RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 SMOC1Q9H4F8 434 aa5.78□□□□□ -1.48
VAPA-207ENST00000583879 GDPD2Q9HCC8 539 aa5.78□□□□□ -1.48
VAPA-207ENST00000583879 FBRSL1Q9HCM7 1045 aaKnown RBP5.78□□□□□ -1.48
VAPA-207ENST00000583879 ZMYM5Q9UJ78 669 aa5.78□□□□□ -1.48
VAPA-207ENST00000583879 ZMIZ1Q9ULJ6 1067 aa5.78□□□□□ -1.48
VAPA-207ENST00000583879 UBQLN1Q9UMX0 589 aaKnown RBP5.78□□□□□ -1.48
VAPA-207ENST00000583879 CFAP47Q6ZTR5 3102 aa5.78□□□□□ -1.48
VAPA-207ENST00000583879 CACNA1BQ00975 2339 aa5.77□□□□□ -1.49
VAPA-207ENST00000583879 C4orf47A7E2U8 309 aa5.77□□□□□ -1.49
VAPA-207ENST00000583879 LACTBL1A8MY62 500 aa5.77□□□□□ -1.49
VAPA-207ENST00000583879 SHISA8B8ZZ34 492 aa5.77□□□□□ -1.49
VAPA-207ENST00000583879 GIPC1O14908 333 aa5.77□□□□□ -1.49
VAPA-207ENST00000583879 XPOTO43592 962 aaKnown RBP5.77□□□□□ -1.49
VAPA-207ENST00000583879 SOAT2O75908 522 aa5.77□□□□□ -1.49
VAPA-207ENST00000583879 PRAMEF12O95522 483 aa5.77□□□□□ -1.49
VAPA-207ENST00000583879 CAVIN2O95810 425 aa5.77□□□□□ -1.49
VAPA-207ENST00000583879 EGFP01133 1207 aa5.77□□□□□ -1.49
VAPA-207ENST00000583879 ADRB2P07550 413 aa5.77□□□□□ -1.49
VAPA-207ENST00000583879 CXCL8P10145 99 aa5.77□□□□□ -1.49
VAPA-207ENST00000583879 MAPTP10636 758 aaKnown RBP5.77□□□□□ -1.49
VAPA-207ENST00000583879 PLS3P13797 630 aa5.77□□□□□ -1.49
VAPA-207ENST00000583879 DRD1P21728 446 aa5.77□□□□□ -1.49
VAPA-207ENST00000583879 GUCY2CP25092 1073 aa5.77□□□□□ -1.49
VAPA-207ENST00000583879 COL8A1P27658 744 aa5.77□□□□□ -1.49
VAPA-207ENST00000583879 CDC25CP30307 473 aa5.77□□□□□ -1.49
VAPA-207ENST00000583879 ABL2P42684 1182 aa5.77□□□□□ -1.49
VAPA-207ENST00000583879 TRAPPC10P48553 1259 aa5.77□□□□□ -1.49
VAPA-207ENST00000583879 NOVA1P51513 510 aaKnown RBP5.77□□□□□ -1.49
VAPA-207ENST00000583879 SMTNP53814 917 aa5.77□□□□□ -1.49
VAPA-207ENST00000583879 CYP4F8P98187 520 aa5.77□□□□□ -1.49
VAPA-207ENST00000583879 GUCY1B3Q02153 619 aa5.77□□□□□ -1.49
VAPA-207ENST00000583879 CREB5Q02930 508 aa5.77□□□□□ -1.49
VAPA-207ENST00000583879 CLN3Q13286 438 aa5.77□□□□□ -1.49
VAPA-207ENST00000583879 COL9A2Q14055 689 aaPredicted RBP5.77□□□□□ -1.49
VAPA-207ENST00000583879 NOLC1Q14978 699 aaKnown RBP eCLIP5.77□□□□□ -1.49
VAPA-207ENST00000583879 VEPH1Q14D04 833 aa5.77□□□□□ -1.49
VAPA-207ENST00000583879 ELF2Q15723 593 aa5.77□□□□□ -1.49
VAPA-207ENST00000583879 TAF12Q16514 161 aa5.77□□□□□ -1.49
VAPA-207ENST00000583879 KYAT1Q16773 422 aa5.77□□□□□ -1.49
VAPA-207ENST00000583879 MGAT5BQ3V5L5 792 aa5.77□□□□□ -1.49
VAPA-207ENST00000583879 FBXO43Q4G163 708 aa5.77□□□□□ -1.49
VAPA-207ENST00000583879 TTC38Q5R3I4 469 aa5.77□□□□□ -1.49
VAPA-207ENST00000583879 DAB2IPQ5VWQ8 1189 aa5.77□□□□□ -1.49
VAPA-207ENST00000583879 SPATA1Q5VX52 437 aa5.77□□□□□ -1.49
VAPA-207ENST00000583879 KRT79Q5XKE5 535 aa5.77□□□□□ -1.49
VAPA-207ENST00000583879 UNQ6494/PRO21346Q6UXR6 183 aa5.77□□□□□ -1.49
VAPA-207ENST00000583879 CMTM8Q8IZV2 173 aa5.77□□□□□ -1.49
VAPA-207ENST00000583879 TTC9BQ8N6N2 239 aa5.77□□□□□ -1.49
VAPA-207ENST00000583879 TMEM161BQ8NDZ6 487 aa5.77□□□□□ -1.49
VAPA-207ENST00000583879 SNX29Q8TEQ0 813 aa5.77□□□□□ -1.49
VAPA-207ENST00000583879 CHFRQ96EP1 664 aa5.77□□□□□ -1.49
VAPA-207ENST00000583879 C8orf76Q96K31 380 aa5.77□□□□□ -1.49
VAPA-207ENST00000583879 LPIN3Q9BQK8 851 aa5.77□□□□□ -1.49
VAPA-207ENST00000583879 RUSC1Q9BVN2 902 aa5.77□□□□□ -1.49
VAPA-207ENST00000583879 RAB34Q9BZG1 259 aa5.77□□□□□ -1.49
VAPA-207ENST00000583879 HAPLN2Q9GZV7 340 aa5.77□□□□□ -1.49
VAPA-207ENST00000583879 SMG9Q9H0W8 520 aaKnown RBP5.77□□□□□ -1.49
VAPA-207ENST00000583879 DUSP15Q9H1R2 295 aaPredicted RBP5.77□□□□□ -1.49
VAPA-207ENST00000583879 EBF3Q9H4W6 596 aa5.77□□□□□ -1.49
VAPA-207ENST00000583879 HPS4Q9NQG7 708 aa5.77□□□□□ -1.49
VAPA-207ENST00000583879 POLR3BQ9NW08 1133 aaPredicted RBP5.77□□□□□ -1.49
VAPA-207ENST00000583879 ANKFY1Q9P2R3 1169 aa5.77□□□□□ -1.49
VAPA-207ENST00000583879 EBF1Q9UH73 591 aa5.77□□□□□ -1.49
VAPA-207ENST00000583879 GDF2Q9UK05 429 aaPredicted RBP5.77□□□□□ -1.49
VAPA-207ENST00000583879 WASF3Q9UPY6 502 aa5.77□□□□□ -1.49
VAPA-207ENST00000583879 EPG5Q9HCE0 2579 aa5.76□□□□□ -1.49
VAPA-207ENST00000583879 VWA8A3KMH1 1905 aa5.76□□□□□ -1.49
VAPA-207ENST00000583879 BCLAF3A2AJT9 711 aaKnown RBP5.76□□□□□ -1.49
VAPA-207ENST00000583879 PP2D1A8MPX8 630 aa5.76□□□□□ -1.49
VAPA-207ENST00000583879 PIK3R2O00459 728 aa5.76□□□□□ -1.49
VAPA-207ENST00000583879 PIRO00625 290 aa5.76□□□□□ -1.49
VAPA-207ENST00000583879 PPEF2O14830 753 aa5.76□□□□□ -1.49
VAPA-207ENST00000583879 KHNYNO15037 678 aaKnown RBP5.76□□□□□ -1.49
VAPA-207ENST00000583879 DCLK1O15075 740 aa5.76□□□□□ -1.49
VAPA-207ENST00000583879 CYP11A1P05108 521 aa5.76□□□□□ -1.49
VAPA-207ENST00000583879 HAPLN1P10915 354 aaPredicted RBP5.76□□□□□ -1.49
VAPA-207ENST00000583879 CEACAM1P13688 526 aa5.76□□□□□ -1.49
VAPA-207ENST00000583879 ATF6P18850 670 aa5.76□□□□□ -1.49
VAPA-207ENST00000583879 DDX6P26196 483 aaKnown RBP eCLIP5.76□□□□□ -1.49
VAPA-207ENST00000583879 CDC25AP30304 524 aa5.76□□□□□ -1.49
VAPA-207ENST00000583879 SOX11P35716 441 aa5.76□□□□□ -1.49
VAPA-207ENST00000583879 AVPR1AP37288 418 aa5.76□□□□□ -1.49
VAPA-207ENST00000583879 TNFSF9P41273 254 aa5.76□□□□□ -1.49
VAPA-207ENST00000583879 MATR3P43243 847 aaKnown RBP eCLIP5.76□□□□□ -1.49
VAPA-207ENST00000583879 GUCY2FP51841 1108 aa5.76□□□□□ -1.49
VAPA-207ENST00000583879 NEK4P51957 841 aa5.76□□□□□ -1.49
VAPA-207ENST00000583879 NLRP12P59046 1061 aa5.76□□□□□ -1.49
VAPA-207ENST00000583879 PPP2R3AQ06190 1150 aa5.76□□□□□ -1.49
VAPA-207ENST00000583879 ST3GAL1Q11201 340 aa5.76□□□□□ -1.49
VAPA-207ENST00000583879 SMARCB1Q12824 385 aa5.76□□□□□ -1.49
VAPA-207ENST00000583879 BFSP1Q12934 665 aa5.76□□□□□ -1.49
VAPA-207ENST00000583879 IL17AQ16552 155 aa5.76□□□□□ -1.49
VAPA-207ENST00000583879 SLC39A12Q504Y0 691 aa5.76□□□□□ -1.49
VAPA-207ENST00000583879 SH3PXD2AQ5TCZ1 1133 aa5.76□□□□□ -1.49
VAPA-207ENST00000583879 C9orf57Q5W0N0 161 aa5.76□□□□□ -1.49
VAPA-207ENST00000583879 TRIM68Q6AZZ1 485 aa5.76□□□□□ -1.49
VAPA-207ENST00000583879 TCEAL6Q6IPX3 200 aa5.76□□□□□ -1.49
VAPA-207ENST00000583879 CC2D1AQ6P1N0 951 aaPredicted RBP5.76□□□□□ -1.49
VAPA-207ENST00000583879 SYT13Q7L8C5 426 aa5.76□□□□□ -1.49
VAPA-207ENST00000583879 KCNK18Q7Z418 384 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 412.1 ms