RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 PLD1Q13393 1074 aa12.89□□□□□ -0.35
DNMT1-218ENST00000589294 COL19A1Q14993 1142 aa12.89□□□□□ -0.35
DNMT1-218ENST00000589294 CTC1Q2NKJ3 1217 aa12.89□□□□□ -0.35
DNMT1-218ENST00000589294 LIN9Q5TKA1 542 aa12.89□□□□□ -0.35
DNMT1-218ENST00000589294 SPATA31D4Q6ZUB0 917 aa12.89□□□□□ -0.35
DNMT1-218ENST00000589294 NOP9Q86U38 636 aaKnown RBP12.89□□□□□ -0.35
DNMT1-218ENST00000589294 FAM35AQ86V20 835 aa12.89□□□□□ -0.35
DNMT1-218ENST00000589294 EPS8L1Q8TE68 723 aa12.89□□□□□ -0.35
DNMT1-218ENST00000589294 MYLIPQ8WY64 445 aa12.89□□□□□ -0.35
DNMT1-218ENST00000589294 DDX1Q92499 740 aaKnown RBP12.89□□□□□ -0.35
DNMT1-218ENST00000589294 CASP10Q92851 521 aa12.89□□□□□ -0.35
DNMT1-218ENST00000589294 SPATA17Q96L03 361 aa12.89□□□□□ -0.35
DNMT1-218ENST00000589294 GUCD1Q96NT3 240 aa12.89□□□□□ -0.35
DNMT1-218ENST00000589294 ZNF518BQ9C0D4 1074 aa12.89□□□□□ -0.35
DNMT1-218ENST00000589294 IGFLR1Q9H665 355 aa12.89□□□□□ -0.35
DNMT1-218ENST00000589294 DZANK1Q9NVP4 752 aa12.89□□□□□ -0.35
DNMT1-218ENST00000589294 NOCTQ9UK39 431 aaKnown RBP12.89□□□□□ -0.35
DNMT1-218ENST00000589294 TSPAN16Q9UKR8 245 aa12.89□□□□□ -0.35
DNMT1-218ENST00000589294 PRRC2BQ5JSZ5 2229 aaKnown RBP12.89□□□□□ -0.35
DNMT1-218ENST00000589294 ZMYND10O75800 440 aa12.88□□□□□ -0.35
DNMT1-218ENST00000589294 MICAL2O94851 1124 aa12.88□□□□□ -0.35
DNMT1-218ENST00000589294 CALCAP01258 141 aa12.88□□□□□ -0.35
DNMT1-218ENST00000589294 HNRNPA1P09651 372 aaKnown RBP eCLIP12.88□□□□□ -0.35
DNMT1-218ENST00000589294 SETSIPP0DME0 302 aa12.88□□□□□ -0.35
DNMT1-218ENST00000589294 FOSL2P15408 326 aa12.88□□□□□ -0.35
DNMT1-218ENST00000589294 EPCAMP16422 314 aa12.88□□□□□ -0.35
DNMT1-218ENST00000589294 NPR3P17342 541 aa12.88□□□□□ -0.35
DNMT1-218ENST00000589294 ADORA2BP29275 332 aa12.88□□□□□ -0.35
DNMT1-218ENST00000589294 GRIK1P39086 918 aa12.88□□□□□ -0.35
DNMT1-218ENST00000589294 BCAT1P54687 386 aa12.88□□□□□ -0.35
DNMT1-218ENST00000589294 CDK17Q00537 523 aa12.88□□□□□ -0.35
DNMT1-218ENST00000589294 KLHL30Q0D2K2 578 aa12.88□□□□□ -0.35
DNMT1-218ENST00000589294 BST2Q10589 180 aaKnown RBP12.88□□□□□ -0.35
DNMT1-218ENST00000589294 CCDC142Q17RM4 750 aa12.88□□□□□ -0.35
DNMT1-218ENST00000589294 GOLGA7BQ2TAP0 167 aa12.88□□□□□ -0.35
DNMT1-218ENST00000589294 MGAT5BQ3V5L5 792 aa12.88□□□□□ -0.35
DNMT1-218ENST00000589294 PKDCCQ504Y2 493 aa12.88□□□□□ -0.35
DNMT1-218ENST00000589294 CYP26C1Q6V0L0 522 aa12.88□□□□□ -0.35
DNMT1-218ENST00000589294 TRIM72Q6ZMU5 477 aa12.88□□□□□ -0.35
DNMT1-218ENST00000589294 TC2NQ8N9U0 490 aa12.88□□□□□ -0.35
DNMT1-218ENST00000589294 STK32AQ8WU08 396 aa12.88□□□□□ -0.35
DNMT1-218ENST00000589294 SLC35F5Q8WV83 523 aa12.88□□□□□ -0.35
DNMT1-218ENST00000589294 PANX2Q96RD6 677 aa12.88□□□□□ -0.35
DNMT1-218ENST00000589294 AGPAT1Q99943 283 aa12.88□□□□□ -0.35
DNMT1-218ENST00000589294 PDCL3Q9H2J4 239 aa12.88□□□□□ -0.35
DNMT1-218ENST00000589294 CRISPLD1Q9H336 500 aa12.88□□□□□ -0.35
DNMT1-218ENST00000589294 PNPLA8Q9NP80 782 aa12.88□□□□□ -0.35
DNMT1-218ENST00000589294 DMAP1Q9NPF5 467 aaPredicted RBP12.88□□□□□ -0.35
DNMT1-218ENST00000589294 MAN1C1Q9NR34 630 aa12.88□□□□□ -0.35
DNMT1-218ENST00000589294 ABHD10Q9NUJ1 306 aa12.88□□□□□ -0.35
DNMT1-218ENST00000589294 ZDHHC7Q9NXF8 308 aa12.88□□□□□ -0.35
DNMT1-218ENST00000589294 ASB3Q9Y575 518 aa12.88□□□□□ -0.35
DNMT1-218ENST00000589294 LSM8O95777 96 aaKnown RBP12.87□□□□□ -0.35
DNMT1-218ENST00000589294 C8AP07357 584 aa12.87□□□□□ -0.35
DNMT1-218ENST00000589294 POU2F2P09086 479 aa12.87□□□□□ -0.35
DNMT1-218ENST00000589294 HOXB8P17481 243 aaPredicted RBP12.87□□□□□ -0.35
DNMT1-218ENST00000589294 CHRNB2P17787 502 aa12.87□□□□□ -0.35
DNMT1-218ENST00000589294 TNFAIP3P21580 790 aa12.87□□□□□ -0.35
DNMT1-218ENST00000589294 ANXA13P27216 316 aa12.87□□□□□ -0.35
DNMT1-218ENST00000589294 GTF2F1P35269 517 aaKnown RBP eCLIP12.87□□□□□ -0.35
DNMT1-218ENST00000589294 GPD2P43304 727 aa12.87□□□□□ -0.35
DNMT1-218ENST00000589294 EPHB3P54753 998 aa12.87□□□□□ -0.35
DNMT1-218ENST00000589294 GSDMDP57764 484 aa12.87□□□□□ -0.35
DNMT1-218ENST00000589294 DDR2Q16832 855 aa12.87□□□□□ -0.35
DNMT1-218ENST00000589294 PPM1LQ5SGD2 360 aa12.87□□□□□ -0.35
DNMT1-218ENST00000589294 E4F1Q66K89 784 aaPredicted RBP12.87□□□□□ -0.35
DNMT1-218ENST00000589294 HGSNATQ68CP4 663 aa12.87□□□□□ -0.35
DNMT1-218ENST00000589294 LLGL2Q6P1M3 1020 aa12.87□□□□□ -0.35
DNMT1-218ENST00000589294 WDR59Q6PJI9 974 aa12.87□□□□□ -0.35
DNMT1-218ENST00000589294 CLEC20AQ6ZU45 233 aa12.87□□□□□ -0.35
DNMT1-218ENST00000589294 VPS36Q86VN1 386 aa12.87□□□□□ -0.35
DNMT1-218ENST00000589294 TTC30AQ86WT1 665 aa12.87□□□□□ -0.35
DNMT1-218ENST00000589294 SCN4BQ8IWT1 228 aa12.87□□□□□ -0.35
DNMT1-218ENST00000589294 SPC24Q8NBT2 197 aa12.87□□□□□ -0.35
DNMT1-218ENST00000589294 TMEM35BQ8NCS4 154 aa12.87□□□□□ -0.35
DNMT1-218ENST00000589294 CMASQ8NFW8 434 aaPredicted RBP12.87□□□□□ -0.35
DNMT1-218ENST00000589294 VN1R2Q8NFZ6 395 aa12.87□□□□□ -0.35
DNMT1-218ENST00000589294 SLC7A14Q8TBB6 771 aa12.87□□□□□ -0.35
DNMT1-218ENST00000589294 UBA3Q8TBC4 463 aa12.87□□□□□ -0.35
DNMT1-218ENST00000589294 PABPC5Q96DU9 382 aaKnown RBP12.87□□□□□ -0.35
DNMT1-218ENST00000589294 KCNK16Q96T55 309 aa12.87□□□□□ -0.35
DNMT1-218ENST00000589294 SEPT5Q99719 369 aaPredicted RBP12.87□□□□□ -0.35
DNMT1-218ENST00000589294 SMOQ99835 787 aa12.87□□□□□ -0.35
DNMT1-218ENST00000589294 RHOBTB2Q9BYZ6 727 aa12.87□□□□□ -0.35
DNMT1-218ENST00000589294 HAUS4Q9H6D7 363 aa12.87□□□□□ -0.35
DNMT1-218ENST00000589294 KRT82Q9NSB4 513 aa12.87□□□□□ -0.35
DNMT1-218ENST00000589294 COMMD8Q9NX08 183 aa12.87□□□□□ -0.35
DNMT1-218ENST00000589294 EHD2Q9NZN4 543 aa12.87□□□□□ -0.35
DNMT1-218ENST00000589294 CEP83Q9Y592 693 aa12.87□□□□□ -0.35
DNMT1-218ENST00000589294 INSL5Q9Y5Q6 135 aa12.87□□□□□ -0.35
DNMT1-218ENST00000589294 COL4A4P53420 1690 aaPredicted RBP12.86□□□□□ -0.35
DNMT1-218ENST00000589294 F8VP50 259 aa12.86□□□□□ -0.35
DNMT1-218ENST00000589294 XPO1O14980 1071 aaKnown RBP12.86□□□□□ -0.35
DNMT1-218ENST00000589294 BEST1O76090 585 aa12.86□□□□□ -0.35
DNMT1-218ENST00000589294 LRG1P02750 347 aa12.86□□□□□ -0.35
DNMT1-218ENST00000589294 MMEP08473 750 aa12.86□□□□□ -0.35
DNMT1-218ENST00000589294 SKILP12757 684 aa12.86□□□□□ -0.35
DNMT1-218ENST00000589294 CDH5P33151 784 aaPredicted RBP12.86□□□□□ -0.35
DNMT1-218ENST00000589294 RPL34P49207 117 aaKnown RBP12.86□□□□□ -0.35
DNMT1-218ENST00000589294 CDR1P51861 262 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 696.1 ms