RNA–Protein interactions for RNA: ENST00000587197.1

DNMT1-212, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-212ENST00000587197 ELOVL4Q9GZR5 314 aa18.36■□□□□ 0.53
DNMT1-212ENST00000587197 MFSD1Q9H3U5 465 aa18.36■□□□□ 0.53
DNMT1-212ENST00000587197 UBE2TQ9NPD8 197 aaPredicted RBP18.36■□□□□ 0.53
DNMT1-212ENST00000587197 ABI2Q9NYB9 513 aaPredicted RBP18.36■□□□□ 0.53
DNMT1-212ENST00000587197 HMGXB4Q9UGU5 601 aa18.36■□□□□ 0.53
DNMT1-212ENST00000587197 DUSP12Q9UNI6 340 aa18.36■□□□□ 0.53
DNMT1-212ENST00000587197 ASB3Q9Y575 518 aa18.36■□□□□ 0.53
DNMT1-212ENST00000587197 RFX1P22670 979 aa18.35■□□□□ 0.53
DNMT1-212ENST00000587197 ALDH1A3P47895 512 aa18.35■□□□□ 0.53
DNMT1-212ENST00000587197 PABPC1LQ4VXU2 614 aaKnown RBP18.35■□□□□ 0.53
DNMT1-212ENST00000587197 MDH1BQ5I0G3 518 aa18.35■□□□□ 0.53
DNMT1-212ENST00000587197 RRAGAQ7L523 313 aa18.35■□□□□ 0.53
DNMT1-212ENST00000587197 ACOT1Q86TX2 421 aa18.35■□□□□ 0.53
DNMT1-212ENST00000587197 ELMOD1Q8N336 334 aa18.35■□□□□ 0.53
DNMT1-212ENST00000587197 KREMEN1Q96MU8 473 aa18.35■□□□□ 0.53
DNMT1-212ENST00000587197 ERGIC2Q96RQ1 377 aa18.35■□□□□ 0.53
DNMT1-212ENST00000587197 SIX2Q9NPC8 291 aa18.35■□□□□ 0.53
DNMT1-212ENST00000587197 PLCB1Q9NQ66 1216 aa18.35■□□□□ 0.53
DNMT1-212ENST00000587197 AVENQ9NQS1 362 aaPredicted RBP18.35■□□□□ 0.53
DNMT1-212ENST00000587197 FBXL21Q9UKT6 434 aa18.35■□□□□ 0.53
DNMT1-212ENST00000587197 CDH7Q9ULB5 785 aa18.35■□□□□ 0.53
DNMT1-212ENST00000587197 KIAA1257Q9ULG3 409 aa18.35■□□□□ 0.53
DNMT1-212ENST00000587197 CNTN6Q9UQ52 1028 aa18.35■□□□□ 0.53
DNMT1-212ENST00000587197 SLC27A5Q9Y2P5 690 aa18.35■□□□□ 0.53
DNMT1-212ENST00000587197 DAAM1Q9Y4D1 1078 aa18.35■□□□□ 0.53
DNMT1-212ENST00000587197 ATP8B3O60423 1300 aa18.34■□□□□ 0.53
DNMT1-212ENST00000587197 PTPN2P17706 415 aa18.34■□□□□ 0.53
DNMT1-212ENST00000587197 RAD23BP54727 409 aa18.34■□□□□ 0.53
DNMT1-212ENST00000587197 MFAP3P55082 362 aa18.34■□□□□ 0.53
DNMT1-212ENST00000587197 RPL10AP62906 217 aaKnown RBP18.34■□□□□ 0.53
DNMT1-212ENST00000587197 TWF1Q12792 350 aa18.34■□□□□ 0.53
DNMT1-212ENST00000587197 CCDC142Q17RM4 750 aa18.34■□□□□ 0.53
DNMT1-212ENST00000587197 MGAT5BQ3V5L5 792 aa18.34■□□□□ 0.53
DNMT1-212ENST00000587197 FILIP1LQ4L180 1135 aa18.34■□□□□ 0.53
DNMT1-212ENST00000587197 TTC9BQ8N6N2 239 aa18.34■□□□□ 0.53
DNMT1-212ENST00000587197 SLC4A11Q8NBS3 891 aa18.34■□□□□ 0.53
DNMT1-212ENST00000587197 KAT5Q92993 513 aa18.34■□□□□ 0.53
DNMT1-212ENST00000587197 TMEM176AQ96HP8 235 aa18.34■□□□□ 0.53
DNMT1-212ENST00000587197 HNRNPABQ99729 332 aaKnown RBP18.34■□□□□ 0.53
DNMT1-212ENST00000587197 B3GNT5Q9BYG0 378 aa18.34■□□□□ 0.53
DNMT1-212ENST00000587197 RTN4Q9NQC3 1192 aaKnown RBP18.34■□□□□ 0.53
DNMT1-212ENST00000587197 A0A1B0GTH6 734 aa18.33■□□□□ 0.52
DNMT1-212ENST00000587197 PAEPP09466 180 aa18.33■□□□□ 0.52
DNMT1-212ENST00000587197 CYP2F1P24903 491 aa18.33■□□□□ 0.52
DNMT1-212ENST00000587197 ZNF132P52740 706 aa18.33■□□□□ 0.52
DNMT1-212ENST00000587197 NUBP1P53384 320 aa18.33■□□□□ 0.52
DNMT1-212ENST00000587197 EPHB3P54753 998 aa18.33■□□□□ 0.52
DNMT1-212ENST00000587197 NTHL1P78549 312 aa18.33■□□□□ 0.52
DNMT1-212ENST00000587197 CYP27A1Q02318 531 aa18.33■□□□□ 0.52
DNMT1-212ENST00000587197 UBXN1Q04323 297 aa18.33■□□□□ 0.52
DNMT1-212ENST00000587197 KLHDC7AQ5VTJ3 777 aa18.33■□□□□ 0.52
DNMT1-212ENST00000587197 IQCEQ6IPM2 695 aa18.33■□□□□ 0.52
DNMT1-212ENST00000587197 MTSS1LQ765P7 747 aa18.33■□□□□ 0.52
DNMT1-212ENST00000587197 FUKQ8N0W3 1084 aa18.33■□□□□ 0.52
DNMT1-212ENST00000587197 SLC44A3Q8N4M1 653 aa18.33■□□□□ 0.52
DNMT1-212ENST00000587197 LEMD2Q8NC56 503 aa18.33■□□□□ 0.52
DNMT1-212ENST00000587197 SEPT5Q99719 369 aaPredicted RBP18.33■□□□□ 0.52
DNMT1-212ENST00000587197 ANP32EQ9BTT0 268 aa18.33■□□□□ 0.52
DNMT1-212ENST00000587197 CEP72Q9P209 647 aa18.33■□□□□ 0.52
DNMT1-212ENST00000587197 DNMT3BQ9UBC3 853 aaKnown RBP18.33■□□□□ 0.52
DNMT1-212ENST00000587197 SIK3Q9Y2K2 1263 aa18.33■□□□□ 0.52
DNMT1-212ENST00000587197 MRPS23Q9Y3D9 190 aaKnown RBP18.33■□□□□ 0.52
DNMT1-212ENST00000587197 ZNF197O14709 1029 aa18.32■□□□□ 0.52
DNMT1-212ENST00000587197 TRIM66O15016 1216 aa18.32■□□□□ 0.52
DNMT1-212ENST00000587197 BDNFP23560 247 aa18.32■□□□□ 0.52
DNMT1-212ENST00000587197 AVPR2P30518 371 aa18.32■□□□□ 0.52
DNMT1-212ENST00000587197 EPHA5P54756 1037 aa18.32■□□□□ 0.52
DNMT1-212ENST00000587197 ARHGAP17Q68EM7 881 aa18.32■□□□□ 0.52
DNMT1-212ENST00000587197 TMEM270Q6UE05 265 aa18.32■□□□□ 0.52
DNMT1-212ENST00000587197 PAQR9Q6ZVX9 377 aa18.32■□□□□ 0.52
DNMT1-212ENST00000587197 ITIH5Q86UX2 942 aa18.32■□□□□ 0.52
DNMT1-212ENST00000587197 C12orf29Q8N999 325 aa18.32■□□□□ 0.52
DNMT1-212ENST00000587197 SHC3Q92529 594 aa18.32■□□□□ 0.52
DNMT1-212ENST00000587197 FGF13Q92913 245 aa18.32■□□□□ 0.52
DNMT1-212ENST00000587197 PSMG2Q969U7 264 aa18.32■□□□□ 0.52
DNMT1-212ENST00000587197 CYFIP2Q96F07 1278 aa18.32■□□□□ 0.52
DNMT1-212ENST00000587197 SMARCD1Q96GM5 515 aa18.32■□□□□ 0.52
DNMT1-212ENST00000587197 SPATA17Q96L03 361 aa18.32■□□□□ 0.52
DNMT1-212ENST00000587197 C8orf48Q96LL4 319 aa18.32■□□□□ 0.52
DNMT1-212ENST00000587197 ZNF512Q96ME7 567 aaPredicted RBP18.32■□□□□ 0.52
DNMT1-212ENST00000587197 HEXIM2Q96MH2 286 aaKnown RBP18.32■□□□□ 0.52
DNMT1-212ENST00000587197 LPIN3Q9BQK8 851 aa18.32■□□□□ 0.52
DNMT1-212ENST00000587197 SMOC2Q9H3U7 446 aa18.32■□□□□ 0.52
DNMT1-212ENST00000587197 PCDHB4Q9Y5E5 795 aa18.32■□□□□ 0.52
DNMT1-212ENST00000587197 ANHXE9PGG2 379 aa18.31■□□□□ 0.52
DNMT1-212ENST00000587197 RHOP08100 348 aa18.31■□□□□ 0.52
DNMT1-212ENST00000587197 VDRP11473 427 aa18.31■□□□□ 0.52
DNMT1-212ENST00000587197 SRFP11831 508 aa18.31■□□□□ 0.52
DNMT1-212ENST00000587197 UCHL3P15374 230 aa18.31■□□□□ 0.52
DNMT1-212ENST00000587197 ATF6P18850 670 aa18.31■□□□□ 0.52
DNMT1-212ENST00000587197 FANCCQ00597 558 aa18.31■□□□□ 0.52
DNMT1-212ENST00000587197 APBA1Q02410 837 aa18.31■□□□□ 0.52
DNMT1-212ENST00000587197 ORC1Q13415 861 aa18.31■□□□□ 0.52
DNMT1-212ENST00000587197 VEPH1Q14D04 833 aa18.31■□□□□ 0.52
DNMT1-212ENST00000587197 SYCP1Q15431 976 aa18.31■□□□□ 0.52
DNMT1-212ENST00000587197 ZNF394Q53GI3 561 aa18.31■□□□□ 0.52
DNMT1-212ENST00000587197 CYP4A22Q5TCH4 519 aa18.31■□□□□ 0.52
DNMT1-212ENST00000587197 GJB7Q6PEY0 223 aa18.31■□□□□ 0.52
DNMT1-212ENST00000587197 FAM35AQ86V20 835 aa18.31■□□□□ 0.52
DNMT1-212ENST00000587197 RSAD2Q8WXG1 361 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms