RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 PDE2AO00408 941 aaPredicted RBP14.76□□□□□ -0.05
UBBP4-202ENST00000584755 XPO1O14980 1071 aaKnown RBP14.76□□□□□ -0.05
UBBP4-202ENST00000584755 GABBR2O75899 941 aa14.76□□□□□ -0.05
UBBP4-202ENST00000584755 BAIAP3O94812 1187 aa14.76□□□□□ -0.05
UBBP4-202ENST00000584755 ALDH2P05091 517 aa14.76□□□□□ -0.05
UBBP4-202ENST00000584755 NPR3P17342 541 aa14.76□□□□□ -0.05
UBBP4-202ENST00000584755 CTNNA1P35221 906 aaKnown RBP14.76□□□□□ -0.05
UBBP4-202ENST00000584755 SLC11A1P49279 550 aa14.76□□□□□ -0.05
UBBP4-202ENST00000584755 PEX5P50542 639 aa14.76□□□□□ -0.05
UBBP4-202ENST00000584755 SNX16P57768 344 aa14.76□□□□□ -0.05
UBBP4-202ENST00000584755 ITIH3Q06033 890 aa14.76□□□□□ -0.05
UBBP4-202ENST00000584755 CKAP4Q07065 602 aaKnown RBP14.76□□□□□ -0.05
UBBP4-202ENST00000584755 CCDC142Q17RM4 750 aa14.76□□□□□ -0.05
UBBP4-202ENST00000584755 MDH1BQ5I0G3 518 aa14.76□□□□□ -0.05
UBBP4-202ENST00000584755 INTS6LQ5JSJ4 861 aaKnown RBP14.76□□□□□ -0.05
UBBP4-202ENST00000584755 THEM5Q8N1Q8 247 aa14.76□□□□□ -0.05
UBBP4-202ENST00000584755 NIPA2Q8N8Q9 360 aa14.76□□□□□ -0.05
UBBP4-202ENST00000584755 ZNF689Q96CS4 500 aaPredicted RBP14.76□□□□□ -0.05
UBBP4-202ENST00000584755 PCED1BQ96HM7 432 aa14.76□□□□□ -0.05
UBBP4-202ENST00000584755 RPGRIP1Q96KN7 1286 aa14.76□□□□□ -0.05
UBBP4-202ENST00000584755 CARD9Q9H257 536 aa14.76□□□□□ -0.05
UBBP4-202ENST00000584755 SYNCQ9H7C4 482 aa14.76□□□□□ -0.05
UBBP4-202ENST00000584755 RC3H2Q9HBD1 1191 aaKnown RBP14.76□□□□□ -0.05
UBBP4-202ENST00000584755 ALPK3Q96L96 1907 aa14.75□□□□□ -0.05
UBBP4-202ENST00000584755 CCDC66A2RUB6 948 aa14.75□□□□□ -0.05
UBBP4-202ENST00000584755 TMEM110-MUSTN1A8MSY1 372 aa14.75□□□□□ -0.05
UBBP4-202ENST00000584755 EFCAB8A8MWE9 144 aa14.75□□□□□ -0.05
UBBP4-202ENST00000584755 KCNK3O14649 394 aa14.75□□□□□ -0.05
UBBP4-202ENST00000584755 TADA2AO75478 443 aa14.75□□□□□ -0.05
UBBP4-202ENST00000584755 GJB6O95452 261 aa14.75□□□□□ -0.05
UBBP4-202ENST00000584755 EFEMP2O95967 443 aa14.75□□□□□ -0.05
UBBP4-202ENST00000584755 GALTP07902 379 aa14.75□□□□□ -0.05
UBBP4-202ENST00000584755 KRT3P12035 628 aa14.75□□□□□ -0.05
UBBP4-202ENST00000584755 CXCR5P32302 372 aa14.75□□□□□ -0.05
UBBP4-202ENST00000584755 SCNN1AP37088 669 aa14.75□□□□□ -0.05
UBBP4-202ENST00000584755 ACADSBP45954 432 aa14.75□□□□□ -0.05
UBBP4-202ENST00000584755 YWHAHQ04917 246 aaPredicted RBP14.75□□□□□ -0.05
UBBP4-202ENST00000584755 ZNF252P-AS1Q0IIN9 211 aa14.75□□□□□ -0.05
UBBP4-202ENST00000584755 MRPL58Q14197 206 aaKnown RBP14.75□□□□□ -0.05
UBBP4-202ENST00000584755 FAM35AQ86V20 835 aa14.75□□□□□ -0.05
UBBP4-202ENST00000584755 CPNE8Q86YQ8 564 aa14.75□□□□□ -0.05
UBBP4-202ENST00000584755 ZDHHC17Q8IUH5 632 aa14.75□□□□□ -0.05
UBBP4-202ENST00000584755 RASGEF1CQ8N431 466 aa14.75□□□□□ -0.05
UBBP4-202ENST00000584755 MNS1Q8NEH6 495 aa14.75□□□□□ -0.05
UBBP4-202ENST00000584755 OR10T2Q8NGX3 314 aa14.75□□□□□ -0.05
UBBP4-202ENST00000584755 KCTD13Q8WZ19 329 aa14.75□□□□□ -0.05
UBBP4-202ENST00000584755 MCEEQ96PE7 176 aa14.75□□□□□ -0.05
UBBP4-202ENST00000584755 PSMB7Q99436 277 aa14.75□□□□□ -0.05
UBBP4-202ENST00000584755 SELENOOQ9BVL4 669 aa14.75□□□□□ -0.05
UBBP4-202ENST00000584755 IL23AQ9NPF7 189 aa14.75□□□□□ -0.05
UBBP4-202ENST00000584755 ST7Q9NRC1 585 aa14.75□□□□□ -0.05
UBBP4-202ENST00000584755 HCSTQ9UBK5 93 aa14.75□□□□□ -0.05
UBBP4-202ENST00000584755 FAN1Q9Y2M0 1017 aa14.75□□□□□ -0.05
UBBP4-202ENST00000584755 PCDHA3Q9Y5H8 950 aa14.75□□□□□ -0.05
UBBP4-202ENST00000584755 UQCRHLA0A096LP55 91 aa14.74□□□□□ -0.05
UBBP4-202ENST00000584755 CLDN5O00501 218 aa14.74□□□□□ -0.05
UBBP4-202ENST00000584755 PAPSS1O43252 624 aaPredicted RBP14.74□□□□□ -0.05
UBBP4-202ENST00000584755 SPOPO43791 374 aa14.74□□□□□ -0.05
UBBP4-202ENST00000584755 AMHP03971 560 aa14.74□□□□□ -0.05
UBBP4-202ENST00000584755 UQCRHP07919 91 aa14.74□□□□□ -0.05
UBBP4-202ENST00000584755 FGFR3P22607 806 aa14.74□□□□□ -0.05
UBBP4-202ENST00000584755 RFC1P35251 1148 aaPredicted RBP14.74□□□□□ -0.05
UBBP4-202ENST00000584755 RGS7P49802 495 aa14.74□□□□□ -0.05
UBBP4-202ENST00000584755 WDR5P61964 334 aaKnown RBP14.74□□□□□ -0.05
UBBP4-202ENST00000584755 OGDHQ02218 1023 aa14.74□□□□□ -0.05
UBBP4-202ENST00000584755 PIGHQ14442 188 aaPredicted RBP14.74□□□□□ -0.05
UBBP4-202ENST00000584755 MAPRE1Q15691 268 aaKnown RBP14.74□□□□□ -0.05
UBBP4-202ENST00000584755 PTPROQ16827 1216 aa14.74□□□□□ -0.05
UBBP4-202ENST00000584755 DCAF12L1Q5VU92 463 aa14.74□□□□□ -0.05
UBBP4-202ENST00000584755 DCUN1D2Q6PH85 259 aa14.74□□□□□ -0.05
UBBP4-202ENST00000584755 OLFML1Q6UWY5 402 aa14.74□□□□□ -0.05
UBBP4-202ENST00000584755 CLEC20AQ6ZU45 233 aa14.74□□□□□ -0.05
UBBP4-202ENST00000584755 FAM183BPQ6ZVS7 135 aa14.74□□□□□ -0.05
UBBP4-202ENST00000584755 RSRC2Q7L4I2 434 aaKnown RBP14.74□□□□□ -0.05
UBBP4-202ENST00000584755 ARCQ7LC44 396 aa14.74□□□□□ -0.05
UBBP4-202ENST00000584755 UBL4BQ8N7F7 174 aa14.74□□□□□ -0.05
UBBP4-202ENST00000584755 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.74□□□□□ -0.05
UBBP4-202ENST00000584755 ACTRT1Q8TDG2 376 aa14.74□□□□□ -0.05
UBBP4-202ENST00000584755 ALG3Q92685 438 aa14.74□□□□□ -0.05
UBBP4-202ENST00000584755 CAPZA3Q96KX2 299 aa14.74□□□□□ -0.05
UBBP4-202ENST00000584755 UBXN6Q9BZV1 441 aa14.74□□□□□ -0.05
UBBP4-202ENST00000584755 CWH43Q9H720 699 aa14.74□□□□□ -0.05
UBBP4-202ENST00000584755 CSNK1G1Q9HCP0 422 aa14.74□□□□□ -0.05
UBBP4-202ENST00000584755 TMEM59LQ9UK28 342 aa14.74□□□□□ -0.05
UBBP4-202ENST00000584755 TTC7AQ9ULT0 858 aaPredicted RBP14.74□□□□□ -0.05
UBBP4-202ENST00000584755 VWA8A3KMH1 1905 aa14.73□□□□□ -0.05
UBBP4-202ENST00000584755 SF3B1O75533 1304 aaKnown RBP eCLIP14.73□□□□□ -0.05
UBBP4-202ENST00000584755 CTAGE15A4D2H0 777 aa14.73□□□□□ -0.05
UBBP4-202ENST00000584755 GOLGA8SH3BPF8 625 aa14.73□□□□□ -0.05
UBBP4-202ENST00000584755 FAM200BP0CF97 657 aa14.73□□□□□ -0.05
UBBP4-202ENST00000584755 CTAGE8P0CG41 777 aa14.73□□□□□ -0.05
UBBP4-202ENST00000584755 SLC8A3P57103 927 aa14.73□□□□□ -0.05
UBBP4-202ENST00000584755 TUBB4BP68371 445 aa14.73□□□□□ -0.05
UBBP4-202ENST00000584755 SLC6A3Q01959 620 aa14.73□□□□□ -0.05
UBBP4-202ENST00000584755 ELAVL2Q12926 359 aaKnown RBP14.73□□□□□ -0.05
UBBP4-202ENST00000584755 CFAP221Q4G0U5 840 aa14.73□□□□□ -0.05
UBBP4-202ENST00000584755 FUT10Q6P4F1 479 aa14.73□□□□□ -0.05
UBBP4-202ENST00000584755 CTAGE6Q86UF2 777 aa14.73□□□□□ -0.05
UBBP4-202ENST00000584755 PIGZQ86VD9 579 aa14.73□□□□□ -0.05
UBBP4-202ENST00000584755 LRRTM3Q86VH5 581 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms