RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 SGK1O00141 431 aa19.49■□□□□ 0.71
TOP3A-220ENST00000585031 PRPF40AO75400 957 aaKnown RBP19.49■□□□□ 0.71
TOP3A-220ENST00000585031 ITPKAP23677 461 aa19.49■□□□□ 0.71
TOP3A-220ENST00000585031 CYP2F1P24903 491 aa19.49■□□□□ 0.71
TOP3A-220ENST00000585031 SLC6A11P48066 632 aa19.49■□□□□ 0.71
TOP3A-220ENST00000585031 SLC12A3P55017 1021 aa19.49■□□□□ 0.71
TOP3A-220ENST00000585031 MAP7D1Q3KQU3 841 aa19.49■□□□□ 0.71
TOP3A-220ENST00000585031 THEM5Q8N1Q8 247 aa19.49■□□□□ 0.71
TOP3A-220ENST00000585031 SH3RF2Q8TEC5 729 aa19.49■□□□□ 0.71
TOP3A-220ENST00000585031 IPO9Q96P70 1041 aaKnown RBP19.49■□□□□ 0.71
TOP3A-220ENST00000585031 TIPINQ9BVW5 301 aa19.49■□□□□ 0.71
TOP3A-220ENST00000585031 PILRBQ9UKJ0 227 aa19.49■□□□□ 0.71
TOP3A-220ENST00000585031 DSEQ9UL01 958 aa19.49■□□□□ 0.71
TOP3A-220ENST00000585031 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.49■□□□□ 0.71
TOP3A-220ENST00000585031 PTPRBP23467 1997 aa19.49■□□□□ 0.71
TOP3A-220ENST00000585031 TISP43B9A030 160 aa19.48■□□□□ 0.71
TOP3A-220ENST00000585031 NOL4O94818 638 aa19.48■□□□□ 0.71
TOP3A-220ENST00000585031 CSH1P0DML2 217 aa19.48■□□□□ 0.71
TOP3A-220ENST00000585031 CSH2P0DML3 217 aa19.48■□□□□ 0.71
TOP3A-220ENST00000585031 LIG4P49917 911 aa19.48■□□□□ 0.71
TOP3A-220ENST00000585031 SMARCB1Q12824 385 aa19.48■□□□□ 0.71
TOP3A-220ENST00000585031 TMEM132DQ14C87 1099 aa19.48■□□□□ 0.71
TOP3A-220ENST00000585031 PEAR1Q5VY43 1037 aaPredicted RBP19.48■□□□□ 0.71
TOP3A-220ENST00000585031 KRT79Q5XKE5 535 aa19.48■□□□□ 0.71
TOP3A-220ENST00000585031 METTL23Q86XA0 190 aa19.48■□□□□ 0.71
TOP3A-220ENST00000585031 DEFB119Q8N690 84 aa19.48■□□□□ 0.71
TOP3A-220ENST00000585031 ALLCQ8N6M5 410 aa19.48■□□□□ 0.71
TOP3A-220ENST00000585031 SYT2Q8N9I0 419 aaPredicted RBP19.48■□□□□ 0.71
TOP3A-220ENST00000585031 IL17RCQ8NAC3 791 aa19.48■□□□□ 0.71
TOP3A-220ENST00000585031 CCDC26Q8TAB7 109 aa19.48■□□□□ 0.71
TOP3A-220ENST00000585031 KCNN1Q92952 543 aa19.48■□□□□ 0.71
TOP3A-220ENST00000585031 C8orf76Q96K31 380 aa19.48■□□□□ 0.71
TOP3A-220ENST00000585031 MYRFLQ96LU7 910 aa19.48■□□□□ 0.71
TOP3A-220ENST00000585031 CAMK1GQ96NX5 476 aa19.48■□□□□ 0.71
TOP3A-220ENST00000585031 TSPAN18Q96SJ8 248 aa19.48■□□□□ 0.71
TOP3A-220ENST00000585031 CCSER1Q9C0I3 900 aa19.48■□□□□ 0.71
TOP3A-220ENST00000585031 CACNA2D2Q9NY47 1150 aa19.48■□□□□ 0.71
TOP3A-220ENST00000585031 MAST4O15021 2626 aa19.47■□□□□ 0.71
TOP3A-220ENST00000585031 ANKRD63C9JTQ0 380 aa19.47■□□□□ 0.71
TOP3A-220ENST00000585031 HCRTO43612 131 aa19.47■□□□□ 0.71
TOP3A-220ENST00000585031 SEC24BO95487 1268 aa19.47■□□□□ 0.71
TOP3A-220ENST00000585031 PIGRP01833 764 aa19.47■□□□□ 0.71
TOP3A-220ENST00000585031 CKMP06732 381 aa19.47■□□□□ 0.71
TOP3A-220ENST00000585031 USP17L7P0C7H9 530 aa19.47■□□□□ 0.71
TOP3A-220ENST00000585031 CD59P13987 128 aa19.47■□□□□ 0.71
TOP3A-220ENST00000585031 ACOT2P49753 483 aa19.47■□□□□ 0.71
TOP3A-220ENST00000585031 TAF6P49848 677 aa19.47■□□□□ 0.71
TOP3A-220ENST00000585031 ZRSR1Q15695 479 aaKnown RBP19.47■□□□□ 0.71
TOP3A-220ENST00000585031 SPDYCQ5MJ68 293 aa19.47■□□□□ 0.71
TOP3A-220ENST00000585031 LPCAT2Q7L5N7 544 aa19.47■□□□□ 0.71
TOP3A-220ENST00000585031 TXNDC5Q8NBS9 432 aaKnown RBP19.47■□□□□ 0.71
TOP3A-220ENST00000585031 TRMT2BQ96GJ1 504 aaKnown RBP19.47■□□□□ 0.71
TOP3A-220ENST00000585031 PKMYT1Q99640 499 aa19.47■□□□□ 0.71
TOP3A-220ENST00000585031 MSTO1Q9BUK6 570 aa19.47■□□□□ 0.71
TOP3A-220ENST00000585031 IKZF4Q9H2S9 585 aa19.47■□□□□ 0.71
TOP3A-220ENST00000585031 TMEM206Q9H813 350 aa19.47■□□□□ 0.71
TOP3A-220ENST00000585031 DPP3Q9NY33 737 aa19.47■□□□□ 0.71
TOP3A-220ENST00000585031 CIZ1Q9ULV3 898 aaPredicted RBP19.47■□□□□ 0.71
TOP3A-220ENST00000585031 HNRNPDLO14979 420 aaKnown RBP19.46■□□□□ 0.71
TOP3A-220ENST00000585031 ADAM23O75077 832 aa19.46■□□□□ 0.71
TOP3A-220ENST00000585031 PAX3P23760 479 aa19.46■□□□□ 0.71
TOP3A-220ENST00000585031 HNRNPDQ14103 355 aaKnown RBP19.46■□□□□ 0.71
TOP3A-220ENST00000585031 HYIQ5T013 277 aa19.46■□□□□ 0.71
TOP3A-220ENST00000585031 CCNI2Q6ZMN8 369 aaPredicted RBP19.46■□□□□ 0.71
TOP3A-220ENST00000585031 DCP1BQ8IZD4 617 aaKnown RBP19.46■□□□□ 0.71
TOP3A-220ENST00000585031 FBXO18Q8NFZ0 1043 aa19.46■□□□□ 0.71
TOP3A-220ENST00000585031 ADAM32Q8TC27 787 aa19.46■□□□□ 0.71
TOP3A-220ENST00000585031 GTPBP2Q9BX10 602 aaKnown RBP19.46■□□□□ 0.71
TOP3A-220ENST00000585031 TRAV19A0A0A6YYK7 116 aa19.45■□□□□ 0.7
TOP3A-220ENST00000585031 KPNA7A9QM74 516 aa19.45■□□□□ 0.7
TOP3A-220ENST00000585031 MAP3K13O43283 966 aa19.45■□□□□ 0.7
TOP3A-220ENST00000585031 KLF8O95600 359 aaPredicted RBP19.45■□□□□ 0.7
TOP3A-220ENST00000585031 ACAT1P24752 427 aaKnown RBP19.45■□□□□ 0.7
TOP3A-220ENST00000585031 HOXD12P35452 270 aa19.45■□□□□ 0.7
TOP3A-220ENST00000585031 TIE1P35590 1138 aa19.45■□□□□ 0.7
TOP3A-220ENST00000585031 DPP6P42658 865 aa19.45■□□□□ 0.7
TOP3A-220ENST00000585031 TRAPPC10P48553 1259 aa19.45■□□□□ 0.7
TOP3A-220ENST00000585031 WNT7BP56706 349 aa19.45■□□□□ 0.7
TOP3A-220ENST00000585031 KYAT1Q16773 422 aa19.45■□□□□ 0.7
TOP3A-220ENST00000585031 OSTM1Q86WC4 334 aa19.45■□□□□ 0.7
TOP3A-220ENST00000585031 C12orf40Q86WS4 652 aa19.45■□□□□ 0.7
TOP3A-220ENST00000585031 CD302Q8IX05 232 aa19.45■□□□□ 0.7
TOP3A-220ENST00000585031 GLIS3Q8NEA6 775 aa19.45■□□□□ 0.7
TOP3A-220ENST00000585031 HNRNPLLQ8WVV9 542 aaKnown RBP19.45■□□□□ 0.7
TOP3A-220ENST00000585031 ADAMTS14Q8WXS8 1223 aa19.45■□□□□ 0.7
TOP3A-220ENST00000585031 FAM84AQ96KN4 292 aa19.45■□□□□ 0.7
TOP3A-220ENST00000585031 CCDC86Q9H6F5 360 aaKnown RBP19.45■□□□□ 0.7
TOP3A-220ENST00000585031 CAPN10Q9HC96 672 aa19.45■□□□□ 0.7
TOP3A-220ENST00000585031 SLC6A14Q9UN76 642 aa19.45■□□□□ 0.7
TOP3A-220ENST00000585031 DERAQ9Y315 318 aa19.45■□□□□ 0.7
TOP3A-220ENST00000585031 STK24Q9Y6E0 443 aa19.45■□□□□ 0.7
TOP3A-220ENST00000585031 KALRNO60229 2985 aa19.44■□□□□ 0.7
TOP3A-220ENST00000585031 URB1O60287 2271 aaKnown RBP19.44■□□□□ 0.7
TOP3A-220ENST00000585031 SCAMP3O14828 347 aaKnown RBP19.44■□□□□ 0.7
TOP3A-220ENST00000585031 CYP17A1P05093 508 aa19.44■□□□□ 0.7
TOP3A-220ENST00000585031 CFIP05156 583 aa19.44■□□□□ 0.7
TOP3A-220ENST00000585031 PLA2G4BP0C869 781 aa19.44■□□□□ 0.7
TOP3A-220ENST00000585031 TCF3P15923 654 aa19.44■□□□□ 0.7
TOP3A-220ENST00000585031 MRPS21P82921 87 aaKnown RBP19.44■□□□□ 0.7
TOP3A-220ENST00000585031 NR1H3Q13133 447 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms