RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 C2orf42Q9NWW7 574 aa21.85■■□□□ 1.09
TOP3A-219ENST00000584887 USP17L7P0C7H9 530 aa21.84■■□□□ 1.09
TOP3A-219ENST00000584887 ANXA13P27216 316 aa21.84■■□□□ 1.09
TOP3A-219ENST00000584887 TNNC1P63316 161 aa21.84■■□□□ 1.09
TOP3A-219ENST00000584887 GRSF1Q12849 480 aaKnown RBP eCLIP21.84■■□□□ 1.09
TOP3A-219ENST00000584887 SRSF5Q13243 272 aaKnown RBP21.84■■□□□ 1.09
TOP3A-219ENST00000584887 TRPC3Q13507 836 aa21.84■■□□□ 1.09
TOP3A-219ENST00000584887 CUL4BQ13620 913 aa21.84■■□□□ 1.09
TOP3A-219ENST00000584887 PKP1Q13835 747 aa21.84■■□□□ 1.09
TOP3A-219ENST00000584887 SIM2Q14190 667 aaPredicted RBP21.84■■□□□ 1.09
TOP3A-219ENST00000584887 PUM1Q14671 1186 aaKnown RBP eCLIP21.84■■□□□ 1.09
TOP3A-219ENST00000584887 KCNB1Q14721 858 aa21.84■■□□□ 1.09
TOP3A-219ENST00000584887 MTF1Q14872 753 aa21.84■■□□□ 1.09
TOP3A-219ENST00000584887 MAPRE1Q15691 268 aaKnown RBP21.84■■□□□ 1.09
TOP3A-219ENST00000584887 RSPO4Q2I0M5 234 aaPredicted RBP21.84■■□□□ 1.09
TOP3A-219ENST00000584887 MDH1BQ5I0G3 518 aa21.84■■□□□ 1.09
TOP3A-219ENST00000584887 RESP18Q5W5W9 173 aa21.84■■□□□ 1.09
TOP3A-219ENST00000584887 FSIP1Q8NA03 581 aa21.84■■□□□ 1.09
TOP3A-219ENST00000584887 OR6B3Q8NGW1 331 aa21.84■■□□□ 1.09
TOP3A-219ENST00000584887 MYRFLQ96LU7 910 aa21.84■■□□□ 1.09
TOP3A-219ENST00000584887 SLC22A12Q96S37 553 aa21.84■■□□□ 1.09
TOP3A-219ENST00000584887 CYP2S1Q96SQ9 504 aa21.84■■□□□ 1.09
TOP3A-219ENST00000584887 DMDP11532 3685 aa21.84■■□□□ 1.09
TOP3A-219ENST00000584887 OTOL1A6NHN0 477 aaPredicted RBP21.83■■□□□ 1.09
TOP3A-219ENST00000584887 SOBPA7XYQ1 873 aa21.83■■□□□ 1.09
TOP3A-219ENST00000584887 K7ESF4 209 aa21.83■■□□□ 1.09
TOP3A-219ENST00000584887 EXOC3O60645 756 aa21.83■■□□□ 1.09
TOP3A-219ENST00000584887 PHACTR2O75167 634 aa21.83■■□□□ 1.09
TOP3A-219ENST00000584887 PDIA4P13667 645 aaKnown RBP21.83■■□□□ 1.09
TOP3A-219ENST00000584887 GNL1P36915 607 aaPredicted RBP21.83■■□□□ 1.09
TOP3A-219ENST00000584887 DNM1Q05193 864 aaKnown RBP21.83■■□□□ 1.09
TOP3A-219ENST00000584887 FAM160A1Q05DH4 1040 aa21.83■■□□□ 1.09
TOP3A-219ENST00000584887 ZNF268Q14587 947 aaPredicted RBP21.83■■□□□ 1.09
TOP3A-219ENST00000584887 PDGFRLQ15198 375 aa21.83■■□□□ 1.09
TOP3A-219ENST00000584887 LIMS2Q7Z4I7 341 aa21.83■■□□□ 1.09
TOP3A-219ENST00000584887 SYNPOQ8N3V7 929 aa21.83■■□□□ 1.09
TOP3A-219ENST00000584887 GPR161Q8N6U8 529 aaKnown RBP21.83■■□□□ 1.09
TOP3A-219ENST00000584887 ARL14EPQ8N8R7 260 aaPredicted RBP21.83■■□□□ 1.09
TOP3A-219ENST00000584887 DUS2Q9NX74 493 aaKnown RBP21.83■■□□□ 1.09
TOP3A-219ENST00000584887 NXF1Q9UBU9 619 aaKnown RBP21.83■■□□□ 1.09
TOP3A-219ENST00000584887 CFAP45Q9UL16 551 aa21.83■■□□□ 1.09
TOP3A-219ENST00000584887 WNT6Q9Y6F9 365 aa21.83■■□□□ 1.09
TOP3A-219ENST00000584887 CACNA1AO00555 2505 aa21.83■■□□□ 1.09
TOP3A-219ENST00000584887 ATG2BQ96BY7 2078 aa21.83■■□□□ 1.08
TOP3A-219ENST00000584887 PVALEFA0A1B0GWK0 134 aa21.82■■□□□ 1.08
TOP3A-219ENST00000584887 C2orf78A6NCI8 922 aa21.82■■□□□ 1.08
TOP3A-219ENST00000584887 CST3P01034 146 aaPredicted RBP21.82■■□□□ 1.08
TOP3A-219ENST00000584887 HOXC13P31276 330 aa21.82■■□□□ 1.08
TOP3A-219ENST00000584887 IFNAR2P48551 515 aa21.82■■□□□ 1.08
TOP3A-219ENST00000584887 SNRPFP62306 86 aaKnown RBP21.82■■□□□ 1.08
TOP3A-219ENST00000584887 AMPD2Q01433 879 aa21.82■■□□□ 1.08
TOP3A-219ENST00000584887 EHHADHQ08426 723 aa21.82■■□□□ 1.08
TOP3A-219ENST00000584887 WDR72Q3MJ13 1102 aa21.82■■□□□ 1.08
TOP3A-219ENST00000584887 LAIR1Q6GTX8 287 aa21.82■■□□□ 1.08
TOP3A-219ENST00000584887 FSTL4Q6MZW2 842 aa21.82■■□□□ 1.08
TOP3A-219ENST00000584887 VSTM1Q6UX27 236 aa21.82■■□□□ 1.08
TOP3A-219ENST00000584887 CEP68Q76N32 757 aa21.82■■□□□ 1.08
TOP3A-219ENST00000584887 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.82■■□□□ 1.08
TOP3A-219ENST00000584887 LONP2Q86WA8 852 aa21.82■■□□□ 1.08
TOP3A-219ENST00000584887 CPA6Q8N4T0 437 aa21.82■■□□□ 1.08
TOP3A-219ENST00000584887 PCED1BQ96HM7 432 aa21.82■■□□□ 1.08
TOP3A-219ENST00000584887 SERTAD1Q9UHV2 236 aa21.82■■□□□ 1.08
TOP3A-219ENST00000584887 HRO43593 1189 aa21.81■■□□□ 1.08
TOP3A-219ENST00000584887 PAPSS2O95340 614 aaPredicted RBP21.81■■□□□ 1.08
TOP3A-219ENST00000584887 MYL6P60660 151 aa21.81■■□□□ 1.08
TOP3A-219ENST00000584887 SPEM2Q0P670 501 aa21.81■■□□□ 1.08
TOP3A-219ENST00000584887 BIRC3Q13489 604 aa21.81■■□□□ 1.08
TOP3A-219ENST00000584887 KNOP1Q1ED39 458 aaKnown RBP21.81■■□□□ 1.08
TOP3A-219ENST00000584887 BMT2Q1RMZ1 405 aa21.81■■□□□ 1.08
TOP3A-219ENST00000584887 TMEM196Q5HYL7 178 aa21.81■■□□□ 1.08
TOP3A-219ENST00000584887 PKN3Q6P5Z2 889 aa21.81■■□□□ 1.08
TOP3A-219ENST00000584887 MYCBPAPQ8TBZ2 947 aa21.81■■□□□ 1.08
TOP3A-219ENST00000584887 SH3RF2Q8TEC5 729 aa21.81■■□□□ 1.08
TOP3A-219ENST00000584887 EXOC1Q9NV70 894 aa21.81■■□□□ 1.08
TOP3A-219ENST00000584887 SDK1Q7Z5N4 2213 aa21.81■■□□□ 1.08
TOP3A-219ENST00000584887 SPTBN2O15020 2390 aa21.8■■□□□ 1.08
TOP3A-219ENST00000584887 F8VP50 259 aa21.8■■□□□ 1.08
TOP3A-219ENST00000584887 TRIM66O15016 1216 aa21.8■■□□□ 1.08
TOP3A-219ENST00000584887 EGFP01133 1207 aa21.8■■□□□ 1.08
TOP3A-219ENST00000584887 HDCP19113 662 aa21.8■■□□□ 1.08
TOP3A-219ENST00000584887 CASP4P49662 377 aa21.8■■□□□ 1.08
TOP3A-219ENST00000584887 USP46P62068 366 aa21.8■■□□□ 1.08
TOP3A-219ENST00000584887 LMNB2Q03252 620 aa21.8■■□□□ 1.08
TOP3A-219ENST00000584887 USP4Q13107 963 aa21.8■■□□□ 1.08
TOP3A-219ENST00000584887 ZNF77Q15935 545 aa21.8■■□□□ 1.08
TOP3A-219ENST00000584887 NAIF1Q69YI7 327 aaPredicted RBP21.8■■□□□ 1.08
TOP3A-219ENST00000584887 ATL3Q6DD88 541 aa21.8■■□□□ 1.08
TOP3A-219ENST00000584887 DENND5BQ6ZUT9 1274 aa21.8■■□□□ 1.08
TOP3A-219ENST00000584887 ZNF516Q92618 1163 aa21.8■■□□□ 1.08
TOP3A-219ENST00000584887 CHFRQ96EP1 664 aa21.8■■□□□ 1.08
TOP3A-219ENST00000584887 SPATA17Q96L03 361 aa21.8■■□□□ 1.08
TOP3A-219ENST00000584887 P2RY13Q9BPV8 354 aa21.8■■□□□ 1.08
TOP3A-219ENST00000584887 DPEP3Q9H4B8 488 aa21.8■■□□□ 1.08
TOP3A-219ENST00000584887 ECT2Q9H8V3 914 aa21.8■■□□□ 1.08
TOP3A-219ENST00000584887 PARD6AQ9NPB6 346 aa21.8■■□□□ 1.08
TOP3A-219ENST00000584887 TRPM5Q9NZQ8 1165 aa21.8■■□□□ 1.08
TOP3A-219ENST00000584887 CGNQ9P2M7 1197 aaKnown RBP21.8■■□□□ 1.08
TOP3A-219ENST00000584887 CDV3Q9UKY7 258 aaKnown RBP21.8■■□□□ 1.08
TOP3A-219ENST00000584887 TRDMT1O14717 391 aaKnown RBP21.79■■□□□ 1.08
TOP3A-219ENST00000584887 TACC1O75410 805 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms