RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 DGKKQ5KSL6 1271 aa20.09■□□□□ 0.81
TRIM47-205ENST00000587774 C4orf50Q6ZRC1 276 aa20.09■□□□□ 0.81
TRIM47-205ENST00000587774 HS2ST1Q7LGA3 356 aa20.09■□□□□ 0.81
TRIM47-205ENST00000587774 SPRYD3Q8NCJ5 442 aa20.09■□□□□ 0.81
TRIM47-205ENST00000587774 FNBP1Q96RU3 617 aa20.09■□□□□ 0.81
TRIM47-205ENST00000587774 SLC22A12Q96S37 553 aa20.09■□□□□ 0.81
TRIM47-205ENST00000587774 MMS19Q96T76 1030 aa20.09■□□□□ 0.81
TRIM47-205ENST00000587774 GZF1Q9H116 711 aaPredicted RBP20.09■□□□□ 0.81
TRIM47-205ENST00000587774 TRPC7Q9HCX4 862 aa20.09■□□□□ 0.81
TRIM47-205ENST00000587774 C2orf42Q9NWW7 574 aa20.09■□□□□ 0.81
TRIM47-205ENST00000587774 NME7Q9Y5B8 376 aa20.09■□□□□ 0.81
TRIM47-205ENST00000587774 K7ESF4 209 aa20.08■□□□□ 0.81
TRIM47-205ENST00000587774 PAPSS2O95340 614 aaPredicted RBP20.08■□□□□ 0.81
TRIM47-205ENST00000587774 CST3P01034 146 aaPredicted RBP20.08■□□□□ 0.81
TRIM47-205ENST00000587774 SNRPFP62306 86 aaKnown RBP20.08■□□□□ 0.81
TRIM47-205ENST00000587774 CYP27A1Q02318 531 aa20.08■□□□□ 0.81
TRIM47-205ENST00000587774 DMWDQ09019 674 aa20.08■□□□□ 0.81
TRIM47-205ENST00000587774 RUNX3Q13761 415 aa20.08■□□□□ 0.81
TRIM47-205ENST00000587774 ZNF268Q14587 947 aaPredicted RBP20.08■□□□□ 0.81
TRIM47-205ENST00000587774 ATL3Q6DD88 541 aa20.08■□□□□ 0.81
TRIM47-205ENST00000587774 ERMP1Q7Z2K6 904 aa20.08■□□□□ 0.81
TRIM47-205ENST00000587774 MRPL45Q9BRJ2 306 aaKnown RBP20.08■□□□□ 0.81
TRIM47-205ENST00000587774 MAGEC2Q9UBF1 373 aaPredicted RBP20.08■□□□□ 0.81
TRIM47-205ENST00000587774 CFAP45Q9UL16 551 aa20.08■□□□□ 0.81
TRIM47-205ENST00000587774 THADAQ6YHU6 1953 aa20.08■□□□□ 0.8
TRIM47-205ENST00000587774 PVALEFA0A1B0GWK0 134 aa20.07■□□□□ 0.8
TRIM47-205ENST00000587774 CKMP06732 381 aa20.07■□□□□ 0.8
TRIM47-205ENST00000587774 PDGFRBP09619 1106 aa20.07■□□□□ 0.8
TRIM47-205ENST00000587774 ARSAP15289 507 aa20.07■□□□□ 0.8
TRIM47-205ENST00000587774 BDNFP23560 247 aa20.07■□□□□ 0.8
TRIM47-205ENST00000587774 FOXK2Q01167 660 aa20.07■□□□□ 0.8
TRIM47-205ENST00000587774 FAM160A1Q05DH4 1040 aa20.07■□□□□ 0.8
TRIM47-205ENST00000587774 USP4Q13107 963 aa20.07■□□□□ 0.8
TRIM47-205ENST00000587774 C12orf56Q8IXR9 622 aa20.07■□□□□ 0.8
TRIM47-205ENST00000587774 PCED1BQ96HM7 432 aa20.07■□□□□ 0.8
TRIM47-205ENST00000587774 SERTAD1Q9UHV2 236 aa20.07■□□□□ 0.8
TRIM47-205ENST00000587774 SPTBN2O15020 2390 aa20.06■□□□□ 0.8
TRIM47-205ENST00000587774 TRAV19A0A0A6YYK7 116 aa20.06■□□□□ 0.8
TRIM47-205ENST00000587774 C2orf78A6NCI8 922 aa20.06■□□□□ 0.8
TRIM47-205ENST00000587774 CHURC1-FNTBB4DL54 471 aa20.06■□□□□ 0.8
TRIM47-205ENST00000587774 ACTN4O43707 911 aaKnown RBP20.06■□□□□ 0.8
TRIM47-205ENST00000587774 KLRC4O43908 158 aa20.06■□□□□ 0.8
TRIM47-205ENST00000587774 HOXC13P31276 330 aa20.06■□□□□ 0.8
TRIM47-205ENST00000587774 FNTBP49356 437 aa20.06■□□□□ 0.8
TRIM47-205ENST00000587774 CASP4P49662 377 aa20.06■□□□□ 0.8
TRIM47-205ENST00000587774 MTF1Q14872 753 aa20.06■□□□□ 0.8
TRIM47-205ENST00000587774 MAPRE1Q15691 268 aaKnown RBP20.06■□□□□ 0.8
TRIM47-205ENST00000587774 ZNF77Q15935 545 aa20.06■□□□□ 0.8
TRIM47-205ENST00000587774 LPAL2Q16609 132 aa20.06■□□□□ 0.8
TRIM47-205ENST00000587774 KNOP1Q1ED39 458 aaKnown RBP20.06■□□□□ 0.8
TRIM47-205ENST00000587774 MDH1BQ5I0G3 518 aa20.06■□□□□ 0.8
TRIM47-205ENST00000587774 CC2D1AQ6P1N0 951 aaPredicted RBP20.06■□□□□ 0.8
TRIM47-205ENST00000587774 VSTM1Q6UX27 236 aa20.06■□□□□ 0.8
TRIM47-205ENST00000587774 CEP57L1Q8IYX8 460 aa20.06■□□□□ 0.8
TRIM47-205ENST00000587774 TTC16Q8NEE8 873 aa20.06■□□□□ 0.8
TRIM47-205ENST00000587774 MYCBPAPQ8TBZ2 947 aa20.06■□□□□ 0.8
TRIM47-205ENST00000587774 ZNF516Q92618 1163 aa20.06■□□□□ 0.8
TRIM47-205ENST00000587774 SECISBP2LQ93073 1101 aaKnown RBP20.06■□□□□ 0.8
TRIM47-205ENST00000587774 SPATA17Q96L03 361 aa20.06■□□□□ 0.8
TRIM47-205ENST00000587774 CYP2S1Q96SQ9 504 aa20.06■□□□□ 0.8
TRIM47-205ENST00000587774 CGNQ9P2M7 1197 aaKnown RBP20.06■□□□□ 0.8
TRIM47-205ENST00000587774 PLXND1Q9Y4D7 1925 aa20.06■□□□□ 0.8
TRIM47-205ENST00000587774 TACC1O75410 805 aa20.05■□□□□ 0.8
TRIM47-205ENST00000587774 USP17L7P0C7H9 530 aa20.05■□□□□ 0.8
TRIM47-205ENST00000587774 GRIK1P39086 918 aa20.05■□□□□ 0.8
TRIM47-205ENST00000587774 USP46P62068 366 aa20.05■□□□□ 0.8
TRIM47-205ENST00000587774 TNNC1P63316 161 aa20.05■□□□□ 0.8
TRIM47-205ENST00000587774 WDR72Q3MJ13 1102 aa20.05■□□□□ 0.8
TRIM47-205ENST00000587774 TMEM196Q5HYL7 178 aa20.05■□□□□ 0.8
TRIM47-205ENST00000587774 HEATR6Q6AI08 1181 aaKnown RBP20.05■□□□□ 0.8
TRIM47-205ENST00000587774 FSTL4Q6MZW2 842 aa20.05■□□□□ 0.8
TRIM47-205ENST00000587774 PKN3Q6P5Z2 889 aa20.05■□□□□ 0.8
TRIM47-205ENST00000587774 SYNPOQ8N3V7 929 aa20.05■□□□□ 0.8
TRIM47-205ENST00000587774 ARL14EPQ8N8R7 260 aaPredicted RBP20.05■□□□□ 0.8
TRIM47-205ENST00000587774 FSIP1Q8NA03 581 aa20.05■□□□□ 0.8
TRIM47-205ENST00000587774 KIAA0895Q8NCT3 520 aa20.05■□□□□ 0.8
TRIM47-205ENST00000587774 PLEKHO2Q8TD55 490 aa20.05■□□□□ 0.8
TRIM47-205ENST00000587774 SNX25Q9H3E2 840 aa20.05■□□□□ 0.8
TRIM47-205ENST00000587774 DPEP3Q9H4B8 488 aa20.05■□□□□ 0.8
TRIM47-205ENST00000587774 GCNT4Q9P109 453 aa20.05■□□□□ 0.8
TRIM47-205ENST00000587774 RCOR1Q9UKL0 485 aa20.05■□□□□ 0.8
TRIM47-205ENST00000587774 TNRC6BQ9UPQ9 1833 aaKnown RBP20.04■□□□□ 0.8
TRIM47-205ENST00000587774 EXOC3O60645 756 aa20.04■□□□□ 0.8
TRIM47-205ENST00000587774 SLFN14P0C7P3 912 aa20.04■□□□□ 0.8
TRIM47-205ENST00000587774 ANXA13P27216 316 aa20.04■□□□□ 0.8
TRIM47-205ENST00000587774 GNL1P36915 607 aaPredicted RBP20.04■□□□□ 0.8
TRIM47-205ENST00000587774 MYL6P60660 151 aa20.04■□□□□ 0.8
TRIM47-205ENST00000587774 SRSF5Q13243 272 aaKnown RBP20.04■□□□□ 0.8
TRIM47-205ENST00000587774 KCNB1Q14721 858 aa20.04■□□□□ 0.8
TRIM47-205ENST00000587774 PDGFRLQ15198 375 aa20.04■□□□□ 0.8
TRIM47-205ENST00000587774 PRR23BQ6ZRT6 265 aa20.04■□□□□ 0.8
TRIM47-205ENST00000587774 DENND5BQ6ZUT9 1274 aa20.04■□□□□ 0.8
TRIM47-205ENST00000587774 OR6B3Q8NGW1 331 aa20.04■□□□□ 0.8
TRIM47-205ENST00000587774 XYLT2Q9H1B5 865 aa20.04■□□□□ 0.8
TRIM47-205ENST00000587774 GMEB2Q9UKD1 530 aa20.04■□□□□ 0.8
TRIM47-205ENST00000587774 RAB23Q9ULC3 237 aa20.04■□□□□ 0.8
TRIM47-205ENST00000587774 WNT6Q9Y6F9 365 aa20.04■□□□□ 0.8
TRIM47-205ENST00000587774 F8VP50 259 aa20.03■□□□□ 0.8
TRIM47-205ENST00000587774 TRDMT1O14717 391 aaKnown RBP20.03■□□□□ 0.8
TRIM47-205ENST00000587774 TRIM66O15016 1216 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms