4-215ENST00000592138 ZNF394Q53GI3 561 aa10.31□□□□□ -0.76
TPM4-215ENST00000592138 SGO2Q562F6 1265 aa10.31□□□□□ -0.76
TPM4-215ENST00000592138 PPP1R26Q5T8A7 1209 aaPredicted RBP10.31□□□□□ -0.76
TPM4-215ENST00000592138 DENND5BQ6ZUT9 1274 aa10.31□□□□□ -0.76
TPM4-215ENST00000592138 ZDHHC14Q8IZN3 488 aa10.31□□□□□ -0.76
TPM4-215ENST00000592138 PLCD3Q8N3E9 789 aa10.31□□□□□ -0.76
TPM4-215ENST00000592138 ANKRD52Q8NB46 1076 aa10.31□□□□□ -0.76
TPM4-215ENST00000592138 RBBP8NLQ8NC74 664 aaPredicted RBP10.31□□□□□ -0.76
TPM4-215ENST00000592138 FEZF2Q8TBJ5 459 aa10.31□□□□□ -0.76
TPM4-215ENST00000592138 ACSF2Q96CM8 615 aaPredicted RBP10.31□□□□□ -0.76
TPM4-215ENST00000592138 NECAB3Q96P71 396 aaPredicted RBP10.31□□□□□ -0.76
TPM4-215ENST00000592138 LPIN3Q9BQK8 851 aa10.31□□□□□ -0.76
TPM4-215ENST00000592138 MED10Q9BTT4 135 aa10.31□□□□□ -0.76
TPM4-215ENST00000592138 UBXN6Q9BZV1 441 aa10.31□□□□□ -0.76
TPM4-215ENST00000592138 GANQ9H2C0 597 aa10.31□□□□□ -0.76
TPM4-215ENST00000592138 KRT82Q9NSB4 513 aa10.31□□□□□ -0.76
TPM4-215ENST00000592138 IL37Q9NZH6 218 aa10.31□□□□□ -0.76
TPM4-215ENST00000592138 EPS15L1Q9UBC2 864 aa10.31□□□□□ -0.76
TPM4-215ENST00000592138 DNAJC12Q9UKB3 198 aa10.31□□□□□ -0.76
TPM4-215ENST00000592138 PCDHB4Q9Y5E5 795 aa10.31□□□□□ -0.76
TPM4-215ENST00000592138 CFAP54Q96N23 3096 aa10.31□□□□□ -0.76
TPM4-215ENST00000592138 CACNA1AO00555 2505 aa10.31□□□□□ -0.76
TPM4-215ENST00000592138 FAM92AA1XBS5 289 aa10.3□□□□□ -0.76
TPM4-215ENST00000592138 SLC38A8A6NNN8 435 aa10.3□□□□□ -0.76
TPM4-215ENST00000592138 F8VP50 259 aa10.3□□□□□ -0.76
TPM4-215ENST00000592138 O00370 1275 aa10.3□□□□□ -0.76
TPM4-215ENST00000592138 CLDN5O00501 218 aa10.3□□□□□ -0.76
TPM4-215ENST00000592138 TNFRSF10BO14763 440 aa10.3□□□□□ -0.76
TPM4-215ENST00000592138 AP1G2O75843 785 aa10.3□□□□□ -0.76
TPM4-215ENST00000592138 RTN3O95197 1032 aaPredicted RBP10.3□□□□□ -0.76
TPM4-215ENST00000592138 SERPINC1P01008 464 aa10.3□□□□□ -0.76
TPM4-215ENST00000592138 CCDC130P13994 396 aa10.3□□□□□ -0.76
TPM4-215ENST00000592138 CDC25CP30307 473 aa10.3□□□□□ -0.76
TPM4-215ENST00000592138 PPP3CCP48454 512 aa10.3□□□□□ -0.76
TPM4-215ENST00000592138 CACNA2D1P54289 1103 aa10.3□□□□□ -0.76
TPM4-215ENST00000592138 SLC8A3P57103 927 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms