RNA–Protein interactions for RNA: ENST00000587163.1

NPC1-205, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-205ENST00000587163 LRRC52Q8N7C0 313 aa17.52■□□□□ 0.4
NPC1-205ENST00000587163 SH3RF2Q8TEC5 729 aa17.52■□□□□ 0.4
NPC1-205ENST00000587163 EXOC4Q96A65 974 aa17.52■□□□□ 0.4
NPC1-205ENST00000587163 DNAJC19Q96DA6 116 aa17.52■□□□□ 0.4
NPC1-205ENST00000587163 EDEM2Q9BV94 578 aa17.52■□□□□ 0.4
NPC1-205ENST00000587163 MRPL44Q9H9J2 332 aaKnown RBP17.52■□□□□ 0.4
NPC1-205ENST00000587163 SNX9Q9Y5X1 595 aa17.52■□□□□ 0.4
NPC1-205ENST00000587163 K7EQS6 105 aa17.51■□□□□ 0.39
NPC1-205ENST00000587163 GABRDO14764 452 aa17.51■□□□□ 0.39
NPC1-205ENST00000587163 BMP15O95972 392 aa17.51■□□□□ 0.39
NPC1-205ENST00000587163 KRT19P08727 400 aa17.51■□□□□ 0.39
NPC1-205ENST00000587163 GBP1P32455 592 aa17.51■□□□□ 0.39
NPC1-205ENST00000587163 CASP5P51878 434 aa17.51■□□□□ 0.39
NPC1-205ENST00000587163 SEC13P55735 322 aa17.51■□□□□ 0.39
NPC1-205ENST00000587163 GAB4Q2WGN9 574 aa17.51■□□□□ 0.39
NPC1-205ENST00000587163 L1TD1Q5T7N2 865 aaKnown RBP17.51■□□□□ 0.39
NPC1-205ENST00000587163 LARP1BQ659C4 914 aaKnown RBP17.51■□□□□ 0.39
NPC1-205ENST00000587163 SPATA2LQ8IUW3 424 aaPredicted RBP17.51■□□□□ 0.39
NPC1-205ENST00000587163 USP33Q8TEY7 942 aa17.51■□□□□ 0.39
NPC1-205ENST00000587163 CACTINQ8WUQ7 758 aaKnown RBP17.51■□□□□ 0.39
NPC1-205ENST00000587163 ACDQ96AP0 544 aa17.51■□□□□ 0.39
NPC1-205ENST00000587163 ACCSQ96QU6 501 aa17.51■□□□□ 0.39
NPC1-205ENST00000587163 TPSD1Q9BZJ3 242 aa17.51■□□□□ 0.39
NPC1-205ENST00000587163 PDE11AQ9HCR9 933 aa17.51■□□□□ 0.39
NPC1-205ENST00000587163 RBAKQ9NYW8 714 aaPredicted RBP17.51■□□□□ 0.39
NPC1-205ENST00000587163 LNP1A1A4G5 178 aa17.5■□□□□ 0.39
NPC1-205ENST00000587163 HDCP19113 662 aa17.5■□□□□ 0.39
NPC1-205ENST00000587163 BCKDHBP21953 392 aa17.5■□□□□ 0.39
NPC1-205ENST00000587163 LMO2P25791 158 aa17.5■□□□□ 0.39
NPC1-205ENST00000587163 OPRD1P41143 372 aa17.5■□□□□ 0.39
NPC1-205ENST00000587163 LHX1P48742 406 aa17.5■□□□□ 0.39
NPC1-205ENST00000587163 NOVA1P51513 510 aaKnown RBP17.5■□□□□ 0.39
NPC1-205ENST00000587163 RBP5P82980 135 aa17.5■□□□□ 0.39
NPC1-205ENST00000587163 C2orf27AQ580R0 203 aa17.5■□□□□ 0.39
NPC1-205ENST00000587163 PMS2CLQ68D20 193 aa17.5■□□□□ 0.39
NPC1-205ENST00000587163 FAM171BQ6P995 826 aa17.5■□□□□ 0.39
NPC1-205ENST00000587163 ADGRF2Q8IZF7 708 aa17.5■□□□□ 0.39
NPC1-205ENST00000587163 TOP6BLQ8N6T0 577 aa17.5■□□□□ 0.39
NPC1-205ENST00000587163 TSTD1Q8NFU3 115 aa17.5■□□□□ 0.39
NPC1-205ENST00000587163 CBWD1Q9BRT8 395 aa17.5■□□□□ 0.39
NPC1-205ENST00000587163 FGFBP2Q9BYJ0 223 aa17.5■□□□□ 0.39
NPC1-205ENST00000587163 PCIF1Q9H4Z3 704 aa17.5■□□□□ 0.39
NPC1-205ENST00000587163 SEL1LQ9UBV2 794 aa17.5■□□□□ 0.39
NPC1-205ENST00000587163 ITGA11Q9UKX5 1188 aa17.5■□□□□ 0.39
NPC1-205ENST00000587163 EXOC7Q9UPT5 735 aa17.5■□□□□ 0.39
NPC1-205ENST00000587163 SMC3Q9UQE7 1217 aa17.5■□□□□ 0.39
NPC1-205ENST00000587163 CLIC4Q9Y696 253 aa17.5■□□□□ 0.39
NPC1-205ENST00000587163 NUP205Q92621 2012 aa17.49■□□□□ 0.39
NPC1-205ENST00000587163 PATE3B3GLJ2 98 aa17.49■□□□□ 0.39
NPC1-205ENST00000587163 GCNT3O95395 438 aa17.49■□□□□ 0.39
NPC1-205ENST00000587163 PROS1P07225 676 aa17.49■□□□□ 0.39
NPC1-205ENST00000587163 TCF3P15923 654 aa17.49■□□□□ 0.39
NPC1-205ENST00000587163 GARTP22102 1010 aa17.49■□□□□ 0.39
NPC1-205ENST00000587163 USP46P62068 366 aa17.49■□□□□ 0.39
NPC1-205ENST00000587163 NR1H3Q13133 447 aa17.49■□□□□ 0.39
NPC1-205ENST00000587163 KCNB1Q14721 858 aa17.49■□□□□ 0.39
NPC1-205ENST00000587163 ERICH6BQ5W0A0 696 aa17.49■□□□□ 0.39
NPC1-205ENST00000587163 LMBRD2Q68DH5 695 aaPredicted RBP17.49■□□□□ 0.39
NPC1-205ENST00000587163 LIMS2Q7Z4I7 341 aa17.49■□□□□ 0.39
NPC1-205ENST00000587163 BRAPQ7Z569 592 aa17.49■□□□□ 0.39
NPC1-205ENST00000587163 SFTPA1Q8IWL2 248 aa17.49■□□□□ 0.39
NPC1-205ENST00000587163 FSIP1Q8NA03 581 aa17.49■□□□□ 0.39
NPC1-205ENST00000587163 KBTBD7Q8WVZ9 684 aa17.49■□□□□ 0.39
NPC1-205ENST00000587163 FUBP3Q96I24 572 aaKnown RBP eCLIP17.49■□□□□ 0.39
NPC1-205ENST00000587163 MTMR12Q9C0I1 747 aa17.49■□□□□ 0.39
NPC1-205ENST00000587163 CRTAC1Q9NQ79 661 aa17.49■□□□□ 0.39
NPC1-205ENST00000587163 STK17AQ9UEE5 414 aa17.49■□□□□ 0.39
NPC1-205ENST00000587163 ARHGAP26Q9UNA1 814 aa17.49■□□□□ 0.39
NPC1-205ENST00000587163 WASF3Q9UPY6 502 aa17.49■□□□□ 0.39
NPC1-205ENST00000587163 PTPRJQ12913 1337 aa17.48■□□□□ 0.39
NPC1-205ENST00000587163 THADAQ6YHU6 1953 aa17.48■□□□□ 0.39
NPC1-205ENST00000587163 C1QTNF9BB2RNN3 333 aa17.48■□□□□ 0.39
NPC1-205ENST00000587163 CDX4O14627 284 aaPredicted RBP17.48■□□□□ 0.39
NPC1-205ENST00000587163 LDHAP00338 332 aaKnown RBP17.48■□□□□ 0.39
NPC1-205ENST00000587163 C1QTNF9P0C862 333 aa17.48■□□□□ 0.39
NPC1-205ENST00000587163 HNRNPLP14866 589 aaKnown RBP eCLIP17.48■□□□□ 0.39
NPC1-205ENST00000587163 GAP43P17677 238 aa17.48■□□□□ 0.39
NPC1-205ENST00000587163 BDNFP23560 247 aa17.48■□□□□ 0.39
NPC1-205ENST00000587163 PCSK1P29120 753 aa17.48■□□□□ 0.39
NPC1-205ENST00000587163 MAGEA11P43364 429 aa17.48■□□□□ 0.39
NPC1-205ENST00000587163 PSMC1P62191 440 aaKnown RBP17.48■□□□□ 0.39
NPC1-205ENST00000587163 USP39Q53GS9 565 aaKnown RBP17.48■□□□□ 0.39
NPC1-205ENST00000587163 SH3PXD2AQ5TCZ1 1133 aa17.48■□□□□ 0.39
NPC1-205ENST00000587163 ANO7Q6IWH7 933 aa17.48■□□□□ 0.39
NPC1-205ENST00000587163 RASSF3Q86WH2 238 aa17.48■□□□□ 0.39
NPC1-205ENST00000587163 CCDC33Q8N5R6 958 aa17.48■□□□□ 0.39
NPC1-205ENST00000587163 OR5B17Q8NGF7 314 aa17.48■□□□□ 0.39
NPC1-205ENST00000587163 SPATA18Q8TC71 538 aa17.48■□□□□ 0.39
NPC1-205ENST00000587163 NOC3LQ8WTT2 800 aaKnown RBP17.48■□□□□ 0.39
NPC1-205ENST00000587163 CLIC6Q96NY7 704 aa17.48■□□□□ 0.39
NPC1-205ENST00000587163 SYT15Q9BQS2 421 aa17.48■□□□□ 0.39
NPC1-205ENST00000587163 RNF38Q9H0F5 515 aa17.48■□□□□ 0.39
NPC1-205ENST00000587163 FBXO2Q9UK22 296 aaPredicted RBP17.48■□□□□ 0.39
NPC1-205ENST00000587163 HELZP42694 1942 aaKnown RBP17.48■□□□□ 0.39
NPC1-205ENST00000587163 LEFTY2O00292 366 aa17.47■□□□□ 0.39
NPC1-205ENST00000587163 KHNYNO15037 678 aaKnown RBP17.47■□□□□ 0.39
NPC1-205ENST00000587163 NFATC1O95644 943 aa17.47■□□□□ 0.39
NPC1-205ENST00000587163 TOP3BO95985 862 aaKnown RBP17.47■□□□□ 0.39
NPC1-205ENST00000587163 PDGFRBP09619 1106 aa17.47■□□□□ 0.39
NPC1-205ENST00000587163 SPINK2P20155 84 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms